MapMan terms associated with a binding site

Binding site
Motif_143
Name
VND6
Description
Arabidopsis VASCULAR-RELATED NAC-DOMAIN6 directly regulates the genes that govern programmed cell death and secondary wall formation during xylem differentiation
#Associated genes
358
#Associated MapMan terms
118

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MapMan Description #Associated genes ath bra cme egr gma ptr ppe sly stu vvi
27RNA61 (17.04%)470118912406
27.3RNA.regulation of transcription56 (15.64%)460118910305
29protein22 (6.15%)2201562103
27.3.37RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family21 (5.87%)3501641100
26misc19 (5.31%)3104225101
29.5protein.degradation17 (4.75%)2100262103
17hormone metabolism13 (3.63%)2201322100
30signalling13 (3.63%)1003232002
27.3.11RNA.regulation of transcription.C2H2 zinc finger family10 (2.79%)0000512101
31cell10 (2.79%)1100122102
31.1cell.organisation10 (2.79%)1100122102
10cell wall9 (2.51%)1001203101
17.2hormone metabolism.auxin9 (2.51%)1101221100
17.2.3hormone metabolism.auxin.induced-regulated-responsive-activated9 (2.51%)1101221100
29.5.11.4.2protein.degradation.ubiquitin.E3.RING9 (2.51%)0002402001
30.2signalling.receptor kinases9 (2.51%)1002221001
33development9 (2.51%)0102301002
11lipid metabolism8 (2.23%)0102002201
33.99development.unspecified8 (2.23%)0101301002
29.5.3protein.degradation.cysteine protease7 (1.96%)1100021101
34transport7 (1.96%)0000123001
11.9lipid metabolism.lipid degradation6 (1.68%)0102000201
11.9.2lipid metabolism.lipid degradation.lipases6 (1.68%)0102000201
27.3.99RNA.regulation of transcription.unclassified6 (1.68%)0000221001
30.2.11signalling.receptor kinases.leucine rich repeat XI6 (1.68%)0001221000
10.6cell wall.degradation5 (1.40%)1001101100
11.9.2.1lipid metabolism.lipid degradation.lipases.triacylglycerol lipase5 (1.40%)0102000101
26.2misc.UDP glucosyl and glucoronyl transferases5 (1.40%)1001011001
28DNA5 (1.40%)0100012001
28.1DNA.synthesis/chromatin structure5 (1.40%)0100012001
1PS4 (1.12%)0000100003
1.1PS.lightreaction4 (1.12%)0000100003
16secondary metabolism4 (1.12%)0100020001
26.12misc.peroxidases4 (1.12%)0001200100
26.24misc.GCN5-related N-acetyltransferase4 (1.12%)1101001000
27.1RNA.processing4 (1.12%)0100002001
1.1.1PS.lightreaction.photosystem II3 (0.84%)0000000003
1.1.1.1PS.lightreaction.photosystem II.LHC-II3 (0.84%)0000000003
10.6.2cell wall.degradation.mannan-xylose-arabinose-fucose3 (0.84%)0001100100
10.7cell wall.modification3 (0.84%)0000101001
16.10secondary metabolism.simple phenols3 (0.84%)0100010001
20stress3 (0.84%)0001200000
27.3.67RNA.regulation of transcription.putative transcription regulator3 (0.84%)0000201000
29.4protein.postranslational modification3 (0.84%)0100200000
29.5.5protein.degradation.serine protease3 (0.84%)0000110001
34.16transport.ABC transporters and multidrug resistance systems3 (0.84%)0000021000
17.4hormone metabolism.cytokinin2 (0.56%)0000101000
17.4.1hormone metabolism.cytokinin.synthesis-degradation2 (0.56%)0000101000
19tetrapyrrole synthesis2 (0.56%)0000020000
20.2stress.abiotic2 (0.56%)0000200000
20.2.99stress.abiotic.unspecified2 (0.56%)0000200000
26.7misc.oxidases - copper, flavone etc2 (0.56%)1000010000
27.1.1RNA.processing.splicing2 (0.56%)0000001001
27.1.2RNA.processing.RNA helicase2 (0.56%)0100001000
27.3.10RNA.regulation of transcription.C2C2(Zn) YABBY family2 (0.56%)0000001001
27.3.66RNA.regulation of transcription.Psudo ARR transcription factor family2 (0.56%)0000200000
29.5.1protein.degradation.subtilases2 (0.56%)0000010001
29.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX2 (0.56%)0000002000
30.2.3signalling.receptor kinases.leucine rich repeat III2 (0.56%)0000010001
30.3signalling.calcium2 (0.56%)0000001001
1.1.40PS.lightreaction.cyclic electron flow-chlororespiration1 (0.28%)0000100000
10.5cell wall.cell wall proteins1 (0.28%)0000001000
10.5.5cell wall.cell wall proteins.RGP1 (0.28%)0000001000
