PLAZA 3.0 Dicots : Binding Sites

InterPro domains associated with a binding site

Binding site: Motif_178
Name: MRNA3ENDTAH3
Description: Cis element in 3' end region of wheat histone H3 mRNA; 3' end formation; Also found in histone genes of other plants, yeast

#Associated genes: 101
#Associated InterPro terms: 171

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InterPro	Description	#Associated genes	ath	bra	cme	egr	gma	ptr	ppe	sly	stu	vvi
IPR000719	Protein kinase domain	6 (5.94%)	0	0	0	1	0	1	1	0	0	3
IPR011009	Protein kinase-like domain	6 (5.94%)	0	0	0	1	0	1	1	0	0	3
IPR003311	AUX/IAA protein	5 (4.95%)	0	0	0	0	2	2	0	0	0	1
IPR011525	Aux/IAA-ARF-dimerisation	5 (4.95%)	0	0	0	0	2	2	0	0	0	1
IPR010525	Auxin response factor	4 (3.96%)	0	0	0	0	2	1	0	0	0	1
IPR003340	B3 DNA binding domain	4 (3.96%)	0	0	0	0	2	1	0	0	0	1
IPR015300	DNA-binding pseudobarrel domain	4 (3.96%)	0	0	0	0	2	1	0	0	0	1
IPR012677	Nucleotide-binding, alpha-beta plait	4 (3.96%)	0	0	1	0	0	2	1	0	0	0
IPR000504	RNA recognition motif domain	4 (3.96%)	0	0	1	0	0	2	1	0	0	0
IPR001245	Serine-threonine/tyrosine-protein kinase catalytic domain	4 (3.96%)	0	0	0	0	0	1	1	0	0	2
IPR002290	Serine/threonine- / dual specificity protein kinase, catalytic domain	4 (3.96%)	0	0	0	1	0	0	1	0	0	2
IPR008271	Serine/threonine-protein kinase, active site	4 (3.96%)	0	0	0	1	0	0	1	0	0	2
IPR013083	Zinc finger, RING/FYVE/PHD-type	4 (3.96%)	0	0	1	0	0	2	0	0	1	0
IPR013320	Concanavalin A-like lectin/glucanase, subgroup	3 (2.97%)	1	0	0	0	0	0	1	0	0	1
IPR013785	Aldolase-type TIM barrel	2 (1.98%)	0	0	0	0	0	0	0	1	1	0
IPR009818	Ataxin-2, C-terminal	2 (1.98%)	0	0	1	0	0	1	0	0	0	0
IPR004827	Basic-leucine zipper domain	2 (1.98%)	0	0	0	1	0	1	0	0	0	0
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	2 (1.98%)	0	0	0	2	0	0	0	0	0	0
IPR001025	Bromo adjacent homology (BAH) domain	2 (1.98%)	0	0	0	0	1	0	0	0	1	0
IPR004282	Chloroplast envelope membrane protein, CemA	2 (1.98%)	0	0	0	2	0	0	0	0	0	0
IPR019142	Dymeclin	2 (1.98%)	0	1	0	0	0	1	0	0	0	0
IPR017853	Glycoside hydrolase, superfamily	2 (1.98%)	1	0	0	0	0	0	0	0	1	0
IPR009057	Homeodomain-like	2 (1.98%)	0	0	0	0	1	1	0	0	0	0
IPR009743	Hs1pro-1, C-terminal	2 (1.98%)	0	0	1	0	0	1	0	0	0	0
IPR009869	Hs1pro-1, N-terminal	2 (1.98%)	0	0	1	0	0	1	0	0	0	0
IPR014756	Immunoglobulin E-set	2 (1.98%)	0	0	0	0	0	0	0	1	1	0
IPR005824	KOW	2 (1.98%)	0	0	0	0	0	0	1	0	0	1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	2 (1.98%)	0	0	0	1	1	0	0	0	0	0
IPR003441	NAC domain	2 (1.98%)	0	0	0	0	0	1	0	0	1	0
