MapMan terms associated with a binding site

Binding site
Motif_250
Name
ACGTOSGLUB1
Description
ACGT motif found in GluB-1 gene in rice; Required for endosperm-specific expression; Conserved in the 5'-flanking region of glutelin genes; Combination of GCN4, AACA and ACGT motifs was found sufficient to confer a detectable level of endosperm expression
#Associated genes
809
#Associated MapMan terms
235

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MapMan Description #Associated genes ath bra cme egr gma ptr ppe sly stu vvi
27RNA145 (17.92%)16120133830184014
27.3RNA.regulation of transcription133 (16.44%)15120123626174011
29protein61 (7.54%)460313159407
33development50 (6.18%)640512133205
30signalling45 (5.56%)35061169203
33.99development.unspecified42 (5.19%)44058132204
17hormone metabolism36 (4.45%)730010124000
29.4protein.postranslational modification34 (4.20%)3401756206
27.3.25RNA.regulation of transcription.MYB domain transcription factor family32 (3.96%)23031083003
34transport31 (3.83%)30021155104
26misc28 (3.46%)1407831202
30.2signalling.receptor kinases26 (3.21%)3403346201
20stress22 (2.72%)4004371003
10cell wall18 (2.22%)3101361003
30.2.11signalling.receptor kinases.leucine rich repeat XI18 (2.22%)0302325201
17.2hormone metabolism.auxin17 (2.10%)2300561000
29.5protein.degradation17 (2.10%)1101661100
31cell17 (2.10%)1200651002
16secondary metabolism15 (1.85%)3101322201
20.2stress.abiotic15 (1.85%)2003061003
27.3.3RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family14 (1.73%)1001622101
3minor CHO metabolism13 (1.61%)1002161101
11lipid metabolism12 (1.48%)1100521101
17.5hormone metabolism.ethylene12 (1.48%)2000352000
29.5.11.4.2protein.degradation.ubiquitin.E3.RING12 (1.48%)2202132000
17.2.3hormone metabolism.auxin.induced-regulated-responsive-activated11 (1.36%)1100441000
27.3.11RNA.regulation of transcription.C2H2 zinc finger family11 (1.36%)1200314000
27.3.32RNA.regulation of transcription.WRKY domain transcription factor family9 (1.11%)2100510000
27.3.67RNA.regulation of transcription.putative transcription regulator9 (1.11%)1301211000
28DNA9 (1.11%)2100042000
1PS8 (0.99%)0000311102
10.8cell wall.pectin*esterases8 (0.99%)0000241001
10.8.1cell wall.pectin*esterases.PME8 (0.99%)0000241001
16.2secondary metabolism.phenylpropanoids8 (0.99%)1101120200
26.10misc.cytochrome P4508 (0.99%)1102300001
26.22misc.short chain dehydrogenase/reductase (SDR)8 (0.99%)0202200101
27.3.22RNA.regulation of transcription.HB,Homeobox transcription factor family8 (0.99%)2001300002
29.4.1protein.postranslational modification.kinase8 (0.99%)0100301102
31.3cell.cycle8 (0.99%)1000510001
1.1PS.lightreaction7 (0.87%)0000211102
3.1minor CHO metabolism.raffinose family7 (0.87%)0001031101
20.1stress.biotic7 (0.87%)2001310000
20.2.99stress.abiotic.unspecified7 (0.87%)1002010003
27.3.99RNA.regulation of transcription.unclassified7 (0.87%)0000032101
27.4RNA.RNA binding7 (0.87%)0001121002
28.1DNA.synthesis/chromatin structure7 (0.87%)2100031000
29.4.1.57protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII7 (0.87%)0100301101
31.1cell.organisation7 (0.87%)0100131001
34.21transport.calcium7 (0.87%)0001122001
11.4lipid metabolism.TAG synthesis6 (0.74%)0100211100
11.9lipid metabolism.lipid degradation6 (0.74%)1000310001
17.2.2hormone metabolism.auxin.signal transduction6 (0.74%)1200120000
17.5.1hormone metabolism.ethylene.synthesis-degradation6 (0.74%)1000131000
24Biodegradation of Xenobiotics6 (0.74%)0101310000
24.2Biodegradation of Xenobiotics.lactoylglutathione lyase6 (0.74%)0101310000
30.5signalling.G-proteins6 (0.74%)0001301001
9mitochondrial electron transport / ATP synthesis5 (0.62%)0100000301
10.7cell wall.modification5 (0.62%)1100110001
17.5.2hormone metabolism.ethylene.signal transduction5 (0.62%)0000221000
27.3.20RNA.regulation of transcription.G2-like transcription factor family, GARP5 (0.62%)0001210001
27.3.24RNA.regulation of transcription.MADS box transcription factor family5 (0.62%)0001110002
