MapMan terms associated with a binding site

Binding site
Motif_212
Name
GARE2OSREP1
Description
Gibberellin-responsive element (GARE) found in the promoter region of a cystein proteinase (REP-1) gene in rice
#Associated genes
671
#Associated MapMan terms
210

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MapMan Description #Associated genes ath bra cme egr gma ptr ppe sly stu vvi
27RNA127 (18.93%)71601624231411016
27.3RNA.regulation of transcription104 (15.50%)7150920171111014
33development49 (7.30%)46013667304
33.99development.unspecified49 (7.30%)46013667304
26misc44 (6.56%)68041145204
29protein39 (5.81%)42056116401
17hormone metabolism26 (3.87%)35001113300
34transport26 (3.87%)1305153503
29.4protein.postranslational modification23 (3.43%)3203372201
30signalling23 (3.43%)5204461100
20stress20 (2.98%)4203403202
16secondary metabolism18 (2.68%)1102432401
31cell18 (2.68%)4401502002
10cell wall15 (2.24%)2201621001
27.4RNA.RNA binding15 (2.24%)0102442002
20.2stress.abiotic12 (1.79%)2102202201
27.3.22RNA.regulation of transcription.HB,Homeobox transcription factor family12 (1.79%)1002152001
29.5protein.degradation12 (1.79%)1001323200
26.12misc.peroxidases10 (1.49%)1401111001
27.3.17RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family10 (1.49%)0200311102
31.1cell.organisation10 (1.49%)3100302001
26.16misc.myrosinases-lectin-jacalin9 (1.34%)0002511000
26.22misc.short chain dehydrogenase/reductase (SDR)9 (1.34%)1300101201
27.3.6RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family9 (1.34%)0201211200
30.5signalling.G-proteins9 (1.34%)2201121000
1PS8 (1.19%)0101120201
16.1secondary metabolism.isoprenoids8 (1.19%)0100231100
27.1RNA.processing8 (1.19%)0005021000
27.3.60RNA.regulation of transcription.NIN-like bZIP-related family8 (1.19%)2300101100
28DNA8 (1.19%)1101101201
30.2signalling.receptor kinases8 (1.19%)1002230000
34.99transport.misc8 (1.19%)0001022201
1.1PS.lightreaction7 (1.04%)0001120201
10.7cell wall.modification7 (1.04%)0201111001
17.4hormone metabolism.cytokinin7 (1.04%)1100130100
17.5hormone metabolism.ethylene7 (1.04%)0200031100
20.1stress.biotic7 (1.04%)2101101001
27.3.25RNA.regulation of transcription.MYB domain transcription factor family7 (1.04%)0001021201
1.1.40PS.lightreaction.cyclic electron flow-chlororespiration6 (0.89%)0001020201
16.8secondary metabolism.flavonoids6 (0.89%)0001101201
16.8.3secondary metabolism.flavonoids.dihydroflavonols6 (0.89%)0001101201
17.4.1hormone metabolism.cytokinin.synthesis-degradation6 (0.89%)1100030100
28.1DNA.synthesis/chromatin structure6 (0.89%)1100001201
29.4.1protein.postranslational modification.kinase6 (0.89%)1002021000
16.1.3secondary metabolism.isoprenoids.tocopherol biosynthesis5 (0.75%)0100210100
16.1.3.1secondary metabolism.isoprenoids.tocopherol biosynthesis.hydroxyphenylpyruvate dioxygenase5 (0.75%)0100210100
17.3hormone metabolism.brassinosteroid5 (0.75%)0100031000
17.3.2hormone metabolism.brassinosteroid.signal transduction5 (0.75%)0100031000
17.3.2.2hormone metabolism.brassinosteroid.signal transduction.BZR5 (0.75%)0100031000
20.2.1stress.abiotic.heat5 (0.75%)0000102101
20.2.99stress.abiotic.unspecified5 (0.75%)1101100100
27.3.11RNA.regulation of transcription.C2H2 zinc finger family5 (0.75%)0201100001
27.3.67RNA.regulation of transcription.putative transcription regulator5 (0.75%)0200011001
27.3.9RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family5 (0.75%)1002100001
