PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Motif_260
Name: MYB98
Description: MYB98 positively regulates a battery of synergid-expressed genes encoding filiform apparatus localized proteins

#Associated genes: 117
#Associated MapMan terms: 82

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	28 (23.93%)	1	1	2	4	5	11	1	3
27.3	RNA.regulation of transcription	15 (12.82%)	1	1	2	4	1	2	1	3
27.4	RNA.RNA binding	11 (9.40%)	0	0	0	0	2	9	0	0
29	protein	9 (7.69%)	1	0	2	3	0	0	0	3
26	misc	6 (5.13%)	0	0	1	3	2	0	0	0
30	signalling	5 (4.27%)	0	0	0	2	0	1	1	1
31	cell	5 (4.27%)	0	0	0	0	1	0	3	1
10	cell wall	4 (3.42%)	1	0	0	1	1	0	1	0
27.3.99	RNA.regulation of transcription.unclassified	4 (3.42%)	0	0	0	1	0	1	0	2
29.5	protein.degradation	4 (3.42%)	1	0	1	1	0	0	0	1
1	PS	3 (2.56%)	0	0	0	0	1	0	2	0
17	hormone metabolism	3 (2.56%)	0	0	0	2	0	1	0	0
26.4	misc.beta 1,3 glucan hydrolases	3 (2.56%)	0	0	0	2	1	0	0	0
29.2.1.2.2.57	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A	3 (2.56%)	0	0	1	1	0	1	0	0
29.4	protein.postranslational modification	3 (2.56%)	0	0	0	2	0	0	0	1
30.11	signalling.light	3 (2.56%)	0	0	0	0	0	1	1	1
34	transport	3 (2.56%)	0	1	0	0	1	1	0	0
1.1	PS.lightreaction	2 (1.71%)	0	0	0	0	0	0	2	0
1.1.3	PS.lightreaction.cytochrome b6/f	2 (1.71%)	0	0	0	0	0	0	2	0
1.1.3.4	PS.lightreaction.cytochrome b6/f.apocytochrome f (CYF)	2 (1.71%)	0	0	0	0	0	0	2	0
3	minor CHO metabolism	2 (1.71%)	0	1	0	0	0	0	0	1
10.6	cell wall.degradation	2 (1.71%)	1	0	0	1	0	0	0	0
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	2 (1.71%)	1	0	0	1	0	0	0	0
17.5	hormone metabolism.ethylene	2 (1.71%)	0	0	0	2	0	0	0	0
17.5.3	hormone metabolism.ethylene.induced-regulated-responsive-activated	2 (1.71%)	0	0	0	2	0	0	0	0
26.2	misc.UDP glucosyl and glucoronyl transferases	2 (1.71%)	0	0	0	1	1	0	0	0
27.1	RNA.processing	2 (1.71%)	0	0	0	0	2	0	0	0
27.1.1	RNA.processing.splicing	2 (1.71%)	0	0	0	0	2	0	0	0
28	DNA	2 (1.71%)	0	1	0	0	0	1	0	0
28.1	DNA.synthesis/chromatin structure	2 (1.71%)	0	1	0	0	0	1	0	0
29.5.11	protein.degradation.ubiquitin	2 (1.71%)	1	0	0	1	0	0	0	0
29.5.11.20	protein.degradation.ubiquitin.proteasom	2 (1.71%)	1	0	0	1	0	0	0	0
30.3	signalling.calcium	2 (1.71%)	0	0	0	2	0	0	0	0
31.3	cell.cycle	2 (1.71%)	0	0	0	0	1	0	1	0
31.4	cell.vesicle transport	2 (1.71%)	0	0	0	0	0	0	1	1
33	development	2 (1.71%)	0	1	0	1	0	0	0	0
33.99	development.unspecified	2 (1.71%)	0	1	0	1	0	0	0	0
1.3	PS.calvin cycle	1 (0.85%)	0	0	0	0	1	0	0	0
1.3.6	PS.calvin cycle.aldolase	1 (0.85%)	0	0	0	0	1	0	0	0
10.2	cell wall.cellulose synthesis	1 (0.85%)	0	0	0	0	0	0	1	0
10.2.1	cell wall.cellulose synthesis.cellulose synthase	1 (0.85%)	0	0	0	0	0	0	1	0
3.2	minor CHO metabolism.trehalose	1 (0.85%)	0	0	0	0	0	0	0	1
10.3	cell wall.hemicellulose synthesis	1 (0.85%)	0	0	0	0	1	0	0	0
11.9	lipid metabolism.lipid degradation	1 (0.85%)	0	0	0	0	1	0	0	0