27.3.35RNA.regulation of transcription.bZIP transcription factor family5 (0.62%)3100100000
29.5.7protein.degradation.metalloprotease5 (0.62%)0000121100
30.3signalling.calcium5 (0.62%)0002120000
34.19transport.Major Intrinsic Proteins5 (0.62%)1000300100
34.19.2transport.Major Intrinsic Proteins.TIP5 (0.62%)1000300100
10.6cell wall.degradation4 (0.49%)2001010000
11.9.2lipid metabolism.lipid degradation.lipases4 (0.49%)1000110001
11.9.2.1lipid metabolism.lipid degradation.lipases.triacylglycerol lipase4 (0.49%)1000110001
17.4hormone metabolism.cytokinin4 (0.49%)1000111000
27.1RNA.processing4 (0.49%)1000020001
29.3protein.targeting4 (0.49%)0100011100
29.8protein.assembly and cofactor ligation4 (0.49%)0001021000
3.1.2minor CHO metabolism.raffinose family.raffinose synthases4 (0.49%)0000020101
3.1.2.2minor CHO metabolism.raffinose family.raffinose synthases.putative4 (0.49%)0000020101
21redox4 (0.49%)0000022000
23nucleotide metabolism4 (0.49%)1001002000
33.2development.late embryogenesis abundant4 (0.49%)2000101000
34.99transport.misc4 (0.49%)0001210000
1.1.40PS.lightreaction.cyclic electron flow-chlororespiration3 (0.37%)0000000102
10.6.3cell wall.degradation.pectate lyases and polygalacturonases3 (0.37%)2001000000
3.2minor CHO metabolism.trehalose3 (0.37%)1000110000
15metal handling3 (0.37%)0001200000
15.2metal handling.binding, chelation and storage3 (0.37%)0001200000
16.1secondary metabolism.isoprenoids3 (0.37%)2000001000
16.2.1secondary metabolism.phenylpropanoids.lignin biosynthesis3 (0.37%)1100010000
17.4.1hormone metabolism.cytokinin.synthesis-degradation3 (0.37%)1000110000
20.1.7stress.biotic.PR-proteins3 (0.37%)0000300000
20.2.1stress.abiotic.heat3 (0.37%)0001011000
26.12misc.peroxidases3 (0.37%)0003000000
26.21misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein3 (0.37%)0100101000
27.3.23RNA.regulation of transcription.HSF,Heat-shock transcription factor family3 (0.37%)0001011000
27.3.37RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family3 (0.37%)0001101000
27.3.5RNA.regulation of transcription.ARR3 (0.37%)0000110100
27.3.60RNA.regulation of transcription.NIN-like bZIP-related family3 (0.37%)0000102000
29.3.2protein.targeting.mitochondria3 (0.37%)0000011100
29.5.11protein.degradation.ubiquitin3 (0.37%)0000210000
29.5.3protein.degradation.cysteine protease3 (0.37%)0000210000
29.5.5protein.degradation.serine protease3 (0.37%)1001010000
3.1.1minor CHO metabolism.raffinose family.galactinol synthases3 (0.37%)0001011000
3.1.1.2minor CHO metabolism.raffinose family.galactinol synthases.putative3 (0.37%)0001011000
3.2.2minor CHO metabolism.trehalose.TPP3 (0.37%)1000110000
30.11signalling.light3 (0.37%)0000101001
30.2.17signalling.receptor kinases.DUF 263 (0.37%)0101010000
33.3development.squamosa promoter binding like (SPL)3 (0.37%)0000200001
34.12transport.metal3 (0.37%)0000300000
1.1.1PS.lightreaction.photosystem II2 (0.25%)0000011000
1.1.1.1PS.lightreaction.photosystem II.LHC-II2 (0.25%)0000011000
1.1.5PS.lightreaction.other electron carrier (ox/red)2 (0.25%)0000200000
1.1.5.3PS.lightreaction.other electron carrier (ox/red).ferredoxin reductase2 (0.25%)0000200000
6gluconeogenesis / glyoxylate cycle2 (0.25%)0100100000
8TCA / org transformation2 (0.25%)0000001001
11.9.3lipid metabolism.lipid degradation.lysophospholipases2 (0.25%)0000200000
11.9.3.2lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase2 (0.25%)0000200000
3.5minor CHO metabolism.others2 (0.25%)0001010000
6.5gluconeogenesis / glyoxylate cycle.pyruvate dikinase2 (0.25%)0100100000
8.2TCA / org transformation.other organic acid transformations2 (0.25%)0000001001
9.1mitochondrial electron transport / ATP synthesis.NADH-DH2 (0.25%)0000000101
9.6mitochondrial electron transport / ATP synthesis.cytochrome c2 (0.25%)0000000200
13amino acid metabolism2 (0.25%)0000020000
17.3hormone metabolism.brassinosteroid2 (0.25%)2000000000