10.6.1cell wall.degradation.cellulases and beta -1,4-glucanases1 (0.28%)0000001000
10.6.3cell wall.degradation.pectate lyases and polygalacturonases1 (0.28%)1000000000
11.1lipid metabolism.FA synthesis and FA elongation1 (0.28%)0000001000
11.1.10lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase1 (0.28%)0000001000
11.8lipid metabolism.exotics(steroids, squalene etc)1 (0.28%)0000001000
11.8.3lipid metabolism.exotics (steroids, squalene etc).UDP-glucose:sterol glucosyltransferase1 (0.28%)0000001000
11.9.2.2lipid metabolism.lipid degradation.lipases.acylglycerol lipase1 (0.28%)0000000100
16.2secondary metabolism.phenylpropanoids1 (0.28%)0000010000
17.1hormone metabolism.abscisic acid1 (0.28%)1000000000
17.1.3hormone metabolism.abscisic acid.induced-regulated-responsive-activated1 (0.28%)1000000000
17.8hormone metabolism.salicylic acid1 (0.28%)0100000000
17.8.1hormone metabolism.salicylic acid.synthesis-degradation1 (0.28%)0100000000
18Co-factor and vitamine metabolism1 (0.28%)0000000001
18.7Co-factor and vitamine metabolism.iron-sulphur clusters1 (0.28%)0000000001
19.12tetrapyrrole synthesis.magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase1 (0.28%)0000010000
19.4tetrapyrrole synthesis.ALA dehydratase1 (0.28%)0000010000
20.1stress.biotic1 (0.28%)0001000000
20.1.7stress.biotic.PR-proteins1 (0.28%)0001000000
23nucleotide metabolism1 (0.28%)1000000000
23.1nucleotide metabolism.synthesis1 (0.28%)1000000000
23.1.2nucleotide metabolism.synthesis.purine1 (0.28%)1000000000
23.1.2.7nucleotide metabolism.synthesis.purine.SAICAR synthetase1 (0.28%)1000000000
26.10misc.cytochrome P4501 (0.28%)0001000000
26.13misc.acid and other phosphatases1 (0.28%)0000001000
26.28misc.GDSL-motif lipase1 (0.28%)0000001000
26.3misc.gluco-, galacto- and mannosidases1 (0.28%)0000001000
26.3.4misc.gluco-, galacto- and mannosidases.endoglucanase1 (0.28%)0000001000
27.2RNA.transcription1 (0.28%)0000000100
27.3.12RNA.regulation of transcription.C3H zinc finger family1 (0.28%)0000001000
27.3.21RNA.regulation of transcription.GRAS transcription factor family1 (0.28%)0000010000
27.3.22RNA.regulation of transcription.HB,Homeobox transcription factor family1 (0.28%)0000100000
27.3.23RNA.regulation of transcription.HSF,Heat-shock transcription factor family1 (0.28%)1000000000
27.3.25RNA.regulation of transcription.MYB domain transcription factor family1 (0.28%)0000000001
27.3.26RNA.regulation of transcription.MYB-related transcription factor family1 (0.28%)0000001000
27.3.32RNA.regulation of transcription.WRKY domain transcription factor family1 (0.28%)0100000000
27.3.35RNA.regulation of transcription.bZIP transcription factor family1 (0.28%)0000001000
27.3.6RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family1 (0.28%)0000000100
27.3.60RNA.regulation of transcription.NIN-like bZIP-related family1 (0.28%)0000001000
27.3.8RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family1 (0.28%)0000010000
27.3.80RNA.regulation of transcription.zf-HD1 (0.28%)0000000001
28.1.3DNA.synthesis/chromatin structure.histone1 (0.28%)0000001000
29.1protein.aa activation1 (0.28%)0000100000
29.4.1protein.postranslational modification.kinase1 (0.28%)0100000000
29.4.1.57protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII1 (0.28%)0100000000
29.5.11protein.degradation.ubiquitin1 (0.28%)0000010000
29.6protein.folding1 (0.28%)0001000000
30.10signalling.phosphorelay1 (0.28%)0001000000
30.11signalling.light1 (0.28%)0000010000
30.2.17signalling.receptor kinases.DUF 261 (0.28%)0001000000
30.2.5signalling.receptor kinases.leucine rich repeat V1 (0.28%)1000000000
33.3development.squamosa promoter binding like (SPL)1 (0.28%)0001000000
34.12transport.metal1 (0.28%)0000001000
34.2transport.sugars1 (0.28%)0000100000
34.8transport.metabolite transporters at the envelope membrane1 (0.28%)0000000001
34.9transport.metabolite transporters at the mitochondrial membrane1 (0.28%)0000001000