Gene Ontology terms associated with a binding site

Binding site
Motif_191
Name
AtERF-4;AtERF-3
Description
Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression
#Associated genes
73
#Associated GO terms
637
 
Biological Process
Molecular Function
Cellular Component






Molecular Function (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005488binding39 (53.42%)0022594854
GO:0003824catalytic activity31 (42.47%)1014794302
GO:1901363heterocyclic compound binding27 (36.99%)0001483542
GO:0097159organic cyclic compound binding27 (36.99%)0001483542
GO:0005515protein binding26 (35.62%)0012264443
GO:0043167ion binding23 (31.51%)0012462521
GO:0003676nucleic acid binding18 (24.66%)0000152442
GO:0043169cation binding15 (20.55%)0011231421
GO:0016787hydrolase activity15 (20.55%)1003242102
GO:0046872metal ion binding15 (20.55%)0011231421
GO:0003723RNA binding11 (15.07%)0000022331
GO:0046914transition metal ion binding10 (13.70%)0001221211
GO:0008270zinc ion binding9 (12.33%)0001121211
GO:0005524ATP binding8 (10.96%)0001231100
GO:0030554adenyl nucleotide binding8 (10.96%)0001231100
GO:0032559adenyl ribonucleotide binding8 (10.96%)0001231100
GO:0043168anion binding8 (10.96%)0001231100
GO:0097367carbohydrate derivative binding8 (10.96%)0001231100
GO:0001882nucleoside binding8 (10.96%)0001231100
GO:1901265nucleoside phosphate binding8 (10.96%)0001231100
GO:0000166nucleotide binding8 (10.96%)0001231100
GO:0001883purine nucleoside binding8 (10.96%)0001231100
GO:0017076purine nucleotide binding8 (10.96%)0001231100
GO:0032550purine ribonucleoside binding8 (10.96%)0001231100
GO:0035639purine ribonucleoside triphosphate binding8 (10.96%)0001231100
GO:0032555purine ribonucleotide binding8 (10.96%)0001231100
GO:0032549ribonucleoside binding8 (10.96%)0001231100
GO:0032553ribonucleotide binding8 (10.96%)0001231100
GO:0036094small molecule binding8 (10.96%)0001231100
GO:0003677DNA binding7 (9.59%)0000121111
GO:0016817hydrolase activity, acting on acid anhydrides7 (9.59%)0001131100
GO:0016818hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides7 (9.59%)0001131100
GO:0016740transferase activity6 (8.22%)0001131000
GO:0016788hydrolase activity, acting on ester bonds5 (6.85%)0001111001
GO:0000339RNA cap binding4 (5.48%)0000001111
GO:0016491oxidoreductase activity4 (5.48%)0001101100
GO:0016790thiolester hydrolase activity4 (5.48%)0001101001
GO:0004221ubiquitin thiolesterase activity4 (5.48%)0001101001
GO:0016830carbon-carbon lyase activity3 (4.11%)0000100200
GO:0008234cysteine-type peptidase activity3 (4.11%)0001001001
GO:0016829lyase activity3 (4.11%)0000100200
GO:0008233peptidase activity3 (4.11%)0001001001
GO:0070011peptidase activity, acting on L-amino acid peptides3 (4.11%)0001001001
GO:0019783small conjugating protein-specific protease activity3 (4.11%)0001001001
GO:0016757transferase activity, transferring glycosyl groups3 (4.11%)0001011000
GO:0005215transporter activity3 (4.11%)0000020100
GO:0004843ubiquitin-specific protease activity3 (4.11%)0001001001
GO:0016887ATPase activity2 (2.74%)0000010100
GO:0042623ATPase activity, coupled2 (2.74%)0000010100
GO:0043492ATPase activity, coupled to movement of substances2 (2.74%)0000010100
GO:0042626ATPase activity, coupled to transmembrane movement of substances2 (2.74%)0000010100
GO:0015405P-P-bond-hydrolysis-driven transmembrane transporter activity2 (2.74%)0000010100
GO:0022804active transmembrane transporter activity2 (2.74%)0000010100
GO:0016831carboxy-lyase activity2 (2.74%)0000000200
GO:0003690double-stranded DNA binding2 (2.74%)0000011000
GO:0016820hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances2 (2.74%)0000010100
GO:0016798hydrolase activity, acting on glycosyl bonds2 (2.74%)1001000000
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds2 (2.74%)1001000000
GO:0016853isomerase activity2 (2.74%)0010010000
GO:0000287magnesium ion binding2 (2.74%)0000000200
GO:0060089molecular transducer activity2 (2.74%)0010000001
GO:0017111nucleoside-triphosphatase activity2 (2.74%)0000010100
GO:0015399primary active transmembrane transporter activity2 (2.74%)0000010100
GO:0016462pyrophosphatase activity2 (2.74%)0000010100
GO:0016984ribulose-bisphosphate carboxylase activity2 (2.74%)0000000200
GO:0004871signal transducer activity2 (2.74%)0010000001
GO:0043566structure-specific DNA binding2 (2.74%)0000011000
GO:0022892substrate-specific transporter activity2 (2.74%)0000010100
GO:0016758transferase activity, transferring hexosyl groups2 (2.74%)0001001000
GO:0016772transferase activity, transferring phosphorus-containing groups2 (2.74%)0000110000
GO:0008135translation factor activity, nucleic acid binding2 (2.74%)0000000110
GO:0003743translation initiation factor activity2 (2.74%)0000000110
GO:0022857transmembrane transporter activity2 (2.74%)0000010100
GO:0042625ATPase activity, coupled to transmembrane movement of ions1 (1.37%)0000000100
GO:0044769ATPase activity, coupled to transmembrane movement of ions, rotational mechanism1 (1.37%)0000000100
GO:0051020GTPase binding1 (1.37%)0000010000
GO:0008080N-acetyltransferase activity1 (1.37%)0000010000
GO:0016410N-acyltransferase activity1 (1.37%)0000010000
GO:0008536Ran GTPase binding1 (1.37%)0000010000
GO:0017016Ras GTPase binding1 (1.37%)0000010000
GO:0016407acetyltransferase activity1 (1.37%)0000010000
GO:0016832aldehyde-lyase activity1 (1.37%)0000100000
GO:0008422beta-glucosidase activity1 (1.37%)1000000000
GO:0052689carboxylic ester hydrolase activity1 (1.37%)0000010000
GO:0008324cation transmembrane transporter activity1 (1.37%)0000000100
GO:0019829cation-transporting ATPase activity1 (1.37%)0000000100
GO:0016859cis-trans isomerase activity1 (1.37%)0000010000
GO:0047800cysteamine dioxygenase activity1 (1.37%)0000001000
GO:0051213dioxygenase activity1 (1.37%)0000001000
GO:0010385double-stranded methylated DNA binding1 (1.37%)0000010000
GO:0009055electron carrier activity1 (1.37%)0000100000
GO:0019899enzyme binding1 (1.37%)0000010000
GO:0004332fructose-bisphosphate aldolase activity1 (1.37%)0000100000
GO:0015926glucosidase activity1 (1.37%)1000000000
GO:0020037heme binding1 (1.37%)0000100000
GO:0004402histone acetyltransferase activity1 (1.37%)0000010000
GO:0042393histone binding1 (1.37%)0000010000
GO:0015078hydrogen ion transmembrane transporter activity1 (1.37%)0000000100
GO:0008262importin-alpha export receptor activity1 (1.37%)0000010000
GO:0022890inorganic cation transmembrane transporter activity1 (1.37%)0000000100
GO:0015075ion transmembrane transporter activity1 (1.37%)0000000100
GO:0005506iron ion binding1 (1.37%)0000100000
GO:0016301kinase activity1 (1.37%)0000100000
GO:0016298lipase activity1 (1.37%)0000010000
GO:0004497monooxygenase activity1 (1.37%)0000000100
GO:0015077monovalent inorganic cation transmembrane transporter activity1 (1.37%)0000000100
GO:0005049nuclear export signal receptor activity1 (1.37%)0000010000
GO:0019205nucleobase-containing compound kinase activity1 (1.37%)0000100000
GO:0019206nucleoside kinase activity1 (1.37%)0000100000
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1 (1.37%)0000100000
GO:0016701oxidoreductase activity, acting on single donors with incorporation of molecular oxygen1 (1.37%)0000001000
GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen1 (1.37%)0000001000
GO:0003755peptidyl-prolyl cis-trans isomerase activity1 (1.37%)0000010000
GO:0016773phosphotransferase activity, alcohol group as acceptor1 (1.37%)0000100000
GO:0008565protein transporter activity1 (1.37%)0000010000
GO:0046933proton-transporting ATP synthase activity, rotational mechanism1 (1.37%)0000000100
GO:0003697single-stranded DNA binding1 (1.37%)0000001000
GO:0031267small GTPase binding1 (1.37%)0000010000
GO:0022891substrate-specific transmembrane transporter activity1 (1.37%)0000000100
GO:0046906tetrapyrrole binding1 (1.37%)0000100000
GO:0016746transferase activity, transferring acyl groups1 (1.37%)0000010000
GO:0016747transferase activity, transferring acyl groups other than amino-acyl groups1 (1.37%)0000010000
GO:0004806triglyceride lipase activity1 (1.37%)0000010000
GO:0004849uridine kinase activity1 (1.37%)0000100000
GO:0016762xyloglucan:xyloglucosyl transferase activity1 (1.37%)0001000000

Biological Process (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0008152metabolic process45 (61.64%)10048116933
GO:0009987cellular process40 (54.79%)00036115843
GO:0071704organic substance metabolic process38 (52.05%)10044104933
GO:0044238primary metabolic process37 (50.68%)10044104833
GO:0044237cellular metabolic process35 (47.95%)0003495833
GO:0044260cellular macromolecule metabolic process30 (41.10%)0003394533
GO:0043170macromolecule metabolic process30 (41.10%)0003394533
GO:0044699single-organism process29 (39.73%)1003585511
GO:0006725cellular aromatic compound metabolic process26 (35.62%)0001373732
GO:0034641cellular nitrogen compound metabolic process26 (35.62%)0001373732
GO:0046483heterocycle metabolic process26 (35.62%)0001373732
GO:0006807nitrogen compound metabolic process26 (35.62%)0001373732
GO:0006139nucleobase-containing compound metabolic process26 (35.62%)0001373732
GO:1901360organic cyclic compound metabolic process26 (35.62%)0001373732
GO:0090304nucleic acid metabolic process23 (31.51%)0001273532
GO:0016070RNA metabolic process22 (30.14%)0001263532
GO:0009058biosynthetic process19 (26.03%)0002252521
GO:1901576organic substance biosynthetic process19 (26.03%)0002252521
GO:0044249cellular biosynthetic process18 (24.66%)0001252521
GO:0019438aromatic compound biosynthetic process16 (21.92%)0001242421
GO:0044271cellular nitrogen compound biosynthetic process16 (21.92%)0001242421
GO:0018130heterocycle biosynthetic process16 (21.92%)0001242421
GO:0034654nucleobase-containing compound biosynthetic process16 (21.92%)0001242421
GO:1901362organic cyclic compound biosynthetic process16 (21.92%)0001242421
GO:0065007biological regulation15 (20.55%)0001272111
GO:0034645cellular macromolecule biosynthetic process15 (20.55%)0001252221
GO:0010467gene expression15 (20.55%)0001252221
GO:0009059macromolecule biosynthetic process15 (20.55%)0001252221
GO:0050789regulation of biological process15 (20.55%)0001272111
GO:0044763single-organism cellular process15 (20.55%)0001353201
GO:0032774RNA biosynthetic process14 (19.18%)0001242221
GO:0031323regulation of cellular metabolic process14 (19.18%)0001262111
GO:0050794regulation of cellular process14 (19.18%)0001262111
GO:0060255regulation of macromolecule metabolic process14 (19.18%)0001262111
GO:0019222regulation of metabolic process14 (19.18%)0001262111
GO:0080090regulation of primary metabolic process14 (19.18%)0001262111
GO:0006351transcription, DNA-templated14 (19.18%)0001242221
GO:0010468regulation of gene expression13 (17.81%)0001252111
GO:0051171regulation of nitrogen compound metabolic process13 (17.81%)0001252111
GO:0019219regulation of nucleobase-containing compound metabolic process13 (17.81%)0001252111
GO:0044710single-organism metabolic process13 (17.81%)1001232400
GO:0032502developmental process12 (16.44%)0002124111
GO:0007275multicellular organismal development12 (16.44%)0002124111
GO:0032501multicellular organismal process12 (16.44%)0002124111
GO:2001141regulation of RNA biosynthetic process12 (16.44%)0001242111
GO:0051252regulation of RNA metabolic process12 (16.44%)0001242111
GO:0009889regulation of biosynthetic process12 (16.44%)0001242111
GO:0031326regulation of cellular biosynthetic process12 (16.44%)0001242111
GO:2000112regulation of cellular macromolecule biosynthetic process12 (16.44%)0001242111
GO:0010556regulation of macromolecule biosynthetic process12 (16.44%)0001242111
GO:0006355regulation of transcription, DNA-dependent12 (16.44%)0001242111
GO:0050896response to stimulus12 (16.44%)1010231211
GO:0044707single-multicellular organism process12 (16.44%)0002124111
GO:0044767single-organism developmental process12 (16.44%)0002124111
GO:0048856anatomical structure development9 (12.33%)0002114001
GO:0048731system development9 (12.33%)0002114001
GO:0051234establishment of localization8 (10.96%)0000230210
GO:0051179localization8 (10.96%)0000230210
GO:0006810transport8 (10.96%)0000230210
GO:0044267cellular protein metabolic process7 (9.59%)0001122001
GO:0009791post-embryonic development7 (9.59%)0001012111
GO:0019538protein metabolic process7 (9.59%)0001122001
GO:0009056catabolic process6 (8.22%)0001211001
GO:0006464cellular protein modification process6 (8.22%)0001022001
GO:0043412macromolecule modification6 (8.22%)0001022001
GO:1901575organic substance catabolic process6 (8.22%)0001211001
GO:0036211protein modification process6 (8.22%)0001022001
GO:0009628response to abiotic stimulus6 (8.22%)1010111001
GO:0048367shoot system development6 (8.22%)0001113000
GO:0005975carbohydrate metabolic process5 (6.85%)1001110100
GO:0044711single-organism biosynthetic process5 (6.85%)0001010300
GO:0044248cellular catabolic process4 (5.48%)0001101001
GO:0044265cellular macromolecule catabolic process4 (5.48%)0001101001
GO:0044257cellular protein catabolic process4 (5.48%)0001101001
GO:0003006developmental process involved in reproduction4 (5.48%)0001002001
GO:0048366leaf development4 (5.48%)0001111000
GO:0009057macromolecule catabolic process4 (5.48%)0001101001
GO:0043632modification-dependent macromolecule catabolic process4 (5.48%)0001101001
GO:0019941modification-dependent protein catabolic process4 (5.48%)0001101001
GO:0048519negative regulation of biological process4 (5.48%)0000011110
GO:0048513organ development4 (5.48%)0001002001
GO:0055114oxidation-reduction process4 (5.48%)0001201000
GO:0006796phosphate-containing compound metabolic process4 (5.48%)0000110200
GO:0006793phosphorus metabolic process4 (5.48%)0000110200
GO:0048827phyllome development4 (5.48%)0001111000
GO:0030163protein catabolic process4 (5.48%)0001101001
GO:0006508proteolysis4 (5.48%)0001101001
GO:0051603proteolysis involved in cellular protein catabolic process4 (5.48%)0001101001
GO:0000003reproduction4 (5.48%)0001002001
GO:0022414reproductive process4 (5.48%)0001002001
GO:0048608reproductive structure development4 (5.48%)0001002001
GO:0061458reproductive system development4 (5.48%)0001002001
GO:0042221response to chemical4 (5.48%)0000120100
GO:0009719response to endogenous stimulus4 (5.48%)0000120100
GO:0010033response to organic substance4 (5.48%)0000120100
GO:1901700response to oxygen-containing compound4 (5.48%)0000120100
GO:0044702single organism reproductive process4 (5.48%)0001002001
GO:0009888tissue development4 (5.48%)0001002001
GO:0006511ubiquitin-dependent protein catabolic process4 (5.48%)0001101001
GO:0009653anatomical structure morphogenesis3 (4.11%)0001001001
GO:1901137carbohydrate derivative biosynthetic process3 (4.11%)0000010200
GO:1901135carbohydrate derivative metabolic process3 (4.11%)0000010200
GO:0048468cell development3 (4.11%)0001001001
GO:0030154cell differentiation3 (4.11%)0001001001
GO:0016049cell growth3 (4.11%)0001001001
GO:0048469cell maturation3 (4.11%)0001001001
GO:0048869cellular developmental process3 (4.11%)0001001001
GO:0048588developmental cell growth3 (4.11%)0001001001
GO:0048589developmental growth3 (4.11%)0001001001
GO:0060560developmental growth involved in morphogenesis3 (4.11%)0001001001
GO:0021700developmental maturation3 (4.11%)0001001001
GO:0009790embryo development3 (4.11%)0001001001
GO:0009793embryo development ending in seed dormancy3 (4.11%)0001001001
GO:0009913epidermal cell differentiation3 (4.11%)0001001001
GO:0008544epidermis development3 (4.11%)0001001001
GO:0030855epithelial cell differentiation3 (4.11%)0001001001
GO:0060429epithelium development3 (4.11%)0001001001
GO:0010154fruit development3 (4.11%)0001001001
GO:0040007growth3 (4.11%)0001001001
GO:0006629lipid metabolic process3 (4.11%)0001020000
GO:0051093negative regulation of developmental process3 (4.11%)0000001110
GO:0051241negative regulation of multicellular organismal process3 (4.11%)0000001110
GO:0048581negative regulation of post-embryonic development3 (4.11%)0000001110
GO:0055086nucleobase-containing small molecule metabolic process3 (4.11%)0000100200
GO:0006753nucleoside phosphate metabolic process3 (4.11%)0000100200
GO:0009117nucleotide metabolic process3 (4.11%)0000100200
GO:1901564organonitrogen compound metabolic process3 (4.11%)0000100200
GO:0019637organophosphate metabolic process3 (4.11%)0000100200
GO:0016579protein deubiquitination3 (4.11%)0001001001
GO:0070647protein modification by small protein conjugation or removal3 (4.11%)0001001001
GO:0070646protein modification by small protein removal3 (4.11%)0001001001
GO:0050793regulation of developmental process3 (4.11%)0000001110
GO:2000026regulation of multicellular organismal development3 (4.11%)0000001110
GO:0051239regulation of multicellular organismal process3 (4.11%)0000001110
GO:0048580regulation of post-embryonic development3 (4.11%)0000001110
GO:0097305response to alcohol3 (4.11%)0000020100
GO:0009607response to biotic stimulus3 (4.11%)0000010110
GO:0009725response to hormone3 (4.11%)0000020100
GO:0009416response to light stimulus3 (4.11%)0010010001
GO:0033993response to lipid3 (4.11%)0000020100
GO:0009314response to radiation3 (4.11%)0010010001
GO:0006950response to stress3 (4.11%)0000111000
GO:0048364root development3 (4.11%)0001001001
GO:0010053root epidermal cell differentiation3 (4.11%)0001001001
GO:0080147root hair cell development3 (4.11%)0001001001
GO:0048765root hair cell differentiation3 (4.11%)0001001001
GO:0048767root hair elongation3 (4.11%)0001001001
GO:0010015root morphogenesis3 (4.11%)0001001001
GO:0022622root system development3 (4.11%)0001001001
GO:0048316seed development3 (4.11%)0001001001
GO:0044723single-organism carbohydrate metabolic process3 (4.11%)0000110100
GO:0043588skin development3 (4.11%)0001001001
GO:0044281small molecule metabolic process3 (4.11%)0000100200
GO:0010054trichoblast differentiation3 (4.11%)0001001001
GO:0048764trichoblast maturation3 (4.11%)0001001001
GO:0016051carbohydrate biosynthetic process2 (2.74%)0000010100
GO:0015977carbon fixation2 (2.74%)0000000200
GO:0044262cellular carbohydrate metabolic process2 (2.74%)0001010000
GO:0016043cellular component organization2 (2.74%)0000011000
GO:0071840cellular component organization or biogenesis2 (2.74%)0000011000
GO:0044264cellular polysaccharide metabolic process2 (2.74%)0001010000
GO:0016568chromatin modification2 (2.74%)0000011000
GO:0006325chromatin organization2 (2.74%)0000011000
GO:0051276chromosome organization2 (2.74%)0000011000
GO:0016569covalent chromatin modification2 (2.74%)0000011000
GO:0006091generation of precursor metabolites and energy2 (2.74%)0000101000
GO:0016570histone modification2 (2.74%)0000011000
GO:0051701interaction with host2 (2.74%)0000000110
GO:0044419interspecies interaction between organisms2 (2.74%)0000000110
GO:0006811ion transport2 (2.74%)0000010100
GO:0008610lipid biosynthetic process2 (2.74%)0001010000
GO:0040011locomotion2 (2.74%)0000000110
GO:0033036macromolecule localization2 (2.74%)0000020000
GO:0043414macromolecule methylation2 (2.74%)0000011000
GO:0032259methylation2 (2.74%)0000011000
GO:0052192movement in environment of other organism involved in symbiotic interaction2 (2.74%)0000000110
GO:0044000movement in host2 (2.74%)0000000110
GO:0052126movement in host environment2 (2.74%)0000000110
GO:0051814movement in other organism involved in symbiotic interaction2 (2.74%)0000000110
GO:0044764multi-organism cellular process2 (2.74%)0000000110
GO:0051704multi-organism process2 (2.74%)0000000110
GO:0044766multi-organism transport2 (2.74%)0000000110
GO:0010629negative regulation of gene expression2 (2.74%)0000011000
GO:0010605negative regulation of macromolecule metabolic process2 (2.74%)0000011000
GO:0009892negative regulation of metabolic process2 (2.74%)0000011000
GO:0010187negative regulation of seed germination2 (2.74%)0000000110
GO:1901293nucleoside phosphate biosynthetic process2 (2.74%)0000000200
GO:0009165nucleotide biosynthetic process2 (2.74%)0000000200
GO:0006996organelle organization2 (2.74%)0000011000
GO:0071702organic substance transport2 (2.74%)0000020000
GO:1901566organonitrogen compound biosynthetic process2 (2.74%)0000000200
GO:0090407organophosphate biosynthetic process2 (2.74%)0000000200
GO:0005976polysaccharide metabolic process2 (2.74%)0001010000
GO:0006164purine nucleotide biosynthetic process2 (2.74%)0000000200
GO:0006163purine nucleotide metabolic process2 (2.74%)0000000200
GO:0009152purine ribonucleotide biosynthetic process2 (2.74%)0000000200
GO:0009150purine ribonucleotide metabolic process2 (2.74%)0000000200
GO:0072522purine-containing compound biosynthetic process2 (2.74%)0000000200
GO:0072521purine-containing compound metabolic process2 (2.74%)0000000200
GO:0010029regulation of seed germination2 (2.74%)0000000110
GO:1900140regulation of seedling development2 (2.74%)0000000110
GO:0009737response to abscisic acid2 (2.74%)0000010100
GO:0046686response to cadmium ion2 (2.74%)0000010100
GO:0010035response to inorganic substance2 (2.74%)0000010100
GO:0010038response to metal ion2 (2.74%)0000010100
GO:0051707response to other organism2 (2.74%)0000000110
GO:0009615response to virus2 (2.74%)0000000110
GO:0009260ribonucleotide biosynthetic process2 (2.74%)0000000200
GO:0009259ribonucleotide metabolic process2 (2.74%)0000000200
GO:0046390ribose phosphate biosynthetic process2 (2.74%)0000000200
GO:0019693ribose phosphate metabolic process2 (2.74%)0000000200
GO:0009845seed germination2 (2.74%)0000000110
GO:0090351seedling development2 (2.74%)0000000110
GO:0044712single-organism catabolic process2 (2.74%)0000110000
GO:0044765single-organism transport2 (2.74%)0000010100
GO:0044403symbiosis, encompassing mutualism through parasitism2 (2.74%)0000000110
GO:0046794transport of virus2 (2.74%)0000000110
GO:0046740transport of virus in host, cell to cell2 (2.74%)0000000110
GO:0046739transport of virus in multicellular host2 (2.74%)0000000110
GO:0016032viral process2 (2.74%)0000000110
GO:0006754ATP biosynthetic process1 (1.37%)0000000100
GO:0015991ATP hydrolysis coupled proton transport1 (1.37%)0000000100
GO:0046034ATP metabolic process1 (1.37%)0000000100
GO:0015986ATP synthesis coupled proton transport1 (1.37%)0000000100
GO:0006305DNA alkylation1 (1.37%)0000010000
GO:0006259DNA metabolic process1 (1.37%)0000010000
GO:0006306DNA methylation1 (1.37%)0000010000
GO:0044728DNA methylation or demethylation1 (1.37%)0000010000
GO:0006304DNA modification1 (1.37%)0000010000
GO:0006739NADP metabolic process1 (1.37%)0000100000
GO:0006740NADPH regeneration1 (1.37%)0000100000
GO:0080188RNA-directed DNA methylation1 (1.37%)0000010000
GO:0080168abscisic acid transport1 (1.37%)0000010000
GO:0009061anaerobic respiration1 (1.37%)0000001000
GO:0006820anion transport1 (1.37%)0000010000
GO:0046283anthocyanin-containing compound metabolic process1 (1.37%)1000000000
GO:0009785blue light signaling pathway1 (1.37%)0000010000
GO:0009742brassinosteroid mediated signaling pathway1 (1.37%)0000010000
GO:0006171cAMP biosynthetic process1 (1.37%)0000000100
GO:0046058cAMP metabolic process1 (1.37%)0000000100
GO:0016052carbohydrate catabolic process1 (1.37%)0000100000
GO:0046942carboxylic acid transport1 (1.37%)0000010000
GO:0006812cation transport1 (1.37%)0000000100
GO:0007154cell communication1 (1.37%)0000010000
GO:0008283cell proliferation1 (1.37%)0000010000
GO:0034637cellular carbohydrate biosynthetic process1 (1.37%)0000010000
GO:0006073cellular glucan metabolic process1 (1.37%)0001000000
GO:0044255cellular lipid metabolic process1 (1.37%)0000010000
GO:0051641cellular localization1 (1.37%)0000010000
GO:0070727cellular macromolecule localization1 (1.37%)0000010000
GO:0043094cellular metabolic compound salvage1 (1.37%)0000000100
GO:0033692cellular polysaccharide biosynthetic process1 (1.37%)0000010000
GO:0034613cellular protein localization1 (1.37%)0000010000
GO:0045333cellular respiration1 (1.37%)0000001000
GO:0071214cellular response to abiotic stimulus1 (1.37%)0000010000
GO:0097306cellular response to alcohol1 (1.37%)0000010000
GO:0071483cellular response to blue light1 (1.37%)0000010000
GO:0071367cellular response to brassinosteroid stimulus1 (1.37%)0000010000
GO:0070887cellular response to chemical stimulus1 (1.37%)0000010000
GO:0071495cellular response to endogenous stimulus1 (1.37%)0000010000
GO:0032870cellular response to hormone stimulus1 (1.37%)0000010000
GO:0071482cellular response to light stimulus1 (1.37%)0000010000
GO:0071396cellular response to lipid1 (1.37%)0000010000
GO:0071407cellular response to organic cyclic compound1 (1.37%)0000010000
GO:0071310cellular response to organic substance1 (1.37%)0000010000
GO:1901701cellular response to oxygen-containing compound1 (1.37%)0000010000
GO:0071478cellular response to radiation1 (1.37%)0000010000
GO:0071489cellular response to red or far red light1 (1.37%)0000010000
GO:0071383cellular response to steroid hormone stimulus1 (1.37%)0000010000
GO:0051716cellular response to stimulus1 (1.37%)0000010000
GO:0007623circadian rhythm1 (1.37%)0000010000
GO:0006732coenzyme metabolic process1 (1.37%)0000100000
GO:0051186cofactor metabolic process1 (1.37%)0000100000
GO:0009190cyclic nucleotide biosynthetic process1 (1.37%)0000000100
GO:0009187cyclic nucleotide metabolic process1 (1.37%)0000000100
GO:0052652cyclic purine nucleotide metabolic process1 (1.37%)0000000100
GO:0009704de-etiolation1 (1.37%)0000010000
GO:0006952defense response1 (1.37%)0000010000
GO:0009582detection of abiotic stimulus1 (1.37%)0000010000
GO:0009581detection of external stimulus1 (1.37%)0000010000
GO:0009583detection of light stimulus1 (1.37%)0000010000
GO:0051606detection of stimulus1 (1.37%)0000010000
GO:0015988energy coupled proton transmembrane transport, against electrochemical gradient1 (1.37%)0000000100
GO:0015985energy coupled proton transport, down electrochemical gradient1 (1.37%)0000000100
GO:0015980energy derivation by oxidation of organic compounds1 (1.37%)0000001000
GO:0051649establishment of localization in cell1 (1.37%)0000010000
GO:0045184establishment of protein localization1 (1.37%)0000010000
GO:0009812flavonoid metabolic process1 (1.37%)1000000000
GO:0009908flower development1 (1.37%)0000001000
GO:0016458gene silencing1 (1.37%)0000010000
GO:0031047gene silencing by RNA1 (1.37%)0000010000
GO:0044042glucan metabolic process1 (1.37%)0001000000
GO:0006007glucose catabolic process1 (1.37%)0000100000
GO:0006006glucose metabolic process1 (1.37%)0000100000
GO:0006096glycolysis1 (1.37%)0000100000
GO:1901659glycosyl compound biosynthetic process1 (1.37%)0000000100
GO:1901657glycosyl compound metabolic process1 (1.37%)0000000100
GO:0019320hexose catabolic process1 (1.37%)0000100000
GO:0019318hexose metabolic process1 (1.37%)0000100000
GO:0043966histone H3 acetylation1 (1.37%)0000010000
GO:0044154histone H3-K14 acetylation1 (1.37%)0000010000
GO:0043971histone H3-K18 acetylation1 (1.37%)0000010000
GO:0043972histone H3-K23 acetylation1 (1.37%)0000010000
GO:0070734histone H3-K27 methylation1 (1.37%)0000001000
GO:0016573histone acetylation1 (1.37%)0000010000
GO:0034968histone lysine methylation1 (1.37%)0000001000
GO:0016571histone methylation1 (1.37%)0000001000
GO:0009755hormone-mediated signaling pathway1 (1.37%)0000010000
GO:0006818hydrogen transport1 (1.37%)0000000100
GO:0006972hyperosmotic response1 (1.37%)0000001000
GO:0042538hyperosmotic salinity response1 (1.37%)0000001000
GO:0018393internal peptidyl-lysine acetylation1 (1.37%)0000010000
GO:0006475internal protein amino acid acetylation1 (1.37%)0000010000
GO:0006886intracellular protein transport1 (1.37%)0000010000
GO:0030522intracellular receptor signaling pathway1 (1.37%)0000010000
GO:0046907intracellular transport1 (1.37%)0000010000
GO:0034220ion transmembrane transport1 (1.37%)0000000100
GO:0046864isoprenoid transport1 (1.37%)0000010000
GO:0016042lipid catabolic process1 (1.37%)0000010000
GO:0010876lipid localization1 (1.37%)0000010000
GO:0006869lipid transport1 (1.37%)0000010000
GO:0009103lipopolysaccharide biosynthetic process1 (1.37%)0000010000
GO:0009244lipopolysaccharide core region biosynthetic process1 (1.37%)0000010000
GO:0046401lipopolysaccharide core region metabolic process1 (1.37%)0000010000
GO:0008653lipopolysaccharide metabolic process1 (1.37%)0000010000
GO:0010022meristem determinacy1 (1.37%)0000001000
GO:0048507meristem development1 (1.37%)0000001000
GO:0010073meristem maintenance1 (1.37%)0000001000
GO:0015718monocarboxylic acid transport1 (1.37%)0000010000
GO:0046365monosaccharide catabolic process1 (1.37%)0000100000
GO:0005996monosaccharide metabolic process1 (1.37%)0000100000
GO:0015672monovalent inorganic cation transport1 (1.37%)0000000100
GO:0051253negative regulation of RNA metabolic process1 (1.37%)0000001000
GO:0009890negative regulation of biosynthetic process1 (1.37%)0000001000
GO:0031327negative regulation of cellular biosynthetic process1 (1.37%)0000001000
GO:2000113negative regulation of cellular macromolecule biosynthetic process1 (1.37%)0000001000
GO:0031324negative regulation of cellular metabolic process1 (1.37%)0000001000
GO:0048523negative regulation of cellular process1 (1.37%)0000001000
GO:0009910negative regulation of flower development1 (1.37%)0000001000
GO:0010558negative regulation of macromolecule biosynthetic process1 (1.37%)0000001000
GO:0051172negative regulation of nitrogen compound metabolic process1 (1.37%)0000001000
GO:0045934negative regulation of nucleobase-containing compound metabolic process1 (1.37%)0000001000
GO:2000242negative regulation of reproductive process1 (1.37%)0000001000
GO:0045892negative regulation of transcription, DNA-dependent1 (1.37%)0000001000
GO:0046496nicotinamide nucleotide metabolic process1 (1.37%)0000100000
GO:0009163nucleoside biosynthetic process1 (1.37%)0000000100
GO:0009116nucleoside metabolic process1 (1.37%)0000000100
GO:0009124nucleoside monophosphate biosynthetic process1 (1.37%)0000000100
GO:0009123nucleoside monophosphate metabolic process1 (1.37%)0000000100
GO:0009142nucleoside triphosphate biosynthetic process1 (1.37%)0000000100
GO:0009141nucleoside triphosphate metabolic process1 (1.37%)0000000100
GO:0009312oligosaccharide biosynthetic process1 (1.37%)0000010000
GO:0009311oligosaccharide metabolic process1 (1.37%)0000010000
GO:0015849organic acid transport1 (1.37%)0000010000
GO:0015711organic anion transport1 (1.37%)0000010000
GO:0015850organic hydroxy compound transport1 (1.37%)0000010000
GO:0006733oxidoreduction coenzyme metabolic process1 (1.37%)0000100000
GO:0006098pentose-phosphate shunt1 (1.37%)0000100000
GO:0018193peptidyl-amino acid modification1 (1.37%)0000010000
GO:0018394peptidyl-lysine acetylation1 (1.37%)0000010000
GO:0018205peptidyl-lysine modification1 (1.37%)0000010000
GO:0016310phosphorylation1 (1.37%)0000010000
GO:0009640photomorphogenesis1 (1.37%)0000010000
GO:0009853photorespiration1 (1.37%)0000000100
GO:0015979photosynthesis1 (1.37%)0000000100
GO:0019685photosynthesis, dark reaction1 (1.37%)0000000100
GO:0007602phototransduction1 (1.37%)0000010000
GO:0042440pigment metabolic process1 (1.37%)1000000000
GO:0000271polysaccharide biosynthetic process1 (1.37%)0000010000
GO:0006473protein acetylation1 (1.37%)0000010000
GO:0043543protein acylation1 (1.37%)0000010000
GO:0008213protein alkylation1 (1.37%)0000001000
GO:0006457protein folding1 (1.37%)0000010000
GO:0008104protein localization1 (1.37%)0000010000
GO:0006479protein methylation1 (1.37%)0000001000
GO:0006468protein phosphorylation1 (1.37%)0000010000
GO:0015031protein transport1 (1.37%)0000010000
GO:0015992proton transport1 (1.37%)0000000100
GO:0042451purine nucleoside biosynthetic process1 (1.37%)0000000100
GO:0042278purine nucleoside metabolic process1 (1.37%)0000000100
GO:0009127purine nucleoside monophosphate biosynthetic process1 (1.37%)0000000100
GO:0009126purine nucleoside monophosphate metabolic process1 (1.37%)0000000100
GO:0009145purine nucleoside triphosphate biosynthetic process1 (1.37%)0000000100
GO:0009144purine nucleoside triphosphate metabolic process1 (1.37%)0000000100
GO:0046129purine ribonucleoside biosynthetic process1 (1.37%)0000000100
GO:0046128purine ribonucleoside metabolic process1 (1.37%)0000000100
GO:0009168purine ribonucleoside monophosphate biosynthetic process1 (1.37%)0000000100
GO:0009167purine ribonucleoside monophosphate metabolic process1 (1.37%)0000000100
GO:0009206purine ribonucleoside triphosphate biosynthetic process1 (1.37%)0000000100
GO:0009205purine ribonucleoside triphosphate metabolic process1 (1.37%)0000000100
GO:0019362pyridine nucleotide metabolic process1 (1.37%)0000100000
GO:0072524pyridine-containing compound metabolic process1 (1.37%)0000100000
GO:0010017red or far-red light signaling pathway1 (1.37%)0000010000
GO:0009585red, far-red light phototransduction1 (1.37%)0000010000
GO:0019253reductive pentose-phosphate cycle1 (1.37%)0000000100
GO:0051052regulation of DNA metabolic process1 (1.37%)0000010000
GO:0044030regulation of DNA methylation1 (1.37%)0000010000
GO:0032268regulation of cellular protein metabolic process1 (1.37%)0000010000
GO:0042752regulation of circadian rhythm1 (1.37%)0000010000
GO:0009909regulation of flower development1 (1.37%)0000001000
GO:0040029regulation of gene expression, epigenetic1 (1.37%)0000010000
GO:0019220regulation of phosphate metabolic process1 (1.37%)0000010000
GO:0051174regulation of phosphorus metabolic process1 (1.37%)0000010000
GO:0042325regulation of phosphorylation1 (1.37%)0000010000
GO:0051246regulation of protein metabolic process1 (1.37%)0000010000
GO:0031399regulation of protein modification process1 (1.37%)0000010000
GO:0001932regulation of protein phosphorylation1 (1.37%)0000010000
GO:2000241regulation of reproductive process1 (1.37%)0000001000
GO:0048831regulation of shoot system development1 (1.37%)0000001000
GO:0009637response to blue light1 (1.37%)0000010000
GO:0009741response to brassinosteroid1 (1.37%)0000010000
GO:0010200response to chitin1 (1.37%)0000100000
GO:0036293response to decreased oxygen levels1 (1.37%)0000100000
GO:0009605response to external stimulus1 (1.37%)0000010000
GO:0001666response to hypoxia1 (1.37%)0000100000
GO:0080167response to karrikin1 (1.37%)1000000000
GO:1901698response to nitrogen compound1 (1.37%)0000100000
GO:0014070response to organic cyclic compound1 (1.37%)0000010000
GO:0010243response to organonitrogen compound1 (1.37%)0000100000
GO:0006970response to osmotic stress1 (1.37%)0000001000