29.4.1.57protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII5 (0.75%)1002020000
29.5.4protein.degradation.aspartate protease5 (0.75%)0001201100
34.16transport.ABC transporters and multidrug resistance systems5 (0.75%)1000110101
3minor CHO metabolism4 (0.60%)1000201000
11lipid metabolism4 (0.60%)0100110001
16.8.3.1secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase4 (0.60%)0001101001
17.5.3hormone metabolism.ethylene.induced-regulated-responsive-activated4 (0.60%)0200020000
26.19misc.plastocyanin-like4 (0.60%)0100101001
26.2misc.UDP glucosyl and glucoronyl transferases4 (0.60%)2001010000
26.8misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases4 (0.60%)1000200001
27.1.19RNA.processing.ribonucleases4 (0.60%)0004000000
27.3.23RNA.regulation of transcription.HSF,Heat-shock transcription factor family4 (0.60%)0100110100
27.3.24RNA.regulation of transcription.MADS box transcription factor family4 (0.60%)0000030001
27.3.26RNA.regulation of transcription.MYB-related transcription factor family4 (0.60%)1000200001
27.3.29RNA.regulation of transcription.TCP transcription factor family4 (0.60%)0101100100
27.3.35RNA.regulation of transcription.bZIP transcription factor family4 (0.60%)0000102100
30.3signalling.calcium4 (0.60%)2001000100
31.4cell.vesicle transport4 (0.60%)0101100001
34.13transport.peptides and oligopeptides4 (0.60%)0101010100
9mitochondrial electron transport / ATP synthesis3 (0.45%)0000000201
10.6cell wall.degradation3 (0.45%)1000200000
10.6.3cell wall.degradation.pectate lyases and polygalacturonases3 (0.45%)1000200000
11.7lipid metabolism.unassigned3 (0.45%)0100110000
17.2hormone metabolism.auxin3 (0.45%)0000021000
17.5.2hormone metabolism.ethylene.signal transduction3 (0.45%)0000011100
27.3.20RNA.regulation of transcription.G2-like transcription factor family, GARP3 (0.45%)0000000102
27.3.5RNA.regulation of transcription.ARR3 (0.45%)0100200000
29.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX3 (0.45%)1000200000
30.2.11signalling.receptor kinases.leucine rich repeat XI3 (0.45%)0000120000
30.2.17signalling.receptor kinases.DUF 263 (0.45%)0002010000
31.2cell.division3 (0.45%)1100100000
34.3transport.amino acids3 (0.45%)0001011000
3.6minor CHO metabolism.callose2 (0.30%)1000100000
9.1mitochondrial electron transport / ATP synthesis.NADH-DH2 (0.30%)0000000101
10.8cell wall.pectin*esterases2 (0.30%)0000200000
15metal handling2 (0.30%)0000001100
15.2metal handling.binding, chelation and storage2 (0.30%)0000001100
16.2secondary metabolism.phenylpropanoids2 (0.30%)0001100000
17.1hormone metabolism.abscisic acid2 (0.30%)0100000100
17.2.3hormone metabolism.auxin.induced-regulated-responsive-activated2 (0.30%)0000011000
20.1.7stress.biotic.PR-proteins2 (0.30%)1100000000
27.3.57RNA.regulation of transcription.JUMONJI family2 (0.30%)1000100000
27.3.73RNA.regulation of transcription.Zn-finger(CCHC)2 (0.30%)0000020000
28.2DNA.repair2 (0.30%)0001100000
29.5.11.4.2protein.degradation.ubiquitin.E3.RING2 (0.30%)1001000000
29.7protein.glycosylation2 (0.30%)0001010000
30.2.99signalling.receptor kinases.misc2 (0.30%)0000110000
34.9transport.metabolite transporters at the mitochondrial membrane2 (0.30%)0101000000
9.1.2mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear2 (0.30%)0000000101
1.1.3PS.lightreaction.cytochrome b6/f1 (0.15%)0000100000
1.1.3.4PS.lightreaction.cytochrome b6/f.apocytochrome f (CYF)1 (0.15%)0000100000
1.3PS.calvin cycle1 (0.15%)0100000000
1.3.4PS.calvin cycle.GAP1 (0.15%)0100000000
2major CHO metabolism1 (0.15%)1000000000
10.1cell wall.precursor synthesis1 (0.15%)0000010000
10.1.6cell wall.precursor synthesis.GAE1 (0.15%)0000010000
10.2cell wall.cellulose synthesis1 (0.15%)0000100000
10.5cell wall.cell wall proteins1 (0.15%)1000000000
10.5.1cell wall.cell wall proteins.AGPs1 (0.15%)1000000000
10.5.1.1cell wall.cell wall proteins.AGPs.AGP1 (0.15%)1000000000
10.8.1cell wall.pectin*esterases.PME1 (0.15%)0000100000
10.8.2cell wall.pectin*esterases.acetyl esterase1 (0.15%)0000100000
11.1lipid metabolism.FA synthesis and FA elongation1 (0.15%)0000000001
11.1.7lipid metabolism.FA synthesis and FA elongation.ACP thioesterase1 (0.15%)0000000001
12.2N-metabolism.ammonia metabolism1 (0.15%)0000100000
12.2.2N-metabolism.ammonia metabolism.glutamine synthetase1 (0.15%)0000100000
13.2amino acid metabolism.degradation1 (0.15%)0000010000
13.2.6amino acid metabolism.degradation.aromatic aa1 (0.15%)0000010000
13.2.6.3amino acid metabolism.degradation.aromatic aa.tryptophan1 (0.15%)0000010000
16.1.1secondary metabolism.isoprenoids.non-mevalonate pathway1 (0.15%)0000010000
16.1.1.7secondary metabolism.isoprenoids.non-mevalonate pathway.HDR1 (0.15%)0000010000
16.1.2secondary metabolism.isoprenoids.mevalonate pathway1 (0.15%)0000001000
16.1.2.2secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA synthase1 (0.15%)0000001000
16.1.4secondary metabolism.isoprenoids.carotenoids1 (0.15%)0000010000
16.1.4.21secondary metabolism.isoprenoids.carotenoids.violaxanthin de-epoxidase1 (0.15%)0000010000
16.2.1secondary metabolism.phenylpropanoids.lignin biosynthesis1 (0.15%)0000100000
16.2.1.10secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD1 (0.15%)0000100000
16.4.1secondary metabolism.N misc.alkaloid-like1 (0.15%)1000000000
17.1.2hormone metabolism.abscisic acid.signal transduction1 (0.15%)0100000000
17.1.3hormone metabolism.abscisic acid.induced-regulated-responsive-activated1 (0.15%)0000000100
17.2.2hormone metabolism.auxin.signal transduction1 (0.15%)0000010000
17.4.2hormone metabolism.cytokinin.signal transduction1 (0.15%)0000100000
17.6.3hormone metabolism.gibberelin.induced-regulated-responsive-activated1 (0.15%)1000000000
17.7.1hormone metabolism.jasmonate.synthesis-degradation1 (0.15%)1000000000
17.7.1.1hormone metabolism.jasmonate.synthesis-degradation.lipases1 (0.15%)1000000000
2.2major CHO metabolism.degradation1 (0.15%)1000000000
16.10secondary metabolism.simple phenols1 (0.15%)0000000100
16.4secondary metabolism.N misc1 (0.15%)1000000000
17.6hormone metabolism.gibberelin1 (0.15%)1000000000
17.7hormone metabolism.jasmonate1 (0.15%)1000000000
2.2.1major CHO metabolism.degradation.sucrose1 (0.15%)1000000000
2.2.1.3major CHO metabolism.degradation.sucrose.invertases1 (0.15%)1000000000
2.2.1.3.2major CHO metabolism.degradation.sucrose.invertases.cell wall1 (0.15%)1000000000
7OPP1 (0.15%)0000000001
12N-metabolism1 (0.15%)0000100000
13amino acid metabolism1 (0.15%)0000010000
20.1.3stress.biotic.signalling1 (0.15%)0000000001
20.1.3.1stress.biotic.signalling.MLO-like1 (0.15%)0000000001
20.2.2stress.abiotic.cold1 (0.15%)1000000000
21redox1 (0.15%)0000000100
21.1redox.thioredoxin1 (0.15%)0000000100
22polyamine metabolism1 (0.15%)0000001000
22.1polyamine metabolism.synthesis1 (0.15%)0000001000
22.1.2polyamine metabolism.synthesis.SAM decarboxylase1 (0.15%)0000001000
23nucleotide metabolism1 (0.15%)0000000100
23.4nucleotide metabolism.phosphotransfer and pyrophosphatases1 (0.15%)0000000100