8.2.10TCA / org transformation.other organic acid transformatons.malic2 (0.25%)0000001001
9.1.2mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear2 (0.25%)0000000101
18Co-factor and vitamine metabolism2 (0.25%)1000010000
20.2.2stress.abiotic.cold2 (0.25%)1000010000
20.2.3stress.abiotic.drought/salt2 (0.25%)0000020000
22polyamine metabolism2 (0.25%)0000200000
22.1polyamine metabolism.synthesis2 (0.25%)0000200000
22.1.2polyamine metabolism.synthesis.SAM decarboxylase2 (0.25%)0000200000
23.3nucleotide metabolism.salvage2 (0.25%)0001001000
23.3.1nucleotide metabolism.salvage.phosphoribosyltransferases2 (0.25%)0001001000
26.2misc.UDP glucosyl and glucoronyl transferases2 (0.25%)0000100100
26.28misc.GDSL-motif lipase2 (0.25%)0000110000
27.3.1RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family2 (0.25%)0100000100
27.3.21RNA.regulation of transcription.GRAS transcription factor family2 (0.25%)0001010000
27.3.6RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family2 (0.25%)0000011000
28.99DNA.unspecified2 (0.25%)0000011000
29.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX2 (0.25%)0000101000
30.10signalling.phosphorelay2 (0.25%)0000200000
30.2.3signalling.receptor kinases.leucine rich repeat III2 (0.25%)1000010000
30.2.5signalling.receptor kinases.leucine rich repeat V2 (0.25%)2000000000
30.6signalling.MAP kinases2 (0.25%)0100001000
34.16transport.ABC transporters and multidrug resistance systems2 (0.25%)0000110000
34.22transport.cyclic nucleotide or calcium regulated channels2 (0.25%)1000001000
34.7transport.phosphate2 (0.25%)1000100000
34.9transport.metabolite transporters at the mitochondrial membrane2 (0.25%)0000001001
2major CHO metabolism1 (0.12%)0000000100
10.2cell wall.cellulose synthesis1 (0.12%)0000000001
10.2.1cell wall.cellulose synthesis.cellulose synthase1 (0.12%)0000000001
12N-metabolism1 (0.12%)0000010000
12.2N-metabolism.ammonia metabolism1 (0.12%)0000010000
12.2.1N-metabolism.ammonia metabolism.glutamate synthase1 (0.12%)0000010000
13.1amino acid metabolism.synthesis1 (0.12%)0000010000
13.1.1amino acid metabolism.synthesis.central amino acid metabolism1 (0.12%)0000010000
13.1.1.1amino acid metabolism.synthesis.central amino acid metabolism.GABA1 (0.12%)0000010000
13.1.1.1.1amino acid metabolism.synthesis.central amino acid metabolism.GABA.Glutamate decarboxylase1 (0.12%)0000010000
16.1.2secondary metabolism.isoprenoids.mevalonate pathway1 (0.12%)0000001000
16.1.2.3secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA reductase1 (0.12%)0000001000
16.1.5secondary metabolism.isoprenoids.terpenoids1 (0.12%)1000000000
16.10secondary metabolism.simple phenols1 (0.12%)0000001000
16.2.1.1secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL1 (0.12%)0000010000
16.2.1.2secondary metabolism.phenylpropanoids.lignin biosynthesis.C4H1 (0.12%)1000000000
16.2.1.3secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL1 (0.12%)0100000000
16.4secondary metabolism.N misc1 (0.12%)0000000001
16.4.1secondary metabolism.N misc.alkaloid-like1 (0.12%)0000000001
16.5secondary metabolism.sulfur-containing1 (0.12%)0000100000
16.5.99secondary metabolism.sulfur-containing.misc1 (0.12%)0000100000
16.5.99.1secondary metabolism.sulfur-containing.misc.alliinase1 (0.12%)0000100000
16.8secondary metabolism.flavonoids1 (0.12%)0000100000
16.8.1secondary metabolism.flavonoids.anthocyanins1 (0.12%)0000100000
16.8.1.12secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase1 (0.12%)0000100000
17.3.2hormone metabolism.brassinosteroid.signal transduction1 (0.12%)1000000000
17.3.2.1hormone metabolism.brassinosteroid.signal transduction.BRI1 (0.12%)1000000000
17.3.3hormone metabolism.brassinosteroid.induced-regulated-responsive-activated1 (0.12%)1000000000
17.4.2hormone metabolism.cytokinin.signal transduction1 (0.12%)0000001000
17.5.1.1hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase1 (0.12%)0000010000
17.5.1.2hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase1 (0.12%)1000000000
17.5.3hormone metabolism.ethylene.induced-regulated-responsive-activated1 (0.12%)1000000000
17.8.1hormone metabolism.salicylic acid.synthesis-degradation1 (0.12%)0000100000
2.2major CHO metabolism.degradation1 (0.12%)0000000100
17.8hormone metabolism.salicylic acid1 (0.12%)0000100000
2.2.2major CHO metabolism.degradation.starch1 (0.12%)0000000100
2.2.2.1major CHO metabolism.degradation.starch.starch cleavage1 (0.12%)0000000100
2.2.2.1.2major CHO metabolism.degradation.starch.starch cleavage.beta amylase1 (0.12%)0000000100
19tetrapyrrole synthesis1 (0.12%)0000001000
19.2tetrapyrrole synthesis.glu-tRNA reductase1 (0.12%)0000001000
21.1redox.thioredoxin1 (0.12%)0000010000
21.2redox.ascorbate and glutathione1 (0.12%)0000001000
21.2.2redox.ascorbate and glutathione.glutathione1 (0.12%)0000001000
21.4redox.glutaredoxins1 (0.12%)0000001000
21.6redox.dismutases and catalases1 (0.12%)0000010000
23.2nucleotide metabolism.degradation1 (0.12%)1000000000
23.3.1.1nucleotide metabolism.salvage.phosphoribosyltransferases.aprt1 (0.12%)0001000000
23.3.1.3nucleotide metabolism.salvage.phosphoribosyltransferases.upp1 (0.12%)0000001000
23.4nucleotide metabolism.phosphotransfer and pyrophosphatases1 (0.12%)0000001000
23.4.99nucleotide metabolism.phosphotransfer and pyrophosphatases.misc1 (0.12%)0000001000
26.14misc.oxygenases1 (0.12%)0000010000
26.3misc.gluco-, galacto- and mannosidases1 (0.12%)0000010000
26.3.1misc.gluco-, galacto- and mannosidases.alpha-galactosidase1 (0.12%)0000010000
26.7misc.oxidases - copper, flavone etc1 (0.12%)0000010000
27.1.1RNA.processing.splicing1 (0.12%)0000010000
27.1.2RNA.processing.RNA helicase1 (0.12%)0000000001
3.6minor CHO metabolism.callose1 (0.12%)0000010000
9.7mitochondrial electron transport / ATP synthesis.cytochrome c oxidase1 (0.12%)0100000000
27.2RNA.transcription1 (0.12%)0000100000
27.3.10RNA.regulation of transcription.C2C2(Zn) YABBY family1 (0.12%)0100000000
27.3.12RNA.regulation of transcription.C3H zinc finger family1 (0.12%)1000000000
27.3.15RNA.regulation of transcription.CCAAT box binding factor family, HAP31 (0.12%)1000000000
27.3.16RNA.regulation of transcription.CCAAT box binding factor family, HAP51 (0.12%)0000010000
27.3.26RNA.regulation of transcription.MYB-related transcription factor family1 (0.12%)0000010000
27.3.29RNA.regulation of transcription.TCP transcription factor family1 (0.12%)0000000001
27.3.40RNA.regulation of transcription.Aux/IAA family1 (0.12%)0000010000
27.3.42RNA.regulation of transcription.Bromodomain proteins1 (0.12%)0000010000
27.3.59RNA.regulation of transcription.Methyl binding domain proteins1 (0.12%)1000000000
27.3.64RNA.regulation of transcription.PHOR11 (0.12%)0001000000
29.2protein.synthesis1 (0.12%)0000000001
29.2.1.1.2.2.2protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L21 (0.12%)0000000100
29.2.1.2.2.10protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L101 (0.12%)0000010000
29.2.1.99.99protein.synthesis.ribosomal protein.unknown.unknown1 (0.12%)0000010000
29.2.3protein.synthesis.initiation1 (0.12%)0000000001
29.3.4protein.targeting.secretory pathway1 (0.12%)0100000000
29.3.4.99protein.targeting.secretory pathway.unspecified1 (0.12%)0100000000
29.5.11.5protein.degradation.ubiquitin.ubiquitin protease1 (0.12%)0000010000
29.5.4protein.degradation.aspartate protease1 (0.12%)0000010000
29.6protein.folding1 (0.12%)0000010000
30.2.25signalling.receptor kinases.wall associated kinase1 (0.12%)0000001000
30.4signalling.phosphinositides1 (0.12%)0000100000
31.2cell.division1 (0.12%)0100000000
31.4cell.vesicle transport1 (0.12%)0000010000
33.1development.storage proteins1 (0.12%)0000100000
34.13transport.peptides and oligopeptides1 (0.12%)0000001000
34.14transport.unspecified cations1 (0.12%)0000000001
34.18transport.unspecified anions1 (0.12%)0000000001
34.2transport.sugars1 (0.12%)0000000001
34.3transport.amino acids1 (0.12%)0000010000