GO:0070482response to oxygen levels1 (1.37%)0000100000
GO:0009639response to red or far red light1 (1.37%)0000010000
GO:0009651response to salt stress1 (1.37%)0000001000
GO:0048545response to steroid hormone1 (1.37%)0000010000
GO:0048511rhythmic process1 (1.37%)0000010000
GO:0042455ribonucleoside biosynthetic process1 (1.37%)0000000100
GO:0009119ribonucleoside metabolic process1 (1.37%)0000000100
GO:0009156ribonucleoside monophosphate biosynthetic process1 (1.37%)0000000100
GO:0009161ribonucleoside monophosphate metabolic process1 (1.37%)0000000100
GO:0009201ribonucleoside triphosphate biosynthetic process1 (1.37%)0000000100
GO:0009199ribonucleoside triphosphate metabolic process1 (1.37%)0000000100
GO:0007165signal transduction1 (1.37%)0000010000
GO:0023052signaling1 (1.37%)0000010000
GO:0044700single organism signaling1 (1.37%)0000010000
GO:0044724single-organism carbohydrate catabolic process1 (1.37%)0000100000
GO:0043401steroid hormone mediated signaling pathway1 (1.37%)0000010000
GO:0046865terpenoid transport1 (1.37%)0000010000
GO:0055085transmembrane transport1 (1.37%)0000000100

Cellular Component (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005623cell41 (56.16%)10235125643
GO:0044464cell part41 (56.16%)10235125643
GO:0005622intracellular36 (49.32%)10125114642
GO:0044424intracellular part36 (49.32%)10125114642
GO:0043229intracellular organelle32 (43.84%)10115113541
GO:0043226organelle32 (43.84%)10115113541
GO:0043231intracellular membrane-bounded organelle28 (38.36%)10115112430
GO:0043227membrane-bounded organelle28 (38.36%)10115112430
GO:0005737cytoplasm22 (30.14%)1011372322
GO:0044444cytoplasmic part22 (30.14%)1011372322
GO:0005634nucleus18 (24.66%)0001272330
GO:0016020membrane14 (19.18%)0010271201
GO:0005829cytosol9 (12.33%)0001031211
GO:0071944cell periphery8 (10.96%)0011031101
GO:0032991macromolecular complex8 (10.96%)0000001421
GO:0009507chloroplast7 (9.59%)0010320100
GO:0009536plastid7 (9.59%)0010320100
GO:0044446intracellular organelle part6 (8.22%)0000230100
GO:0044422organelle part6 (8.22%)0000230100
GO:0005886plasma membrane6 (8.22%)0010031001
GO:0043232intracellular non-membrane-bounded organelle5 (6.85%)0000001211
GO:0043228non-membrane-bounded organelle5 (6.85%)0000001211
GO:0030529ribonucleoprotein complex5 (6.85%)0000001211
GO:0000932cytoplasmic mRNA processing body4 (5.48%)0000001111
GO:0035770ribonucleoprotein granule4 (5.48%)0000001111
GO:0005732small nucleolar ribonucleoprotein complex4 (5.48%)0000001111
GO:0048046apoplast3 (4.11%)0001010100
GO:0030054cell junction3 (4.11%)0000030000
GO:0005911cell-cell junction3 (4.11%)0000030000
GO:0005576extracellular region3 (4.11%)0001010100
GO:0009506plasmodesma3 (4.11%)0000030000
GO:0043234protein complex3 (4.11%)0000000210
GO:0055044symplast3 (4.11%)0000030000
GO:0005773vacuole3 (4.11%)1000020000
GO:0005794Golgi apparatus2 (2.74%)0000020000
GO:0005618cell wall2 (2.74%)0001000100
GO:0044434chloroplast part2 (2.74%)0000100100
GO:0009570chloroplast stroma2 (2.74%)0000100100
GO:0005783endoplasmic reticulum2 (2.74%)0000020000
GO:0031975envelope2 (2.74%)0000010100
GO:0016281eukaryotic translation initiation factor 4F complex2 (2.74%)0000000110
GO:0030312external encapsulating structure2 (2.74%)0001000100
GO:0031967organelle envelope2 (2.74%)0000010100
GO:0031090organelle membrane2 (2.74%)0000020000
GO:0044435plastid part2 (2.74%)0000100100
GO:0009532plastid stroma2 (2.74%)0000100100
GO:0005774vacuolar membrane2 (2.74%)0000020000
GO:0044437vacuolar part2 (2.74%)0000020000
GO:0009941chloroplast envelope1 (1.37%)0000000100
GO:0009534chloroplast thylakoid1 (1.37%)0000000100
GO:0009535chloroplast thylakoid membrane1 (1.37%)0000000100
GO:0044445cytosolic part1 (1.37%)0000000100
GO:0022626cytosolic ribosome1 (1.37%)0000000100
GO:0012505endomembrane system1 (1.37%)0000010000
GO:0044425membrane part1 (1.37%)0000000100
GO:0042579microbody1 (1.37%)1000000000
GO:0005635nuclear envelope1 (1.37%)0000010000
GO:0031965nuclear membrane1 (1.37%)0000010000
GO:0044428nuclear part1 (1.37%)0000010000
GO:0031984organelle subcompartment1 (1.37%)0000000100
GO:0005777peroxisome1 (1.37%)1000000000
GO:0034357photosynthetic membrane1 (1.37%)0000000100
GO:0009526plastid envelope1 (1.37%)0000000100
GO:0031976plastid thylakoid1 (1.37%)0000000100
GO:0055035plastid thylakoid membrane1 (1.37%)0000000100
GO:0010287plastoglobule1 (1.37%)0000000100
GO:0045259proton-transporting ATP synthase complex1 (1.37%)0000000100
GO:0045261proton-transporting ATP synthase complex, catalytic core F(1)1 (1.37%)0000000100
GO:0016469proton-transporting two-sector ATPase complex1 (1.37%)0000000100
GO:0033178proton-transporting two-sector ATPase complex, catalytic domain1 (1.37%)0000000100
GO:0005840ribosome1 (1.37%)0000000100
GO:0009579thylakoid1 (1.37%)0000000100
GO:0042651thylakoid membrane1 (1.37%)0000000100
GO:0044436thylakoid part1 (1.37%)0000000100