Gene Ontology terms associated with a binding site

Binding site
Motif_219
Name
E2Fa
Description
The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants
#Associated genes
32
#Associated GO terms
514
 
Biological Process
Molecular Function
Cellular Component






Cellular Component (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005623cell24 (75.00%)4205126013
GO:0044464cell part24 (75.00%)4205126013
GO:0005622intracellular24 (75.00%)4205126013
GO:0044424intracellular part22 (68.75%)4104126013
GO:0043229intracellular organelle20 (62.50%)3104026013
GO:0043226organelle20 (62.50%)3104026013
GO:0043231intracellular membrane-bounded organelle18 (56.25%)3104015013
GO:0043227membrane-bounded organelle18 (56.25%)3104015013
GO:0005737cytoplasm11 (34.38%)1003015001
GO:0044444cytoplasmic part10 (31.25%)1003014001
GO:0044446intracellular organelle part10 (31.25%)0003022012
GO:0005634nucleus10 (31.25%)3101002012
GO:0044422organelle part10 (31.25%)0003022012
GO:0016020membrane7 (21.88%)0003011002
GO:0009507chloroplast6 (18.75%)0002012001
GO:0009536plastid6 (18.75%)0002012001
GO:0044434chloroplast part5 (15.63%)0002011001
GO:0032991macromolecular complex5 (15.63%)1000111001
GO:0044435plastid part5 (15.63%)0002011001
GO:0043234protein complex5 (15.63%)1000111001
GO:0009534chloroplast thylakoid4 (12.50%)0001011001
GO:0009535chloroplast thylakoid membrane4 (12.50%)0001011001
GO:0043232intracellular non-membrane-bounded organelle4 (12.50%)0000011011
GO:0043228non-membrane-bounded organelle4 (12.50%)0000011011
GO:0031984organelle subcompartment4 (12.50%)0001011001
GO:0034357photosynthetic membrane4 (12.50%)0001011001
GO:0031976plastid thylakoid4 (12.50%)0001011001
GO:0055035plastid thylakoid membrane4 (12.50%)0001011001
GO:0009579thylakoid4 (12.50%)0001011001
GO:0042651thylakoid membrane4 (12.50%)0001011001
GO:0044436thylakoid part4 (12.50%)0001011001
GO:0015629actin cytoskeleton2 (6.25%)0000011000
GO:1902494catalytic complex2 (6.25%)0000100001
GO:0005694chromosome2 (6.25%)0000000011
GO:0044430cytoskeletal part2 (6.25%)0000011000
GO:0005856cytoskeleton2 (6.25%)0000011000
GO:0070013intracellular organelle lumen2 (6.25%)0000000011
GO:0031224intrinsic to membrane2 (6.25%)0001000001
GO:0044425membrane part2 (6.25%)0001000001
GO:0031974membrane-enclosed lumen2 (6.25%)0000000011
GO:0005739mitochondrion2 (6.25%)0000002000
GO:0000228nuclear chromosome2 (6.25%)0000000011
GO:0031981nuclear lumen2 (6.25%)0000000011
GO:0044428nuclear part2 (6.25%)0000000011
GO:0005730nucleolus2 (6.25%)0000000011
GO:0043233organelle lumen2 (6.25%)0000000011
GO:0000151ubiquitin ligase complex2 (6.25%)0000100001
GO:0033186CAF-1 complex1 (3.13%)1000000000
GO:0005794Golgi apparatus1 (3.13%)0001000000
GO:0044431Golgi apparatus part1 (3.13%)0001000000
GO:0000139Golgi membrane1 (3.13%)0001000000
GO:0019005SCF ubiquitin ligase complex1 (3.13%)0000000001
GO:0005884actin filament1 (3.13%)0000001000
GO:0031225anchored to membrane1 (3.13%)0000000001
GO:0009941chloroplast envelope1 (3.13%)0001000000
GO:0031461cullin-RING ubiquitin ligase complex1 (3.13%)0000000001
GO:0005829cytosol1 (3.13%)1000000000
GO:0012505endomembrane system1 (3.13%)0001000000
GO:0005768endosome1 (3.13%)0001000000
GO:0031975envelope1 (3.13%)0001000000
GO:0043073germ cell nucleus1 (3.13%)0000000001
GO:0030173integral to Golgi membrane1 (3.13%)0001000000
GO:0016021integral to membrane1 (3.13%)0001000000
GO:0031301integral to organelle membrane1 (3.13%)0001000000
GO:0031228intrinsic to Golgi membrane1 (3.13%)0001000000
GO:0031300intrinsic to organelle membrane1 (3.13%)0001000000
GO:0001673male germ cell nucleus1 (3.13%)0000000001
GO:0016459myosin complex1 (3.13%)0000010000
GO:0031967organelle envelope1 (3.13%)0001000000
GO:0031090organelle membrane1 (3.13%)0001000000
GO:0009526plastid envelope1 (3.13%)0001000000
GO:0005802trans-Golgi network1 (3.13%)0001000000