IPR000484	Photosynthetic reaction centre, L/M	2 (1.98%)	0	0	0	0	0	2	0	0	0	0
IPR005867	Photosystem II protein D1	2 (1.98%)	0	0	0	0	0	2	0	0	0	0
IPR000528	Plant lipid transfer protein/Par allergen	2 (1.98%)	0	0	0	2	0	0	0	0	0	0
IPR022143	Protein of unknown function DUF3675	2 (1.98%)	0	0	0	0	0	2	0	0	0	0
IPR025322	Protein of unknown function DUF4228, plant	2 (1.98%)	0	0	0	0	0	1	1	0	0	0
IPR006734	Protein of unknown function DUF597	2 (1.98%)	0	0	0	0	0	1	1	0	0	0
IPR000406	RHO protein GDP dissociation inhibitor	2 (1.98%)	0	0	0	0	0	0	0	1	1	0
IPR024792	Rho GDP-dissociation inhibitor domain	2 (1.98%)	0	0	0	0	0	0	0	1	1	0
IPR014722	Ribosomal protein L2 domain 2	2 (1.98%)	0	0	0	0	0	0	1	0	0	1
IPR003256	Ribosomal protein L24	2 (1.98%)	0	0	0	0	0	0	1	0	0	1
IPR005825	Ribosomal protein L24/L26, conserved site	2 (1.98%)	0	0	0	0	0	0	1	0	0	1
IPR001938	Thaumatin	2 (1.98%)	1	0	0	0	1	0	0	0	0	0
IPR017949	Thaumatin, conserved site	2 (1.98%)	1	0	0	0	1	0	0	0	0	0
IPR017887	Transcription factor TCP subgroup	2 (1.98%)	0	0	0	0	0	0	0	1	1	0
IPR005333	Transcription factor, TCP	2 (1.98%)	0	0	0	0	0	0	0	1	1	0
IPR008991	Translation protein SH3-like domain	2 (1.98%)	0	0	0	0	0	0	1	0	0	1
IPR009003	Trypsin-like cysteine/serine peptidase domain	2 (1.98%)	0	0	0	0	1	0	0	0	0	1
IPR006461	Uncharacterised protein family Cys-rich	2 (1.98%)	1	0	0	0	0	0	1	0	0	0
IPR011016	Zinc finger, RING-CH-type	2 (1.98%)	0	0	0	0	0	2	0	0	0	0
IPR000711	ATPase, F1 complex, OSCP/delta subunit	1 (0.99%)	0	1	0	0	0	0	0	0	0	0
IPR020781	ATPase, F1 complex, OSCP/delta subunit, conserved site	1 (0.99%)	0	1	0	0	0	0	0	0	0	0
IPR023307	Aerolysin-like toxin, beta complex domain	1 (0.99%)	0	0	1	0	0	0	0	0	0	0
IPR008395	Agenet-like domain	1 (0.99%)	0	0	0	0	1	0	0	0	0	0
IPR008998	Agglutinin	1 (0.99%)	0	0	1	0	0	0	0	0	0	0
IPR009006	Alanine racemase/group IV decarboxylase, C-terminal	1 (0.99%)	0	0	0	0	0	0	0	0	0	1
IPR002937	Amine oxidase	1 (0.99%)	0	0	0	0	1	0	0	0	0	0
IPR002110	Ankyrin repeat	1 (0.99%)	0	0	0	0	1	0	0	0	0	0
IPR020683	Ankyrin repeat-containing domain	1 (0.99%)	0	0	0	0	1	0	0	0	0	0
IPR023271	Aquaporin-like	1 (0.99%)	0	0	0	0	0	0	1	0	0	0
IPR002985	Arginine decarboxylase	1 (0.99%)	0	0	0	0	0	0	0	0	0	1
IPR001962	Asparagine synthase	1 (0.99%)	0	0	0	0	0	0	0	0	1	0
IPR006426	Asparagine synthase, glutamine-hydrolyzing	1 (0.99%)	0	0	0	0	0	0	0	0	1	0
IPR002453	Beta tubulin	1 (0.99%)	0	0	0	0	0	0	0	1	0	0
IPR013838	Beta tubulin, autoregulation binding site	1 (0.99%)	0	0	0	0	0	0	0	1	0	0
IPR003675	CAAX amino terminal protease	1 (0.99%)	0	0	0	0	0	0	0	1	0	0