23.4.3nucleotide metabolism.phosphotransfer and pyrophosphatases.uridylate kinase1 (0.15%)0000000100
26.11misc.alcohol dehydrogenases1 (0.15%)0000100000
26.11.1misc.alcohol dehydrogenases.cinnamyl alcohol dehydrogenase1 (0.15%)0000100000
26.24misc.GCN5-related N-acetyltransferase1 (0.15%)0000001000
26.7misc.oxidases - copper, flavone etc1 (0.15%)0000010000
26.9misc.glutathione S transferases1 (0.15%)1000000000
27.3.10RNA.regulation of transcription.C2C2(Zn) YABBY family1 (0.15%)0000000001
27.3.12RNA.regulation of transcription.C3H zinc finger family1 (0.15%)0001000000
27.3.21RNA.regulation of transcription.GRAS transcription factor family1 (0.15%)0000000001
27.3.3RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family1 (0.15%)0000100000
27.3.30RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family1 (0.15%)0000000001
27.3.40RNA.regulation of transcription.Aux/IAA family1 (0.15%)0000010000
27.3.44RNA.regulation of transcription.Chromatin Remodeling Factors1 (0.15%)0000100000
27.3.63RNA.regulation of transcription.PHD finger transcription factor1 (0.15%)0000001000
27.3.66RNA.regulation of transcription.Psudo ARR transcription factor family1 (0.15%)0000000100
27.3.7RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family1 (0.15%)0000001000
27.3.8RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family1 (0.15%)0000100000
27.3.99RNA.regulation of transcription.unclassified1 (0.15%)1000000000
28.1.3DNA.synthesis/chromatin structure.histone1 (0.15%)1000000000
28.1.3.2DNA.synthesis/chromatin structure.histone.core1 (0.15%)1000000000
28.1.3.2.1DNA.synthesis/chromatin structure.histone.core.H2A1 (0.15%)1000000000
29.1protein.aa activation1 (0.15%)0000010000
29.2.1.1.1.2.2protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L21 (0.15%)0000010000
29.2.1.1.2.2.2protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L21 (0.15%)0000000100
29.3protein.targeting1 (0.15%)0000001000
29.3.4protein.targeting.secretory pathway1 (0.15%)0000001000
29.3.4.3protein.targeting.secretory pathway.vacuole1 (0.15%)0000001000
29.4.1.61protein.postranslational modification.kinase.receptor like cytoplasmatic kinase X1 (0.15%)0000001000
29.5.1protein.degradation.subtilases1 (0.15%)0000000100
29.5.3protein.degradation.cysteine protease1 (0.15%)0000001000
29.5.5protein.degradation.serine protease1 (0.15%)0000100000
29.5.7protein.degradation.metalloprotease1 (0.15%)0000001000
3.2minor CHO metabolism.trehalose1 (0.15%)0000001000
3.2.1minor CHO metabolism.trehalose.TPS1 (0.15%)0000001000
3.4minor CHO metabolism.myo-inositol1 (0.15%)0000100000
3.4.4minor CHO metabolism.myo-inositol.myo inositol oxygenases1 (0.15%)0000100000
7.3OPP.electron transfer1 (0.15%)0000000001
9.7mitochondrial electron transport / ATP synthesis.cytochrome c oxidase1 (0.15%)0000000100
30.10signalling.phosphorelay1 (0.15%)0000100000
30.11signalling.light1 (0.15%)0000100000
30.2.4signalling.receptor kinases.leucine rich repeat IV1 (0.15%)1000000000
30.4signalling.phosphinositides1 (0.15%)0000010000
30.4.1signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase1 (0.15%)0000010000
31.3cell.cycle1 (0.15%)0100000000
34.11transport.NDP-sugars at the ER1 (0.15%)0000000001
34.15transport.potassium1 (0.15%)0000000100
34.18transport.unspecified anions1 (0.15%)0001000000
34.19transport.Major Intrinsic Proteins1 (0.15%)0100000000
34.19.3transport.Major Intrinsic Proteins.NIP1 (0.15%)0100000000
34.2transport.sugars1 (0.15%)0000000100