Biological Process (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0009987cellular process18 (56.25%)4203103122
GO:0008152metabolic process15 (46.88%)4204101111
GO:0071704organic substance metabolic process15 (46.88%)4204101111
GO:0044238primary metabolic process15 (46.88%)4204101111
GO:0044237cellular metabolic process14 (43.75%)4203101111
GO:0044699single-organism process13 (40.63%)3102004012
GO:0043170macromolecule metabolic process12 (37.50%)3103101111
GO:0044763single-organism cellular process12 (37.50%)3102003012
GO:0044260cellular macromolecule metabolic process11 (34.38%)3102101111
GO:0016043cellular component organization10 (31.25%)2102002012
GO:0071840cellular component organization or biogenesis10 (31.25%)2102002012
GO:0048856anatomical structure development9 (28.13%)2102001012
GO:0006725cellular aromatic compound metabolic process9 (28.13%)4202001000
GO:0034641cellular nitrogen compound metabolic process9 (28.13%)4202001000
GO:0032502developmental process9 (28.13%)2102001012
GO:0046483heterocycle metabolic process9 (28.13%)4202001000
GO:0032501multicellular organismal process9 (28.13%)2101002012
GO:0006807nitrogen compound metabolic process9 (28.13%)4202001000
GO:0006139nucleobase-containing compound metabolic process9 (28.13%)4202001000
GO:0006996organelle organization9 (28.13%)2101002012
GO:1901360organic cyclic compound metabolic process9 (28.13%)4202001000
GO:0019538protein metabolic process9 (28.13%)1102101111
GO:0044707single-multicellular organism process9 (28.13%)2101002012
GO:0044767single-organism developmental process9 (28.13%)2102001012
GO:0065007biological regulation8 (25.00%)2102003000
GO:0007049cell cycle8 (25.00%)2101001012
GO:0044267cellular protein metabolic process8 (25.00%)1101101111
GO:0043412macromolecule modification8 (25.00%)2101101110
GO:0007275multicellular organismal development8 (25.00%)2101001012
GO:0050789regulation of biological process8 (25.00%)2102003000
GO:0050794regulation of cellular process8 (25.00%)2102003000
GO:0009058biosynthetic process7 (21.88%)3102001000
GO:0044249cellular biosynthetic process7 (21.88%)3102001000
GO:0034645cellular macromolecule biosynthetic process7 (21.88%)3102001000
GO:0006464cellular protein modification process7 (21.88%)1101101110
GO:0009059macromolecule biosynthetic process7 (21.88%)3102001000
GO:1901576organic substance biosynthetic process7 (21.88%)3102001000
GO:0036211protein modification process7 (21.88%)1101101110
GO:0044710single-organism metabolic process7 (21.88%)3102001000
GO:0006259DNA metabolic process6 (18.75%)3101001000
GO:0006260DNA replication6 (18.75%)3101001000
GO:0090304nucleic acid metabolic process6 (18.75%)3101001000
GO:0048731system development6 (18.75%)2101001001
GO:0016568chromatin modification5 (15.63%)2101001000
GO:0006325chromatin organization5 (15.63%)2101001000
GO:0051276chromosome organization5 (15.63%)2101001000
GO:0003006developmental process involved in reproduction5 (15.63%)1101001001
GO:0048229gametophyte development5 (15.63%)1000001012
GO:0043414macromolecule methylation5 (15.63%)2101001000
GO:0032259methylation5 (15.63%)2101001000
GO:0000278mitotic cell cycle5 (15.63%)2000000012
GO:0032504multicellular organism reproduction5 (15.63%)1101001001
GO:0048609multicellular organismal reproductive process5 (15.63%)1101001001
GO:0048513organ development5 (15.63%)2101001000
GO:0048827phyllome development5 (15.63%)2101001000
GO:0009555pollen development5 (15.63%)1000001012
GO:0009791post-embryonic development5 (15.63%)1101001001
GO:0051052regulation of DNA metabolic process5 (15.63%)2101001000
GO:0006275regulation of DNA replication5 (15.63%)2101001000
GO:0009889regulation of biosynthetic process5 (15.63%)2101001000
GO:0051726regulation of cell cycle5 (15.63%)2101001000
GO:0031326regulation of cellular biosynthetic process5 (15.63%)2101001000
GO:2000112regulation of cellular macromolecule biosynthetic process5 (15.63%)2101001000
