MapMan terms associated with a binding site
- Binding site
- Motif_282
- Name
- D4GMAUX28
- Description
- D4; DNase I protected sequence found in the soybean auxin responsive gene, Aux28, promoter; D1 and D4 share a very similar core sequence TAGTXXCTGT and TAGTXCTGT, respectively; D1/D4-like sequence were identified in several other auxin-responsive genes
- #Associated genes
- 50
- #Associated MapMan terms
- 41
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MapMan | Description | #Associated genes | ath | bra | cme | egr | gma | ptr | ppe | sly | stu | vvi |
---|---|---|---|---|---|---|---|---|---|---|---|---|
27 | RNA | 11 (22.00%) | 0 | 1 | 0 | 0 | 7 | 1 | 0 | 2 | 0 | 0 |
27.3 | RNA.regulation of transcription | 10 (20.00%) | 0 | 1 | 0 | 0 | 6 | 1 | 0 | 2 | 0 | 0 |
29 | protein | 7 (14.00%) | 0 | 0 | 0 | 1 | 2 | 1 | 2 | 0 | 0 | 1 |
29.4 | protein.postranslational modification | 5 (10.00%) | 0 | 0 | 0 | 1 | 2 | 0 | 1 | 0 | 0 | 1 |
30 | signalling | 5 (10.00%) | 0 | 1 | 0 | 0 | 2 | 1 | 0 | 0 | 0 | 1 |
27.3.25 | RNA.regulation of transcription.MYB domain transcription factor family | 3 (6.00%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 2 | 0 | 0 |
27.3.8 | RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family | 3 (6.00%) | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 |
26 | misc | 2 (4.00%) | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
26.21 | misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | 2 (4.00%) | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
27.3.67 | RNA.regulation of transcription.putative transcription regulator | 2 (4.00%) | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 |
30.3 | signalling.calcium | 2 (4.00%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 |
30.5 | signalling.G-proteins | 2 (4.00%) | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
33 | development | 2 (4.00%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 |
33.99 | development.unspecified | 2 (4.00%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 |
34 | transport | 2 (4.00%) | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 |
34.9 | transport.metabolite transporters at the mitochondrial membrane | 2 (4.00%) | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 |
10 | cell wall | 1 (2.00%) | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
10.6 | cell wall.degradation | 1 (2.00%) | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
10.6.3 | cell wall.degradation.pectate lyases and polygalacturonases | 1 (2.00%) | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
15 | metal handling | 1 (2.00%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
15.2 | metal handling.binding, chelation and storage | 1 (2.00%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
17 | hormone metabolism | 1 (2.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
17.2 | hormone metabolism.auxin | 1 (2.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
17.2.3 | hormone metabolism.auxin.induced-regulated-responsive-activated | 1 (2.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
20 | stress | 1 (2.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
20.1 | stress.biotic | 1 (2.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
21 | redox | 1 (2.00%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
21.4 | redox.glutaredoxins | 1 (2.00%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
27.1 | RNA.processing | 1 (2.00%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
27.3.11 | RNA.regulation of transcription.C2H2 zinc finger family | 1 (2.00%) | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
27.3.35 | RNA.regulation of transcription.bZIP transcription factor family | 1 (2.00%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
29.3 | protein.targeting | 1 (2.00%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
29.3.4 | protein.targeting.secretory pathway | 1 (2.00%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
29.3.4.99 | protein.targeting.secretory pathway.unspecified | 1 (2.00%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
29.5 | protein.degradation | 1 (2.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
29.5.11.4.3.2 | protein.degradation.ubiquitin.E3.SCF.FBOX | 1 (2.00%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
29.5.7 | protein.degradation.metalloprotease | 1 (2.00%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
30.4 | signalling.phosphinositides | 1 (2.00%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
30.4.1 | signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase | 1 (2.00%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
31 | cell | 1 (2.00%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
31.1 | cell.organisation | 1 (2.00%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |