MapMan terms associated with a binding site

Binding site
Motif_18
Name
5659BOXLELAT5659
Description
56/59 box; A sequence motif shared between the tomato LAT(Late Anther Tomato)56 and LAT59 promoters; Found in -103 to -94 in LAT56 and in -114 to -105 in LAT59; Involved in modulating the activity of the LAT gene promoters in pollen
#Associated genes
107
#Associated MapMan terms
82

Click table-header(s) to enable sorting
MapMan Description #Associated genes ath bra cme egr gma ptr ppe sly stu vvi
27RNA25 (23.36%)1001863204
27.3RNA.regulation of transcription19 (17.76%)0000753103
26misc9 (8.41%)0101122002
29protein9 (8.41%)1000401003
30signalling7 (6.54%)0001320001
28DNA6 (5.61%)0101310000
27.3.21RNA.regulation of transcription.GRAS transcription factor family5 (4.67%)0000101102
29.4protein.postranslational modification5 (4.67%)0000201002
30.2signalling.receptor kinases5 (4.67%)0001300001
20stress4 (3.74%)0000021100
27.1RNA.processing4 (3.74%)1001110000
20.2stress.abiotic3 (2.80%)0000020100
27.3.6RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family3 (2.80%)0000111000
27.3.67RNA.regulation of transcription.putative transcription regulator3 (2.80%)0000300000
28.1DNA.synthesis/chromatin structure3 (2.80%)0100110000
29.4.1protein.postranslational modification.kinase3 (2.80%)0000200001
33development3 (2.80%)0001010001
33.99development.unspecified3 (2.80%)0001010001
19tetrapyrrole synthesis2 (1.87%)0000020000
19.40tetrapyrrole synthesis.regulation2 (1.87%)0000020000
20.2.3stress.abiotic.drought/salt2 (1.87%)0000010100
26.4misc.beta 1,3 glucan hydrolases2 (1.87%)0000001001
27.3.20RNA.regulation of transcription.G2-like transcription factor family, GARP2 (1.87%)0000110000
28.2DNA.repair2 (1.87%)0001100000
29.4.1.57protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII2 (1.87%)0000200000
29.5protein.degradation2 (1.87%)0000100001
30.2.11signalling.receptor kinases.leucine rich repeat XI2 (1.87%)0001100000
30.2.99signalling.receptor kinases.misc2 (1.87%)0000200000
30.3signalling.calcium2 (1.87%)0000020000
31cell2 (1.87%)0000002000
34transport2 (1.87%)0100010000
8TCA / org transformation1 (0.93%)0000100000
9mitochondrial electron transport / ATP synthesis1 (0.93%)0000000100
10cell wall1 (0.93%)0000010000
10.1cell wall.precursor synthesis1 (0.93%)0000010000
10.1.6cell wall.precursor synthesis.GAE1 (0.93%)0000010000
13.1.3.4.12amino acid metabolism.synthesis.aspartate family.methionine.homocysteine S-methyltransferase1 (0.93%)1000000000
17hormone metabolism1 (0.93%)0000010000
17.5hormone metabolism.ethylene1 (0.93%)0000010000
17.5.3hormone metabolism.ethylene.induced-regulated-responsive-activated1 (0.93%)0000010000
18Co-factor and vitamine metabolism1 (0.93%)1000000000
18.1Co-factor and vitamine metabolism.molybdenum cofactor1 (0.93%)1000000000
18.1.1Co-factor and vitamine metabolism.molybdenum cofactor.gephyrin1 (0.93%)1000000000
20.1stress.biotic1 (0.93%)0000001000
20.2.2stress.abiotic.cold1 (0.93%)0000010000
23nucleotide metabolism1 (0.93%)0000000001
23.5nucleotide metabolism.deoxynucleotide metabolism1 (0.93%)0000000001
23.5.3nucleotide metabolism.deoxynucleotide metabolism.cytosine deaminase1 (0.93%)0000000001
8.1TCA / org transformation.TCA1 (0.93%)0000100000
9.7mitochondrial electron transport / ATP synthesis.cytochrome c oxidase1 (0.93%)0000000100
26.10misc.cytochrome P4501 (0.93%)0000010000
26.12misc.peroxidases1 (0.93%)0000000001
26.18misc.invertase/pectin methylesterase inhibitor family protein1 (0.93%)0000100000
26.2misc.UDP glucosyl and glucoronyl transferases1 (0.93%)0000010000
26.3.2misc.gluco-, galacto- and mannosidases.beta-galactosidase1 (0.93%)0001000000
26.30misc. other Ferredoxins and Rieske domain1 (0.93%)0100000000
26.3misc.gluco-, galacto- and mannosidases1 (0.93%)0001000000
26.7misc.oxidases - copper, flavone etc1 (0.93%)0000001000
27.2RNA.transcription1 (0.93%)0000000100
27.3.22RNA.regulation of transcription.HB,Homeobox transcription factor family1 (0.93%)0000100000
27.3.32RNA.regulation of transcription.WRKY domain transcription factor family1 (0.93%)0000010000
27.3.35RNA.regulation of transcription.bZIP transcription factor family1 (0.93%)0000010000
27.3.4RNA.regulation of transcription.ARF, Auxin Response Factor family1 (0.93%)0000000001
27.3.50RNA.regulation of transcription.General Transcription1 (0.93%)0000010000
27.3.99RNA.regulation of transcription.unclassified1 (0.93%)0000001000
27.4RNA.RNA binding1 (0.93%)0000000001
28.1.3DNA.synthesis/chromatin structure.histone1 (0.93%)0000100000
28.99DNA.unspecified1 (0.93%)0000100000
29.3protein.targeting1 (0.93%)0000100000
29.3.4protein.targeting.secretory pathway1 (0.93%)0000100000
29.3.4.2protein.targeting.secretory pathway.golgi1 (0.93%)0000100000
29.5.11protein.degradation.ubiquitin1 (0.93%)0000000001
29.5.11.20protein.degradation.ubiquitin.proteasom1 (0.93%)0000000001
29.5.11.4.2protein.degradation.ubiquitin.E3.RING1 (0.93%)1000000000
29.5.9protein.degradation.AAA type1 (0.93%)0000100000
29.8protein.assembly and cofactor ligation1 (0.93%)1000000000
30.2.17signalling.receptor kinases.DUF 261 (0.93%)0000000001
31.1cell.organisation1 (0.93%)0000001000
31.3cell.cycle1 (0.93%)0000001000
34.7transport.phosphate1 (0.93%)0000010000
34.9transport.metabolite transporters at the mitochondrial membrane1 (0.93%)0100000000
8.1.3TCA / org transformation.TCA.aconitase1 (0.93%)0000100000