GO:0031323regulation of cellular metabolic process5 (15.63%)2101001000
GO:0010556regulation of macromolecule biosynthetic process5 (15.63%)2101001000
GO:0060255regulation of macromolecule metabolic process5 (15.63%)2101001000
GO:0019222regulation of metabolic process5 (15.63%)2101001000
GO:0051171regulation of nitrogen compound metabolic process5 (15.63%)2101001000
GO:0019219regulation of nucleobase-containing compound metabolic process5 (15.63%)2101001000
GO:0080090regulation of primary metabolic process5 (15.63%)2101001000
GO:0000003reproduction5 (15.63%)1101001001
GO:0022414reproductive process5 (15.63%)1101001001
GO:0048608reproductive structure development5 (15.63%)1101001001
GO:0061458reproductive system development5 (15.63%)1101001001
GO:0050896response to stimulus5 (15.63%)2001002000
GO:0048367shoot system development5 (15.63%)2101001000
GO:0044702single organism reproductive process5 (15.63%)1101001001
GO:0048466androecium development4 (12.50%)1101001000
GO:0009901anther dehiscence4 (12.50%)1101001000
GO:0048653anther development4 (12.50%)1101001000
GO:0022402cell cycle process4 (12.50%)1000000012
GO:0051301cell division4 (12.50%)1000000012
GO:0051716cellular response to stimulus4 (12.50%)2001001000
GO:0016569covalent chromatin modification4 (12.50%)1101001000
GO:0009900dehiscence4 (12.50%)1101001000
GO:0048437floral organ development4 (12.50%)1101001000
GO:0048438floral whorl development4 (12.50%)1101001000
GO:0009908flower development4 (12.50%)1101001000
GO:0070734histone H3-K27 methylation4 (12.50%)1101001000
GO:0034968histone lysine methylation4 (12.50%)1101001000
GO:0016571histone methylation4 (12.50%)1101001000
GO:0016570histone modification4 (12.50%)1101001000
GO:0000280nuclear division4 (12.50%)1000000012
GO:0048285organelle fission4 (12.50%)1000000012
GO:0048569post-embryonic organ development4 (12.50%)1101001000
GO:0008213protein alkylation4 (12.50%)1101001000
GO:0006479protein methylation4 (12.50%)1101001000
GO:0048443stamen development4 (12.50%)1101001000
GO:0006261DNA-dependent DNA replication3 (9.38%)3000000000
GO:0019438aromatic compound biosynthetic process3 (9.38%)3000000000
GO:0022607cellular component assembly3 (9.38%)2000001000
GO:0044085cellular component biogenesis3 (9.38%)2000001000
GO:0044271cellular nitrogen compound biosynthetic process3 (9.38%)3000000000
GO:0018130heterocycle biosynthetic process3 (9.38%)3000000000
GO:0043933macromolecular complex subunit organization3 (9.38%)2000001000
GO:0007067mitosis3 (9.38%)0000000012
GO:0034654nucleobase-containing compound biosynthetic process3 (9.38%)3000000000
GO:1901362organic cyclic compound biosynthetic process3 (9.38%)3000000000
GO:0006796phosphate-containing compound metabolic process3 (9.38%)1000000110
GO:0006793phosphorus metabolic process3 (9.38%)1000000110
GO:0071822protein complex subunit organization3 (9.38%)2000001000
GO:0044711single-organism biosynthetic process3 (9.38%)2001000000
GO:0006281DNA repair2 (6.25%)2000000000
GO:0032774RNA biosynthetic process2 (6.25%)2000000000
GO:0016070RNA metabolic process2 (6.25%)2000000000
GO:0009653anatomical structure morphogenesis2 (6.25%)1001000000
GO:0007154cell communication2 (6.25%)0001001000
GO:0048869cellular developmental process2 (6.25%)1001000000
GO:0006974cellular response to DNA damage stimulus2 (6.25%)2000000000
GO:0070887cellular response to chemical stimulus2 (6.25%)0001001000
GO:0071310cellular response to organic substance2 (6.25%)0001001000
GO:0033554cellular response to stress2 (6.25%)2000000000
GO:0007010cytoskeleton organization2 (6.25%)1000001000
GO:0009553embryo sac development2 (6.25%)0000000011
GO:0010467gene expression2 (6.25%)2000000000
GO:0065003macromolecular complex assembly2 (6.25%)2000000000
GO:0009561megagametogenesis2 (6.25%)0000000011
GO:0016310phosphorylation2 (6.25%)0000000110
GO:0006461protein complex assembly2 (6.25%)2000000000
GO:0070271protein complex biogenesis2 (6.25%)2000000000
GO:0006468protein phosphorylation2 (6.25%)0000000110
GO:0006508proteolysis2 (6.25%)0001000001
GO:2001141regulation of RNA biosynthetic process2 (6.25%)2000000000
GO:0051252regulation of RNA metabolic process2 (6.25%)2000000000
GO:0010468regulation of gene expression2 (6.25%)2000000000
GO:0006355regulation of transcription, DNA-dependent2 (6.25%)2000000000
GO:0042221response to chemical2 (6.25%)0001001000
GO:0010033response to organic substance2 (6.25%)0001001000
GO:0006950response to stress2 (6.25%)2000000000
GO:0007165signal transduction2 (6.25%)0001001000
GO:0023052signaling2 (6.25%)0001001000
GO:0044700single organism signaling2 (6.25%)0001001000
GO:0006351transcription, DNA-templated2 (6.25%)2000000000
GO:00092652'-deoxyribonucleotide biosynthetic process1 (3.13%)1000000000
GO:00093942'-deoxyribonucleotide metabolic process1 (3.13%)1000000000
GO:0006305DNA alkylation1 (3.13%)1000000000
GO:0071103DNA conformation change1 (3.13%)1000000000
GO:0042023DNA endoreduplication1 (3.13%)1000000000
GO:0009294DNA mediated transformation1 (3.13%)0000001000
GO:0006306DNA methylation1 (3.13%)1000000000
GO:0044728DNA methylation or demethylation1 (3.13%)1000000000
GO:0006304DNA modification1 (3.13%)1000000000
GO:0006323DNA packaging1 (3.13%)1000000000
GO:0006310DNA recombination1 (3.13%)1000000000
GO:0006270DNA replication initiation1 (3.13%)1000000000
GO:0000086G2/M transition of mitotic cell cycle1 (3.13%)1000000000
GO:0031146SCF-dependent proteasomal ubiquitin-dependent protein catabolic process1 (3.13%)0000000001
GO:0030036actin cytoskeleton organization1 (3.13%)0000001000
GO:0051017actin filament bundle assembly1 (3.13%)0000001000
GO:0061572actin filament bundle organization1 (3.13%)0000001000
GO:0007015actin filament organization1 (3.13%)0000001000
GO:0030029actin filament-based process1 (3.13%)0000001000
GO:0048532anatomical structure arrangement1 (3.13%)1000000000
GO:0009734auxin mediated signaling pathway1 (3.13%)0000001000
GO:0016051carbohydrate biosynthetic process1 (3.13%)0001000000
GO:1901137carbohydrate derivative biosynthetic process1 (3.13%)1000000000
GO:1901135carbohydrate derivative metabolic process1 (3.13%)1000000000
GO:0005975carbohydrate metabolic process1 (3.13%)0001000000
GO:0009056catabolic process1 (3.13%)0000000001
GO:0044786cell cycle DNA replication1 (3.13%)1000000000
GO:0044770cell cycle phase transition1 (3.13%)1000000000
GO:0030154cell differentiation1 (3.13%)1000000000
GO:0016049cell growth1 (3.13%)0001000000
GO:0000902cell morphogenesis1 (3.13%)0001000000
GO:0008283cell proliferation1 (3.13%)1000000000
GO:0045454cell redox homeostasis1 (3.13%)0000001000
GO:0044036cell wall macromolecule metabolic process1 (3.13%)0001000000
GO:0071554cell wall organization or biogenesis1 (3.13%)0001000000
GO:0010383cell wall polysaccharide metabolic process1 (3.13%)0001000000
GO:0034637cellular carbohydrate biosynthetic process1 (3.13%)0001000000
GO:0044262cellular carbohydrate metabolic process1 (3.13%)0001000000
GO:0044248cellular catabolic process1 (3.13%)0000000001
GO:0032989cellular component morphogenesis1 (3.13%)0001000000
GO:0006073cellular glucan metabolic process1 (3.13%)0001000000
GO:0019725cellular homeostasis1 (3.13%)0000001000
GO:0051641cellular localization1 (3.13%)0000001000
GO:0034622cellular macromolecular complex assembly1 (3.13%)1000000000
GO:0044265cellular macromolecule catabolic process1 (3.13%)0000000001
GO:0033692cellular polysaccharide biosynthetic process1 (3.13%)0001000000
GO:0044264cellular polysaccharide metabolic process1 (3.13%)0001000000
GO:0048610cellular process involved in reproduction1 (3.13%)0000000001
GO:0022412cellular process involved in reproduction in multicellular organism1 (3.13%)0000000001
GO:0044257cellular protein catabolic process1 (3.13%)0000000001
GO:0071365cellular response to auxin stimulus1 (3.13%)0000001000
GO:0071495cellular response to endogenous stimulus1 (3.13%)0000001000
GO:0032870cellular response to hormone stimulus1 (3.13%)0000001000
GO:0071407cellular response to organic cyclic compound1 (3.13%)0001000000
GO:1901701cellular response to oxygen-containing compound1 (3.13%)0001000000
GO:0071446cellular response to salicylic acid stimulus1 (3.13%)0001000000
GO:0009658chloroplast organization1 (3.13%)0000001000
GO:0009902chloroplast relocation1 (3.13%)0000001000
GO:0031497chromatin assembly1 (3.13%)1000000000
GO:0006333chromatin assembly or disassembly1 (3.13%)1000000000
GO:0006338chromatin remodeling1 (3.13%)1000000000
GO:0000910cytokinesis1 (3.13%)1000000000
GO:0000911cytokinesis by cell plate formation1 (3.13%)1000000000
GO:0032506cytokinetic process1 (3.13%)1000000000
GO:0006226dUMP biosynthetic process1 (3.13%)1000000000
GO:0046078dUMP metabolic process1 (3.13%)1000000000
GO:0046080dUTP metabolic process1 (3.13%)1000000000
GO:0009157deoxyribonucleoside monophosphate biosynthetic process1 (3.13%)1000000000
GO:0009162deoxyribonucleoside monophosphate metabolic process1 (3.13%)1000000000
GO:0009200deoxyribonucleoside triphosphate metabolic process1 (3.13%)1000000000
GO:0009263deoxyribonucleotide biosynthetic process1 (3.13%)1000000000
GO:0009262deoxyribonucleotide metabolic process1 (3.13%)1000000000
GO:0046385deoxyribose phosphate biosynthetic process1 (3.13%)1000000000
GO:0019692deoxyribose phosphate metabolic process1 (3.13%)1000000000
GO:0048589developmental growth1 (3.13%)0001000000
GO:0060560developmental growth involved in morphogenesis1 (3.13%)0001000000
GO:0006302double-strand break repair1 (3.13%)1000000000
GO:0000724double-strand break repair via homologous recombination1 (3.13%)1000000000
GO:0009790embryo development1 (3.13%)0000000001
GO:0010256endomembrane system organization1 (3.13%)0001000000
GO:0009913epidermal cell differentiation1 (3.13%)1000000000
GO:0008544epidermis development1 (3.13%)1000000000
GO:0030855epithelial cell differentiation1 (3.13%)1000000000
GO:0060429epithelium development1 (3.13%)1000000000
GO:0051234establishment of localization1 (3.13%)0000001000
GO:0051649establishment of localization in cell1 (3.13%)0000001000
GO:0051656establishment of organelle localization1 (3.13%)0000001000
GO:0051667establishment of plastid localization1 (3.13%)0000001000
GO:0010154fruit development1 (3.13%)0000000001
GO:0042353fucose biosynthetic process1 (3.13%)0001000000
GO:0006004fucose metabolic process1 (3.13%)0001000000
GO:0007276gamete generation1 (3.13%)0000000001
GO:0016458gene silencing1 (3.13%)1000000000
GO:0031047gene silencing by RNA1 (3.13%)1000000000
GO:0055047generative cell mitosis1 (3.13%)0000000001
GO:0009292genetic transfer1 (3.13%)0000001000
GO:0009250glucan biosynthetic process1 (3.13%)0001000000
GO:0044042glucan metabolic process1 (3.13%)0001000000
GO:0040007growth1 (3.13%)0001000000
GO:0010410hemicellulose metabolic process1 (3.13%)0001000000
GO:0031507heterochromatin assembly1 (3.13%)1000000000
GO:0070828heterochromatin organization1 (3.13%)1000000000
GO:0019319hexose biosynthetic process1 (3.13%)0001000000
GO:0019318hexose metabolic process1 (3.13%)0001000000
GO:0042592homeostatic process1 (3.13%)0000001000
GO:0009755hormone-mediated signaling pathway1 (3.13%)0000001000
GO:0048366leaf development1 (3.13%)1000000000
GO:0051179localization1 (3.13%)0000001000
GO:0009057macromolecule catabolic process1 (3.13%)0000000001
GO:0048232male gamete generation1 (3.13%)0000000001
GO:0061024membrane organization1 (3.13%)0001000000
GO:0048507meristem development1 (3.13%)1000000000
GO:0009933meristem structural organization1 (3.13%)1000000000
GO:0000226microtubule cytoskeleton organization1 (3.13%)1000000000
GO:0007017microtubule-based process1 (3.13%)1000000000
GO:0044772mitotic cell cycle phase transition1 (3.13%)1000000000
GO:0000281mitotic cytokinesis1 (3.13%)1000000000
GO:1902410mitotic cytokinetic process1 (3.13%)1000000000
GO:0043632modification-dependent macromolecule catabolic process1 (3.13%)0000000001
GO:0019941modification-dependent protein catabolic process1 (3.13%)0000000001
GO:0046364monosaccharide biosynthetic process1 (3.13%)0001000000
GO:0005996monosaccharide metabolic process1 (3.13%)0001000000
GO:0044764multi-organism cellular process1 (3.13%)0000001000
GO:0051704multi-organism process1 (3.13%)0000001000
GO:0048519negative regulation of biological process1 (3.13%)1000000000
GO:0010629negative regulation of gene expression1 (3.13%)1000000000
GO:0010605negative regulation of macromolecule metabolic process1 (3.13%)1000000000
GO:0009892negative regulation of metabolic process1 (3.13%)1000000000
GO:0055086nucleobase-containing small molecule metabolic process1 (3.13%)1000000000
GO:0009124nucleoside monophosphate biosynthetic process1 (3.13%)1000000000
GO:0009123nucleoside monophosphate metabolic process1 (3.13%)1000000000
GO:1901293nucleoside phosphate biosynthetic process1 (3.13%)1000000000
GO:0006753nucleoside phosphate metabolic process1 (3.13%)1000000000
GO:0009141nucleoside triphosphate metabolic process1 (3.13%)1000000000
GO:0006334nucleosome assembly1 (3.13%)1000000000
GO:0034728nucleosome organization1 (3.13%)1000000000
GO:0009165nucleotide biosynthetic process1 (3.13%)1000000000
GO:0009117nucleotide metabolic process1 (3.13%)1000000000
GO:0070925organelle assembly1 (3.13%)1000000000
GO:0051640organelle localization1 (3.13%)0000001000
GO:1901575organic substance catabolic process1 (3.13%)0000000001
GO:1901566organonitrogen compound biosynthetic process1 (3.13%)1000000000
GO:1901564organonitrogen compound metabolic process1 (3.13%)1000000000
GO:0090407organophosphate biosynthetic process1 (3.13%)1000000000
GO:0019637organophosphate metabolic process1 (3.13%)1000000000
GO:0009638phototropism1 (3.13%)0000001000
GO:0051644plastid localization1 (3.13%)0000001000
GO:0009657plastid organization1 (3.13%)0000001000
GO:0000271polysaccharide biosynthetic process1 (3.13%)0001000000
GO:0005976polysaccharide metabolic process1 (3.13%)0001000000
GO:0048518positive regulation of biological process1 (3.13%)1000000000
GO:0045787positive regulation of cell cycle1 (3.13%)1000000000
GO:0048522positive regulation of cellular process1 (3.13%)1000000000
GO:0010498proteasomal protein catabolic process1 (3.13%)0000000001
GO:0043161proteasome-mediated ubiquitin-dependent protein catabolic process1 (3.13%)0000000001
GO:0030163protein catabolic process1 (3.13%)0000000001
GO:0032446protein modification by small protein conjugation1 (3.13%)0000100000
GO:0070647protein modification by small protein conjugation or removal1 (3.13%)0000100000
GO:0016567protein ubiquitination1 (3.13%)0000100000
GO:0065004protein-DNA complex assembly1 (3.13%)1000000000
GO:0071824protein-DNA complex subunit organization1 (3.13%)1000000000
GO:0051603proteolysis involved in cellular protein catabolic process1 (3.13%)0000000001
GO:0009177pyrimidine deoxyribonucleoside monophosphate biosynthetic process1 (3.13%)1000000000
GO:0009176pyrimidine deoxyribonucleoside monophosphate metabolic process1 (3.13%)1000000000
GO:0009211pyrimidine deoxyribonucleoside triphosphate metabolic process1 (3.13%)1000000000
GO:0009221pyrimidine deoxyribonucleotide biosynthetic process1 (3.13%)1000000000
GO:0009219pyrimidine deoxyribonucleotide metabolic process1 (3.13%)1000000000
GO:0009130pyrimidine nucleoside monophosphate biosynthetic process1 (3.13%)1000000000
GO:0009129pyrimidine nucleoside monophosphate metabolic process1 (3.13%)1000000000
GO:0009147pyrimidine nucleoside triphosphate metabolic process1 (3.13%)1000000000
GO:0006221pyrimidine nucleotide biosynthetic process1 (3.13%)1000000000
GO:0006220pyrimidine nucleotide metabolic process1 (3.13%)1000000000
GO:0072528pyrimidine-containing compound biosynthetic process1 (3.13%)1000000000
GO:0072527pyrimidine-containing compound metabolic process1 (3.13%)1000000000
GO:0000725recombinational repair1 (3.13%)1000000000
GO:0010389regulation of G2/M transition of mitotic cell cycle1 (3.13%)1000000000
GO:0022603regulation of anatomical structure morphogenesis1 (3.13%)1000000000
GO:0065008regulation of biological quality1 (3.13%)0000001000
GO:1901987regulation of cell cycle phase transition1 (3.13%)1000000000
GO:0010564regulation of cell cycle process1 (3.13%)1000000000
GO:0050793regulation of developmental process1 (3.13%)1000000000
GO:0040029regulation of gene expression, epigenetic1 (3.13%)1000000000
GO:0048509regulation of meristem development1 (3.13%)1000000000
GO:0009934regulation of meristem structural organization1 (3.13%)1000000000
GO:0007346regulation of mitotic cell cycle1 (3.13%)1000000000
GO:1901990regulation of mitotic cell cycle phase transition1 (3.13%)1000000000
GO:2000026regulation of multicellular organismal development1 (3.13%)1000000000
GO:0051239regulation of multicellular organismal process1 (3.13%)1000000000
GO:0009628response to abiotic stimulus1 (3.13%)0000001000
GO:0009733response to auxin1 (3.13%)0000001000
GO:0009637response to blue light1 (3.13%)0000001000
GO:0009719response to endogenous stimulus1 (3.13%)0000001000
GO:0009605response to external stimulus1 (3.13%)0000001000
GO:0009725response to hormone1 (3.13%)0000001000
GO:0009416response to light stimulus1 (3.13%)0000001000
GO:0014070response to organic cyclic compound1 (3.13%)0001000000
GO:1901700response to oxygen-containing compound1 (3.13%)0001000000
GO:0009314response to radiation1 (3.13%)0000001000
GO:0009751response to salicylic acid1 (3.13%)0001000000
GO:0009863salicylic acid mediated signaling pathway1 (3.13%)0001000000
GO:0048316seed development1 (3.13%)0000000001
GO:0019953sexual reproduction1 (3.13%)0000000001
GO:0044723single-organism carbohydrate metabolic process1 (3.13%)0001000000
GO:0044802single-organism membrane organization1 (3.13%)0001000000
GO:0043588skin development1 (3.13%)1000000000
GO:0044281small molecule metabolic process1 (3.13%)1000000000
GO:0016444somatic cell DNA recombination1 (3.13%)1000000000
GO:0051225spindle assembly1 (3.13%)1000000000
GO:0007051spindle organization1 (3.13%)1000000000
GO:0009888tissue development1 (3.13%)1000000000
GO:0010026trichome differentiation1 (3.13%)1000000000
GO:0009606tropism1 (3.13%)0000001000
GO:0006511ubiquitin-dependent protein catabolic process1 (3.13%)0000000001
GO:0009826unidimensional cell growth1 (3.13%)0001000000
GO:0009969xyloglucan biosynthetic process1 (3.13%)0001000000
GO:0010411xyloglucan metabolic process1 (3.13%)0001000000

Molecular Function (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005488binding23 (71.88%)4303124123
GO:0005515protein binding16 (50.00%)3201113122
GO:0003824catalytic activity15 (46.88%)3204112110
GO:1901363heterocyclic compound binding12 (37.50%)2202021111
GO:0043167ion binding12 (37.50%)2102022111
GO:0097159organic cyclic compound binding12 (37.50%)2202021111
GO:0005524ATP binding7 (21.88%)0001021111
GO:0030554adenyl nucleotide binding7 (21.88%)0001021111
GO:0032559adenyl ribonucleotide binding7 (21.88%)0001021111
GO:0043168anion binding7 (21.88%)0001021111
GO:0097367carbohydrate derivative binding7 (21.88%)0001021111
GO:0001882nucleoside binding7 (21.88%)0001021111
GO:1901265nucleoside phosphate binding7 (21.88%)0001021111
GO:0000166nucleotide binding7 (21.88%)0001021111
GO:0001883purine nucleoside binding7 (21.88%)0001021111
GO:0017076purine nucleotide binding7 (21.88%)0001021111
GO:0032550purine ribonucleoside binding7 (21.88%)0001021111
GO:0035639purine ribonucleoside triphosphate binding7 (21.88%)0001021111
GO:0032555purine ribonucleotide binding7 (21.88%)0001021111
GO:0032549ribonucleoside binding7 (21.88%)0001021111
GO:0032553ribonucleotide binding7 (21.88%)0001021111