11.9.2	lipid metabolism.lipid degradation.lipases	1 (0.85%)	0	0	0	0	1	0	0	0
12.2	N-metabolism.ammonia metabolism	1 (0.85%)	0	0	0	0	0	0	0	1
12.2.2	N-metabolism.ammonia metabolism.glutamine synthetase	1 (0.85%)	0	0	0	0	0	0	0	1
17.2	hormone metabolism.auxin	1 (0.85%)	0	0	0	0	0	1	0	0
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	1 (0.85%)	0	0	0	0	0	1	0	0
3.2.1	minor CHO metabolism.trehalose.TPS	1 (0.85%)	0	0	0	0	0	0	0	1
3.2.3	minor CHO metabolism.trehalose.potential TPS/TPP	1 (0.85%)	0	0	0	0	0	0	0	1
3.5	minor CHO metabolism.others	1 (0.85%)	0	1	0	0	0	0	0	0
11	lipid metabolism	1 (0.85%)	0	0	0	0	1	0	0	0
12	N-metabolism	1 (0.85%)	0	0	0	0	0	0	0	1
23	nucleotide metabolism	1 (0.85%)	0	0	0	1	0	0	0	0
23.3	nucleotide metabolism.salvage	1 (0.85%)	0	0	0	1	0	0	0	0
23.3.2	nucleotide metabolism.salvage.nucleoside kinases	1 (0.85%)	0	0	0	1	0	0	0	0
23.3.2.3	nucleotide metabolism.salvage.nucleoside kinases.thymidine kinase	1 (0.85%)	0	0	0	1	0	0	0	0
26.10	misc.cytochrome P450	1 (0.85%)	0	0	1	0	0	0	0	0
27.3.14	RNA.regulation of transcription.CCAAT box binding factor family, HAP2	1 (0.85%)	0	0	0	0	0	0	1	0
27.3.15	RNA.regulation of transcription.CCAAT box binding factor family, HAP3	1 (0.85%)	0	0	1	0	0	0	0	0
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	1 (0.85%)	0	0	0	0	0	1	0	0
27.3.23	RNA.regulation of transcription.HSF,Heat-shock transcription factor family	1 (0.85%)	0	0	0	1	0	0	0	0
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	1 (0.85%)	0	0	0	0	0	0	0	1
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	1 (0.85%)	0	0	1	0	0	0	0	0
27.3.26	RNA.regulation of transcription.MYB-related transcription factor family	1 (0.85%)	0	0	0	1	0	0	0	0
27.3.27	RNA.regulation of transcription.NAC domain transcription factor family	1 (0.85%)	1	0	0	0	0	0	0	0
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	1 (0.85%)	0	0	0	1	0	0	0	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	1 (0.85%)	0	0	0	0	1	0	0	0
27.3.80	RNA.regulation of transcription.zf-HD	1 (0.85%)	0	1	0	0	0	0	0	0
29.1	protein.aa activation	1 (0.85%)	0	0	0	0	0	0	0	1
29.1.22	protein.aa activation.asparagine-tRNA ligase	1 (0.85%)	0	0	0	0	0	0	0	1
29.2.1.1.1.2.33	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L33	1 (0.85%)	0	0	0	0	1	0	0	0
29.2.1.2.1.18	protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S18	1 (0.85%)	0	1	0	0	0	0	0	0
29.5.1	protein.degradation.subtilases	1 (0.85%)	0	0	0	0	0	0	0	1
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	1 (0.85%)	0	0	0	0	0	1	0	0
29.5.5	protein.degradation.serine protease	1 (0.85%)	0	0	1	0	0	0	0	0
29.6	protein.folding	1 (0.85%)	0	0	1	0	0	0	0	0
31.1	cell.organisation	1 (0.85%)	0	0	0	0	0	0	1	0
34.2	transport.sugars	1 (0.85%)	0	0	0	0	1	0	0	0
34.3	transport.amino acids	1 (0.85%)	0	1	0	0	0	0	0	0
34.99	transport.misc	1 (0.85%)	0	0	0	0	0	1	0	0