IPR012416	Calmodulin binding protein-like	1 (0.99%)	0	0	0	0	0	0	0	0	0	1
IPR001715	Calponin homology domain	1 (0.99%)	0	0	0	0	0	0	0	1	0	0
IPR006539	Cation-transporting P-type ATPase, subfamily IV	1 (0.99%)	0	0	0	0	1	0	0	0	0	0
IPR001757	Cation-transporting P-type ATPase	1 (0.99%)	0	0	0	0	1	0	0	0	0	0
IPR005150	Cellulose synthase	1 (0.99%)	0	0	1	0	0	0	0	0	0	0
IPR027934	Cellulose synthase, RING-type zinc finger	1 (0.99%)	0	0	1	0	0	0	0	0	0	0
IPR000583	Class II glutamine amidotransferase domain	1 (0.99%)	0	0	0	0	0	0	0	0	1	0
IPR006769	Coiled-coil domain containing protein 109, C-terminal	1 (0.99%)	1	0	0	0	0	0	0	0	0	0
IPR008985	Concanavalin A-like lectin/glucanases superfamily	1 (0.99%)	1	0	0	0	0	0	0	0	0	0
IPR004367	Cyclin, C-terminal domain	1 (0.99%)	0	0	1	0	0	0	0	0	0	0
IPR006671	Cyclin, N-terminal	1 (0.99%)	0	0	1	0	0	0	0	0	0	0
IPR013763	Cyclin-like	1 (0.99%)	0	0	1	0	0	0	0	0	0	0
IPR003657	DNA-binding WRKY	1 (0.99%)	0	0	0	0	0	1	0	0	0	0
IPR024937	Domain X	1 (0.99%)	0	0	0	0	0	1	0	0	0	0
IPR004314	Domain of unknown function DUF239	1 (0.99%)	0	0	0	0	1	0	0	0	0	0
IPR025521	Domain of unknown function DUF4409	1 (0.99%)	0	0	0	0	1	0	0	0	0	0
IPR011992	EF-hand domain pair	1 (0.99%)	0	0	0	0	0	0	0	1	0	0
IPR005539	ELK	1 (0.99%)	0	0	0	0	1	0	0	0	0	0
IPR000941	Enolase	1 (0.99%)	0	0	1	0	0	0	0	0	0	0
IPR020810	Enolase, C-terminal	1 (0.99%)	0	0	1	0	0	0	0	0	0	0
IPR020811	Enolase, N-terminal	1 (0.99%)	0	0	1	0	0	0	0	0	0	0
IPR020809	Enolase, conserved site	1 (0.99%)	0	0	1	0	0	0	0	0	0	0
IPR026015	F1F0 ATP synthase OSCP/delta subunit, N-terminal domain	1 (0.99%)	0	1	0	0	0	0	0	0	0	0
IPR026891	Fibronectin type III-like domain	1 (0.99%)	1	0	0	0	0	0	0	0	0	0
IPR020472	G-protein beta WD-40 repeat	1 (0.99%)	0	0	0	0	0	1	0	0	0	0
IPR015916	Galactose oxidase, beta-propeller	1 (0.99%)	0	0	0	0	1	0	0	0	0	0
IPR017932	Glutamine amidotransferase type 2 domain	1 (0.99%)	0	0	0	0	0	0	0	0	1	0
IPR026892	Glycoside hydrolase family 3	1 (0.99%)	1	0	0	0	0	0	0	0	0	0
IPR002772	Glycoside hydrolase family 3 C-terminal domain	1 (0.99%)	1	0	0	0	0	0	0	0	0	0
IPR013781	Glycoside hydrolase, catalytic domain	1 (0.99%)	0	0	0	0	0	0	1	0	0	0
IPR000757	Glycoside hydrolase, family 16	1 (0.99%)	1	0	0	0	0	0	0	0	0	0
IPR001764	Glycoside hydrolase, family 3, N-terminal	1 (0.99%)	1	0	0	0	0	0	0	0	0	0
IPR008811	Glycosyl hydrolases 36	1 (0.99%)	0	0	0	0	0	0	0	0	1	0
IPR023214	HAD-like domain	1 (0.99%)	0	0	0	0	1	0	0	0	0	0
IPR001305	Heat shock protein DnaJ, cysteine-rich domain	1 (0.99%)	0	0	0	0	0	0	0	0	1	0
IPR006121	Heavy metal-associated domain, HMA	1 (0.99%)	0	0	0	0	1	0	0	0	0	0
IPR008422	Homeobox KN domain	1 (0.99%)	0	0	0	0	1	0	0	0	0	0
IPR001356	Homeobox domain	1 (0.99%)	0	0	0	0	1	0	0	0	0	0
IPR017970	Homeobox, conserved site	1 (0.99%)	0	0	0	0	1	0	0	0	0	0
IPR006455	Homeodomain, ZF-HD class	1 (0.99%)	0	0	0	0	0	1	0	0	0	0
IPR003855	K+ potassium transporter	1 (0.99%)	0	0	0	0	0	0	1	0	0	0
IPR005540	KNOX1	1 (0.99%)	0	0	0	0	1	0	0	0	0	0
IPR005541	KNOX2	1 (0.99%)	0	0	0	0	1	0	0	0	0	0
IPR006652	Kelch repeat type 1	1 (0.99%)	0	0	0	0	1	0	0	0	0	0
IPR002921	Lipase, class 3	1 (0.99%)	1	0	0	0	0	0	0	0	0	0
IPR000425	Major intrinsic protein	1 (0.99%)	0	0	0	0	0	0	1	0	0	0
IPR022357	Major intrinsic protein, conserved site	1 (0.99%)	0	0	0	0	0	0	1	0	0	0
IPR002866	Maturase MatK	1 (0.99%)	0	0	0	0	0	1	0	0	0	0
IPR024942	Maturase MatK, N-terminal domain	1 (0.99%)	0	0	0	0	0	1	0	0	0	0
IPR022643	Orn/DAP/Arg decarboxylase 2, C-terminal	1 (0.99%)	0	0	0	0	0	0	0	0	0	1
IPR022644	Orn/DAP/Arg decarboxylase 2, N-terminal	1 (0.99%)	0	0	0	0	0	0	0	0	0	1
IPR022657	Orn/DAP/Arg decarboxylase 2, conserved site	1 (0.99%)	0	0	0	0	0	0	0	0	0	1
IPR000183	Ornithine/DAP/Arg decarboxylase	1 (0.99%)	0	0	0	0	0	0	0	0	0	1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	1 (0.99%)	0	0	1	0	0	0	0	0	0	0
IPR008250	P-type ATPase, A domain	1 (0.99%)	0	0	0	0	1	0	0	0	0	0
IPR023299	P-type ATPase, cytoplasmic domain N	1 (0.99%)	0	0	0	0	1	0	0	0	0	0
IPR018303	P-type ATPase, phosphorylation site	1 (0.99%)	0	0	0	0	1	0	0	0	0	0
IPR001478	PDZ domain	1 (0.99%)	0	0	0	0	0	0	0	0	0	1
IPR001940	Peptidase S1C	1 (0.99%)	0	0	0	0	0	0	0	0	0	1
IPR000270	Phox/Bem1p	1 (0.99%)	0	0	0	1	0	0	0	0	0	0
IPR017441	Protein kinase, ATP binding site	1 (0.99%)	0	0	0	1	0	0	0	0	0	0
IPR009741	Protein of unknown function DUF1313	1 (0.99%)	0	0	0	0	1	0	0	0	0	0
IPR006873	Protein of unknown function DUF620	1 (0.99%)	0	0	1	0	0	0	0	0	0	0
IPR015655	Protein phosphatase 2C	1 (0.99%)	0	0	0	0	0	0	0	0	0	1
IPR001932	Protein phosphatase 2C (PP2C)-like domain	1 (0.99%)	0	0	0	0	0	0	0	0	0	1
IPR000222	Protein phosphatase 2C, manganese/magnesium aspartate binding site	1 (0.99%)	0	0	0	0	0	0	0	0	0	1
IPR000195	Rab-GTPase-TBC domain	1 (0.99%)	0	0	0	0	0	1	0	0	0	0
IPR002041	Ran GTPase	1 (0.99%)	0	0	1	0	0	0	0	0	0	0
IPR009091	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	1 (0.99%)	0	0	0	0	0	1	0	0	0	0
IPR000408	Regulator of chromosome condensation, RCC1	1 (0.99%)	0	0	0	0	0	1	0	0	0	0
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	1 (0.99%)	0	0	0	0	0	0	0	0	1	0
IPR005225	Small GTP-binding protein domain	1 (0.99%)	0	0	1	0	0	0	0	0	0	0
IPR001806	Small GTPase superfamily	1 (0.99%)	0	0	1	0	0	0	0	0	0	0
IPR003579	Small GTPase superfamily, Rab type	1 (0.99%)	0	0	1	0	0	0	0	0	0	0
IPR020849	Small GTPase superfamily, Ras type	1 (0.99%)	0	0	1	0	0	0	0	0	0	0
IPR003578	Small GTPase superfamily, Rho type	1 (0.99%)	0	0	1	0	0	0	0	0	0	0
IPR009737	Sucraseferredoxin-like	1 (0.99%)	0	0	0	0	1	0	0	0	0	0
IPR011990	Tetratricopeptide-like helical	1 (0.99%)	0	0	0	0	0	1	0	0	0	0
IPR012336	Thioredoxin-like fold	1 (0.99%)	0	0	0	0	1	0	0	0	0	0
IPR005202	Transcription factor GRAS	1 (0.99%)	0	0	0	0	0	1	0	0	0	0
IPR025610	Transcription factor MYC/MYB N-terminal	1 (0.99%)	0	0	0	0	1	0	0	0	0	0
IPR025422	Transcription factor TGA like domain	1 (0.99%)	0	0	0	1	0	0	0	0	0	0
IPR008856	Translocon-associated protein subunit beta	1 (0.99%)	0	1	0	0	0	0	0	0	0	0
IPR000217	Tubulin	1 (0.99%)	0	0	0	0	0	0	0	1	0	0
IPR023123	Tubulin, C-terminal	1 (0.99%)	0	0	0	0	0	0	0	1	0	0
IPR017975	Tubulin, conserved site	1 (0.99%)	0	0	0	0	0	0	0	1	0	0
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	1 (0.99%)	0	0	0	0	0	0	0	1	0	0
IPR008280	Tubulin/FtsZ, C-terminal	1 (0.99%)	0	0	0	0	0	0	0	1	0	0
IPR003008	Tubulin/FtsZ, GTPase domain	1 (0.99%)	0	0	0	0	0	0	0	1	0	0
IPR014002	Tudor-like, plant	1 (0.99%)	0	0	0	0	1	0	0	0	0	0
IPR001680	WD40 repeat	1 (0.99%)	0	0	0	0	0	1	0	0	0	0
IPR017986	WD40-repeat-containing domain	1 (0.99%)	0	0	0	0	0	1	0	0	0	0
IPR015943	WD40/YVTN repeat-like-containing domain	1 (0.99%)	0	0	0	0	0	1	0	0	0	0
IPR012946	X8	1 (0.99%)	0	0	0	0	0	0	1	0	0	0
IPR010713	Xyloglucan endo-transglycosylase, C-terminal	1 (0.99%)	1	0	0	0	0	0	0	0	0	0
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	1 (0.99%)	0	0	0	0	0	1	0	0	0	0
IPR000058	Zinc finger, AN1-type	1 (0.99%)	0	0	0	0	0	0	0	0	1	0
IPR000315	Zinc finger, B-box	1 (0.99%)	0	0	0	0	0	0	1	0	0	0
IPR000571	Zinc finger, CCCH-type	1 (0.99%)	0	0	0	0	1	0	0	0	0	0
IPR001878	Zinc finger, CCHC-type	1 (0.99%)	0	0	0	0	0	0	1	0	0	0
IPR011011	Zinc finger, FYVE/PHD-type	1 (0.99%)	0	0	0	0	0	0	0	0	1	0
IPR019787	Zinc finger, PHD-finger	1 (0.99%)	0	0	0	0	0	0	0	0	1	0
IPR001965	Zinc finger, PHD-type	1 (0.99%)	0	0	0	0	0	0	0	0	1	0
IPR019786	Zinc finger, PHD-type, conserved site	1 (0.99%)	0	0	0	0	0	0	0	0	1	0
IPR001841	Zinc finger, RING-type	1 (0.99%)	0	0	1	0	0	0	0	0	0	0
IPR001269	tRNA-dihydrouridine synthase	1 (0.99%)	0	0	0	0	0	0	0	1	0	0
IPR018517	tRNA-dihydrouridine synthase, conserved site	1 (0.99%)	0	0	0	0	0	0	0	1	0	0