PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Motif_159
Name: LFY
Description: Structural basis for LEAFY floral switch function and similarity with helix-turn-helix proteins

#Associated genes: 276
#Associated MapMan terms: 133

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	47 (17.03%)	2	3	2	7	18	9	2	4
27.3	RNA.regulation of transcription	40 (14.49%)	2	3	2	5	16	7	2	3
29	protein	28 (10.14%)	7	1	1	6	2	7	2	2
33	development	20 (7.25%)	2	1	1	2	5	4	2	3
29.4	protein.postranslational modification	19 (6.88%)	3	1	1	4	1	6	1	2
30	signalling	16 (5.80%)	1	0	1	3	4	4	2	1
26	misc	15 (5.43%)	2	1	1	6	4	0	1	0
33.99	development.unspecified	14 (5.07%)	2	0	1	2	4	2	1	2
31	cell	12 (4.35%)	1	0	1	3	0	3	1	3
17	hormone metabolism	9 (3.26%)	2	2	1	1	1	2	0	0
10	cell wall	8 (2.90%)	0	0	0	3	1	1	2	1
30.2	signalling.receptor kinases	8 (2.90%)	0	0	1	2	2	1	1	1
31.1	cell.organisation	7 (2.54%)	0	0	0	2	0	2	1	2
17.2	hormone metabolism.auxin	6 (2.17%)	2	2	0	0	1	1	0	0
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	6 (2.17%)	0	1	0	0	4	1	0	0
33.3	development.squamosa promoter binding like (SPL)	6 (2.17%)	0	1	0	0	1	2	1	1
10.6	cell wall.degradation	5 (1.81%)	0	0	0	3	1	0	1	0
16	secondary metabolism	5 (1.81%)	2	1	2	0	0	0	0	0
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	5 (1.81%)	1	2	0	0	1	1	0	0
20	stress	5 (1.81%)	1	0	2	0	0	1	0	1
29.5	protein.degradation	5 (1.81%)	1	0	0	2	0	1	1	0
34	transport	5 (1.81%)	1	0	1	0	2	0	1	0
20.2	stress.abiotic	4 (1.45%)	1	0	1	0	0	1	0	1
27.1	RNA.processing	4 (1.45%)	0	0	0	1	2	1	0	0
27.1.1	RNA.processing.splicing	4 (1.45%)	0	0	0	1	2	1	0	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	4 (1.45%)	1	1	0	0	2	0	0	0
29.4.1	protein.postranslational modification.kinase	4 (1.45%)	0	0	0	0	0	3	0	1
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	4 (1.45%)	0	0	0	0	0	3	0	1
30.11	signalling.light	4 (1.45%)	1	0	0	1	0	1	1	0
30.2.11	signalling.receptor kinases.leucine rich repeat XI	4 (1.45%)	0	0	0	2	1	0	1	0
30.2.17	signalling.receptor kinases.DUF 26	4 (1.45%)	0	0	1	0	1	1	0	1
2	major CHO metabolism	3 (1.09%)	0	0	1	1	0	1	0	0
10.6.1	cell wall.degradation.cellulases and beta -1,4-glucanases	3 (1.09%)	0	0	0	3	0	0	0	0
2.2	major CHO metabolism.degradation	3 (1.09%)	0	0	1	1	0	1	0	0
2.2.2	major CHO metabolism.degradation.starch	3 (1.09%)	0	0	1	1	0	1	0	0
2.2.2.1	major CHO metabolism.degradation.starch.starch cleavage	3 (1.09%)	0	0	1	1	0	1	0	0
2.2.2.1.2	major CHO metabolism.degradation.starch.starch cleavage.beta amylase	3 (1.09%)	0	0	1	1	0	1	0	0
20.2.1	stress.abiotic.heat	3 (1.09%)	0	0	1	0	0	1	0	1
26.3	misc.gluco-, galacto- and mannosidases	3 (1.09%)	0	0	0	3	0	0	0	0
26.3.4	misc.gluco-, galacto- and mannosidases.endoglucanase	3 (1.09%)	0	0	0	3	0	0	0	0
27.3.21	RNA.regulation of transcription.GRAS transcription factor family	3 (1.09%)	0	0	0	0	2	1	0	0
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	3 (1.09%)	0	0	0	2	0	1	0	0
27.3.99	RNA.regulation of transcription.unclassified	3 (1.09%)	0	0	0	0	2	1	0	0
27.4	RNA.RNA binding	3 (1.09%)	0	0	0	1	0	1	0	1
28	DNA	3 (1.09%)	0	0	0	1	1	0	1	0
29.5.11	protein.degradation.ubiquitin	3 (1.09%)	0	0	0	2	0	1	0	0
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	3 (1.09%)	0	0	0	1	1	1	0	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	3 (1.09%)	2	1	0	0	0	0	0	0
1	PS	2 (0.72%)	0	0	0	0	1	0	1	0
1.3	PS.calvin cycle	2 (0.72%)	0	0	0	0	1	0	1	0
1.3.6	PS.calvin cycle.aldolase	2 (0.72%)	0	0	0	0	1	0	1	0
8	TCA / org transformation	2 (0.72%)	0	2	0	0	0	0	0	0
15	metal handling	2 (0.72%)	0	0	0	1	1	0	0	0
15.2	metal handling.binding, chelation and storage	2 (0.72%)	0	0	0	1	1	0	0	0
16.10	secondary metabolism.simple phenols	2 (0.72%)	0	0	2	0	0	0	0	0
16.2	secondary metabolism.phenylpropanoids	2 (0.72%)	2	0	0	0	0	0	0	0
17.4	hormone metabolism.cytokinin	2 (0.72%)	0	0	0	1	0	1	0	0
26.10	misc.cytochrome P450	2 (0.72%)	1	0	0	1	0	0	0	0
26.2	misc.UDP glucosyl and glucoronyl transferases	2 (0.72%)	0	0	0	0	1	0	1	0
26.22	misc.short chain dehydrogenase/reductase (SDR)	2 (0.72%)	0	1	0	1	0	0	0	0
26.4	misc.beta 1,3 glucan hydrolases	2 (0.72%)	0	0	0	1	1	0	0	0
27.3.37	RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family	2 (0.72%)	0	1	0	0	0	1	0	0
27.3.44	RNA.regulation of transcription.Chromatin Remodeling Factors	2 (0.72%)	0	0	0	0	0	1	0	1
27.3.66	RNA.regulation of transcription.Psudo ARR transcription factor family	2 (0.72%)	0	0	0	0	2	0	0	0
28.1	DNA.synthesis/chromatin structure	2 (0.72%)	0	0	0	0	1	0	1	0
29.3	protein.targeting	2 (0.72%)	2	0	0	0	0	0	0	0
30.4	signalling.phosphinositides	2 (0.72%)	0	0	0	0	1	1	0	0
30.4.2	signalling.phosphinositides.phosphatidylinositol 4-kinase	2 (0.72%)	0	0	0	0	1	1	0	0
8.3	TCA / org transformation.carbonic anhydrases	2 (0.72%)	0	2	0	0	0	0	0	0
31.2	cell.division	2 (0.72%)	1	0	1	0	0	0	0	0
31.3	cell.cycle	2 (0.72%)	0	0	0	1	0	1	0	0
34.99	transport.misc	2 (0.72%)	0	0	0	0	1	0	1	0
3	minor CHO metabolism	1 (0.36%)	0	0	0	0	0	1	0	0
10.1	cell wall.precursor synthesis	1 (0.36%)	0	0	0	0	0	0	0	1
10.1.4	cell wall.precursor synthesis.UGD	1 (0.36%)	0	0	0	0	0	0	0	1
3.5	minor CHO metabolism.others	1 (0.36%)	0	0	0	0	0	1	0	0
10.2	cell wall.cellulose synthesis	1 (0.36%)	0	0	0	0	0	1	0	0
10.5	cell wall.cell wall proteins	1 (0.36%)	0	0	0	0	0	0	1	0
10.5.5	cell wall.cell wall proteins.RGP	1 (0.36%)	0	0	0	0	0	0	1	0
10.6.2	cell wall.degradation.mannan-xylose-arabinose-fucose	1 (0.36%)	0	0	0	0	1	0	0	0
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	1 (0.36%)	0	0	0	0	0	0	1	0
16.1	secondary metabolism.isoprenoids	1 (0.36%)	0	1	0	0	0	0	0	0
16.1.1	secondary metabolism.isoprenoids.non-mevalonate pathway	1 (0.36%)	0	1	0	0	0	0	0	0
16.1.1.2	secondary metabolism.isoprenoids.non-mevalonate pathway.DXR	1 (0.36%)	0	1	0	0	0	0	0	0
17.2.2	hormone metabolism.auxin.signal transduction	1 (0.36%)	1	0	0	0	0	0	0	0
17.4.1	hormone metabolism.cytokinin.synthesis-degradation	1 (0.36%)	0	0	0	1	0	0	0	0
17.4.2	hormone metabolism.cytokinin.signal transduction	1 (0.36%)	0	0	0	0	0	1	0	0
17.5	hormone metabolism.ethylene	1 (0.36%)	0	0	1	0	0	0	0	0
17.5.1	hormone metabolism.ethylene.synthesis-degradation	1 (0.36%)	0	0	1	0	0	0	0	0
20.1	stress.biotic	1 (0.36%)	0	0	1	0	0	0	0	0
20.2.3	stress.abiotic.drought/salt	1 (0.36%)	1	0	0	0	0	0	0	0
23	nucleotide metabolism	1 (0.36%)	0	0	0	0	0	1	0	0
23.3	nucleotide metabolism.salvage	1 (0.36%)	0	0	0	0	0	1	0	0
23.3.1	nucleotide metabolism.salvage.phosphoribosyltransferases	1 (0.36%)	0	0	0	0	0	1	0	0
23.3.1.1	nucleotide metabolism.salvage.phosphoribosyltransferases.aprt	1 (0.36%)	0	0	0	0	0	1	0	0
26.12	misc.peroxidases	1 (0.36%)	0	0	1	0	0	0	0	0
26.13	misc.acid and other phosphatases	1 (0.36%)	1	0	0	0	0	0	0	0
26.28	misc.GDSL-motif lipase	1 (0.36%)	0	0	0	0	1	0	0	0
26.8	misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases	1 (0.36%)	0	0	0	0	1	0	0	0
27.3.1	RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family	1 (0.36%)	0	0	1	0	0	0	0	0
27.3.26	RNA.regulation of transcription.MYB-related transcription factor family	1 (0.36%)	0	0	0	1	0	0	0	0
27.3.27	RNA.regulation of transcription.NAC domain transcription factor family	1 (0.36%)	1	0	0	0	0	0	0	0
27.3.28	RNA.regulation of transcription.SBP,Squamosa promoter binding protein family	1 (0.36%)	0	0	0	0	0	0	1	0
27.3.29	RNA.regulation of transcription.TCP transcription factor family	1 (0.36%)	0	0	0	0	1	0	0	0
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	1 (0.36%)	0	0	0	0	0	1	0	0
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	1 (0.36%)	0	0	0	1	0	0	0	0
27.3.40	RNA.regulation of transcription.Aux/IAA family	1 (0.36%)	0	0	0	0	0	0	1	0
27.3.47	RNA.regulation of transcription.ELF3	1 (0.36%)	0	0	0	0	1	0	0	0
27.3.50	RNA.regulation of transcription.General Transcription	1 (0.36%)	0	0	0	0	1	0	0	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	1 (0.36%)	0	0	0	0	0	0	0	1
27.3.69	RNA.regulation of transcription.SET-domain transcriptional regulator family	1 (0.36%)	0	0	0	1	0	0	0	0
27.3.7	RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family	1 (0.36%)	0	0	0	0	1	0	0	0
27.3.8	RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family	1 (0.36%)	0	0	0	0	0	0	0	1
27.3.9	RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family	1 (0.36%)	0	0	1	0	0	0	0	0
28.2	DNA.repair	1 (0.36%)	0	0	0	1	0	0	0	0
29.2	protein.synthesis	1 (0.36%)	1	0	0	0	0	0	0	0
29.2.1.2.1.15	protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S15	1 (0.36%)	1	0	0	0	0	0	0	0
29.2.2	protein.synthesis.ribosome biogenesis	1 (0.36%)	1	0	0	0	0	0	0	0
29.3.1	protein.targeting.nucleus	1 (0.36%)	1	0	0	0	0	0	0	0
29.3.4	protein.targeting.secretory pathway	1 (0.36%)	1	0	0	0	0	0	0	0
29.3.4.3	protein.targeting.secretory pathway.vacuole	1 (0.36%)	1	0	0	0	0	0	0	0
29.5.1	protein.degradation.subtilases	1 (0.36%)	1	0	0	0	0	0	0	0
29.5.11.4.4	protein.degradation.ubiquitin.E3.APC	1 (0.36%)	0	0	0	0	0	0	0	1
29.5.11.4.5.2	protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ	1 (0.36%)	0	0	0	0	1	0	0	0
29.5.9	protein.degradation.AAA type	1 (0.36%)	0	0	0	0	0	0	1	0
29.7	protein.glycosylation	1 (0.36%)	0	0	0	0	1	0	0	0
30.3	signalling.calcium	1 (0.36%)	0	0	0	0	1	0	0	0
30.5	signalling.G-proteins	1 (0.36%)	0	0	0	0	0	1	0	0
31.3.1	cell.cycle.peptidylprolyl isomerase	1 (0.36%)	0	0	0	1	0	0	0	0
31.4	cell.vesicle transport	1 (0.36%)	0	0	0	0	0	0	0	1
34.15	transport.potassium	1 (0.36%)	0	0	0	0	1	0	0	0
34.16	transport.ABC transporters and multidrug resistance systems	1 (0.36%)	0	0	1	0	0	0	0	0
34.7	transport.phosphate	1 (0.36%)	1	0	0	0	0	0	0	0