PLAZA 3.0 Dicots : Binding Sites

InterPro domains associated with a binding site

Binding site: Motif_246
Name: LBOXLERBCS
Description: L box; Conserved sequence found in rbcS upstream sequences of both tomato and tobacco

#Associated genes: 21
#Associated InterPro terms: 50

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InterPro	Description	#Associated genes	ath	bra	cme	egr	gma	ptr	ppe	sly	stu	vvi
IPR004877	Cytochrome b561, eukaryote	3 (14.29%)	1	0	1	0	0	0	1	0	0	0
IPR006593	Cytochrome b561/ferric reductase transmembrane	3 (14.29%)	1	0	1	0	0	0	1	0	0	0
IPR005018	DOMON domain	3 (14.29%)	1	0	1	0	0	0	1	0	0	0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	2 (9.52%)	0	0	0	0	2	0	0	0	0	0
IPR005937	26S proteasome subunit P45	1 (4.76%)	0	0	0	0	0	0	0	0	0	1
IPR003593	AAA+ ATPase domain	1 (4.76%)	0	0	0	0	0	0	0	0	0	1
IPR001471	AP2/ERF domain	1 (4.76%)	0	0	0	0	0	1	0	0	0	0
IPR003960	ATPase, AAA-type, conserved site	1 (4.76%)	0	0	0	0	0	0	0	0	0	1
IPR003959	ATPase, AAA-type, core	1 (4.76%)	0	0	0	0	0	0	0	0	0	1
IPR010402	CCT domain	1 (4.76%)	0	0	0	1	0	0	0	0	0	0
IPR004713	Calcium/proton exchanger	1 (4.76%)	0	0	0	0	1	0	0	0	0	0
IPR004798	Calcium/proton exchanger CAX	1 (4.76%)	0	0	0	0	1	0	0	0	0	0
IPR004367	Cyclin, C-terminal domain	1 (4.76%)	0	0	0	0	0	1	0	0	0	0
IPR006671	Cyclin, N-terminal	1 (4.76%)	0	0	0	0	0	1	0	0	0	0
IPR013763	Cyclin-like	1 (4.76%)	0	0	0	0	0	1	0	0	0	0
IPR016177	DNA-binding domain	1 (4.76%)	0	0	0	0	0	1	0	0	0	0
IPR006121	Heavy metal-associated domain, HMA	1 (4.76%)	1	0	0	0	0	0	0	0	0	0
IPR005819	Histone H5	1 (4.76%)	0	0	0	0	0	0	0	0	1	0
IPR003347	JmjC domain	1 (4.76%)	0	0	0	0	0	0	0	0	0	1
IPR010920	Like-Sm (LSM) domain	1 (4.76%)	0	0	0	0	0	0	0	1	0	0
IPR005818	Linker histone H1/H5, domain H15	1 (4.76%)	0	0	0	0	0	0	0	0	1	0
IPR013216	Methyltransferase type 11	1 (4.76%)	0	0	1	0	0	0	0	0	0	0
IPR005678	Mitochondrial inner membrane translocase complex, subunit Tim17	1 (4.76%)	0	1	0	0	0	0	0	0	0	0
IPR003397	Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24	1 (4.76%)	0	1	0	0	0	0	0	0	0	0
IPR016040	NAD(P)-binding domain	1 (4.76%)	0	0	1	0	0	0	0	0	0	0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	1 (4.76%)	0	0	0	0	0	0	0	0	0	1
IPR001930	Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase	1 (4.76%)	0	0	0	0	0	1	0	0	0	0
IPR012779	Peptidase M1, alanyl aminopeptidase	1 (4.76%)	0	0	0	0	0	1	0	0	0	0
IPR024601	Peptidase M1, alanyl aminopeptidase, C-terminal	1 (4.76%)	0	0	0	0	0	1	0	0	0	0
IPR014782	Peptidase M1, membrane alanine aminopeptidase, N-terminal	1 (4.76%)	0	0	0	0	0	1	0	0	0	0
IPR006151	Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase	1 (4.76%)	0	0	1	0	0	0	0	0	0	0
IPR001163	Ribonucleoprotein LSM domain	1 (4.76%)	0	0	0	0	0	0	0	1	0	0
IPR006649	Ribonucleoprotein LSM domain, eukaryotic/archaea-type	1 (4.76%)	0	0	0	0	0	0	0	1	0	0
IPR004837	Sodium/calcium exchanger membrane region	1 (4.76%)	0	0	0	0	1	0	0	0	0	0
IPR000343	Tetrapyrrole biosynthesis, glutamyl-tRNA reductase	1 (4.76%)	0	0	1	0	0	0	0	0	0	0
IPR015895	Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal	1 (4.76%)	0	0	1	0	0	0	0	0	0	0
IPR018214	Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, conserved site	1 (4.76%)	0	0	1	0	0	0	0	0	0	0
IPR015896	Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain	1 (4.76%)	0	0	1	0	0	0	0	0	0	0
IPR001440	Tetratricopeptide TPR1	1 (4.76%)	0	0	0	0	0	1	0	0	0	0
IPR013105	Tetratricopeptide TPR2	1 (4.76%)	0	0	0	0	0	1	0	0	0	0
IPR019734	Tetratricopeptide repeat	1 (4.76%)	0	0	0	0	0	1	0	0	0	0
IPR013026	Tetratricopeptide repeat-containing domain	1 (4.76%)	0	0	0	0	0	1	0	0	0	0
IPR011990	Tetratricopeptide-like helical	1 (4.76%)	0	0	0	0	0	1	0	0	0	0
IPR013028	Transcription factor IIA, alpha subunit, N-terminal	1 (4.76%)	0	0	0	0	0	0	0	0	0	1
IPR004855	Transcription factor IIA, alpha/beta subunit	1 (4.76%)	0	0	0	0	0	0	0	0	0	1
IPR009088	Transcription factor IIA, beta-barrel	1 (4.76%)	0	0	0	0	0	0	0	0	0	1
IPR009083	Transcription factor IIA, helical	1 (4.76%)	0	0	0	0	0	0	0	0	0	1
IPR003349	Transcription factor jumonji, JmjN	1 (4.76%)	0	0	0	0	0	0	0	0	0	1
IPR011991	Winged helix-turn-helix DNA-binding domain	1 (4.76%)	0	0	0	0	0	0	0	0	1	0
IPR004198	Zinc finger, C5HC2-type	1 (4.76%)	0	0	0	0	0	0	0	0	0	1