GO:0036094small molecule binding7 (21.88%)0001021111
GO:0016740transferase activity7 (21.88%)1102001110
GO:0016787hydrolase activity6 (18.75%)2102010000
GO:0043169cation binding5 (15.63%)2101001000
GO:0046872metal ion binding5 (15.63%)2101001000
GO:0003676nucleic acid binding5 (15.63%)2201000000
GO:0008170N-methyltransferase activity4 (12.50%)1101001000
GO:0008757S-adenosylmethionine-dependent methyltransferase activity4 (12.50%)1101001000
GO:0042054histone methyltransferase activity4 (12.50%)1101001000
GO:0046976histone methyltransferase activity (H3-K27 specific)4 (12.50%)1101001000
GO:0018024histone-lysine N-methyltransferase activity4 (12.50%)1101001000
GO:0016278lysine N-methyltransferase activity4 (12.50%)1101001000
GO:0008168methyltransferase activity4 (12.50%)1101001000
GO:0008276protein methyltransferase activity4 (12.50%)1101001000
GO:0016279protein-lysine N-methyltransferase activity4 (12.50%)1101001000
GO:0016741transferase activity, transferring one-carbon groups4 (12.50%)1101001000
GO:0046914transition metal ion binding4 (12.50%)1101001000
GO:0008270zinc ion binding4 (12.50%)1101001000
GO:00084083'-5' exonuclease activity3 (9.38%)1101000000
GO:0004527exonuclease activity3 (9.38%)1101000000
GO:0016788hydrolase activity, acting on ester bonds3 (9.38%)1101000000
GO:0004518nuclease activity3 (9.38%)1101000000
GO:0003677DNA binding2 (6.25%)1100000000
GO:0016817hydrolase activity, acting on acid anhydrides2 (6.25%)1000010000
GO:0016818hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides2 (6.25%)1000010000
GO:0016301kinase activity2 (6.25%)0000000110
GO:0060089molecular transducer activity2 (6.25%)0000001100
GO:0016773phosphotransferase activity, alcohol group as acceptor2 (6.25%)0000000110
GO:0004672protein kinase activity2 (6.25%)0000000110
GO:0004674protein serine/threonine kinase activity2 (6.25%)0000000110
GO:0016462pyrophosphatase activity2 (6.25%)1000010000
GO:0004871signal transducer activity2 (6.25%)0000001100
GO:0016772transferase activity, transferring phosphorus-containing groups2 (6.25%)0000000110
GO:0016881acid-amino acid ligase activity1 (3.13%)0000100000
GO:0005516calmodulin binding1 (3.13%)0000001000
GO:0004170dUTP diphosphatase activity1 (3.13%)1000000000
GO:0015036disulfide oxidoreductase activity1 (3.13%)0000001000
GO:0009055electron carrier activity1 (3.13%)0000001000
GO:0004175endopeptidase activity1 (3.13%)0001000000
GO:0042393histone binding1 (3.13%)1000000000
GO:0042802identical protein binding1 (3.13%)1000000000
GO:0016874ligase activity1 (3.13%)0000100000
GO:0016879ligase activity, forming carbon-nitrogen bonds1 (3.13%)0000100000
GO:0000287magnesium ion binding1 (3.13%)1000000000
GO:0004222metalloendopeptidase activity1 (3.13%)0001000000
GO:0008237metallopeptidase activity1 (3.13%)0001000000
GO:0003774motor activity1 (3.13%)0000010000
GO:0017111nucleoside-triphosphatase activity1 (3.13%)0000010000
GO:0047429nucleoside-triphosphate diphosphatase activity1 (3.13%)1000000000
GO:0016491oxidoreductase activity1 (3.13%)0000001000
GO:0016667oxidoreductase activity, acting on a sulfur group of donors1 (3.13%)0000001000
GO:0008233peptidase activity1 (3.13%)0001000000
GO:0070011peptidase activity, acting on L-amino acid peptides1 (3.13%)0001000000
GO:0015035protein disulfide oxidoreductase activity1 (3.13%)0000001000
GO:0004872receptor activity1 (3.13%)0000000100
GO:0038023signaling receptor activity1 (3.13%)0000000100
GO:0019787small conjugating protein ligase activity1 (3.13%)0000100000
GO:0016757transferase activity, transferring glycosyl groups1 (3.13%)0001000000
GO:0019199transmembrane receptor protein kinase activity1 (3.13%)0000000100
GO:0004675transmembrane receptor protein serine/threonine kinase activity1 (3.13%)0000000100
GO:0004888transmembrane signaling receptor activity1 (3.13%)0000000100
GO:0004842ubiquitin-protein ligase activity1 (3.13%)0000100000