InterPro domains associated with a binding site

Binding site
Motif_143
Name
VND6
Description
Arabidopsis VASCULAR-RELATED NAC-DOMAIN6 directly regulates the genes that govern programmed cell death and secondary wall formation during xylem differentiation
#Associated genes
358
#Associated InterPro terms
279

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InterPro Description #Associated genes ath bra cme egr gma ptr ppe sly stu vvi
IPR004883Lateral organ boundaries, LOB25 (6.98%)3501641140
IPR007087Zinc finger, C2H217 (4.75%)0010523222
IPR001611Leucine-rich repeat12 (3.35%)1102221021
IPR027417P-loop containing nucleoside triphosphate hydrolase12 (3.35%)0200153001
IPR011989Armadillo-like helical11 (3.07%)0101402111
IPR016024Armadillo-type fold11 (3.07%)0101402111
IPR013210Leucine-rich repeat-containing N-terminal, type 211 (3.07%)1101221021
IPR000719Protein kinase domain11 (3.07%)1112320001
IPR011009Protein kinase-like domain11 (3.07%)1112320001
IPR015880Zinc finger, C2H2-like11 (3.07%)0010501121
IPR004877Cytochrome b561, eukaryote10 (2.79%)1101221110
IPR006593Cytochrome b561/ferric reductase transmembrane10 (2.79%)1101221110
IPR005018DOMON domain10 (2.79%)1101221110
IPR017214Uncharacterised conserved protein UCP03747110 (2.79%)1101221110
IPR000169Cysteine peptidase, cysteine active site9 (2.51%)1100021121
IPR003591Leucine-rich repeat, typical subtype9 (2.51%)0102220020
IPR013128Peptidase C1A, papain9 (2.51%)1100021121
IPR000668Peptidase C1A, papain C-terminal9 (2.51%)1100021121
IPR013201Proteinase inhibitor I29, cathepsin propeptide9 (2.51%)1100021121
IPR001841Zinc finger, RING-type9 (2.51%)0002402001
IPR013083Zinc finger, RING/FYVE/PHD-type9 (2.51%)0002402001
IPR002921Lipase, class 38 (2.23%)0111000131
IPR002290Serine/threonine- / dual specificity protein kinase, catalytic domain8 (2.23%)0012310001
IPR008271Serine/threonine-protein kinase, active site8 (2.23%)0012310001
IPR025661Cysteine peptidase, asparagine active site7 (1.96%)0000021121
IPR025660Cysteine peptidase, histidine active site7 (1.96%)1100021011
IPR017441Protein kinase, ATP binding site7 (1.96%)1111210000
IPR009606Protein of unknown function DUF12187 (1.96%)0110220001
IPR010341Protein of unknown function DUF936, plant7 (1.96%)1110211000
IPR017907Zinc finger, RING-type, conserved site7 (1.96%)0002401000
IPR013320Concanavalin A-like lectin/glucanase, subgroup6 (1.68%)0011101011
IPR002713FF domain6 (1.68%)0010311000
IPR003406Glycosyl transferase, family 146 (1.68%)1011011001
IPR011600Peptidase C14, caspase domain6 (1.68%)1010111010
IPR001202WW domain6 (1.68%)0010311000
IPR013087Zinc finger C2H2-type/integrase DNA-binding domain6 (1.68%)0010211001
IPR003593AAA+ ATPase domain5 (1.40%)0000032000
IPR009057Homeodomain-like5 (1.40%)0000201002
IPR006734Protein of unknown function DUF5975 (1.40%)0000221000
IPR007033Transcriptional activator, plants5 (1.40%)0010021001
IPR016181Acyl-CoA N-acyltransferase4 (1.12%)1101001000
IPR023213Chloramphenicol acetyltransferase-like domain4 (1.12%)1010010010
IPR008985Concanavalin A-like lectin/glucanases superfamily4 (1.12%)0000101011
IPR008972Cupredoxin4 (1.12%)0110010001
IPR000182GNAT domain4 (1.12%)1101001000
IPR013781Glycoside hydrolase, catalytic domain4 (1.12%)0001100110
IPR001547Glycoside hydrolase, family 54 (1.12%)0001100110
IPR017853Glycoside hydrolase, superfamily4 (1.12%)0001100110
IPR010255Haem peroxidase4 (1.12%)0001200100
IPR002016Haem peroxidase, plant/fungal/bacterial4 (1.12%)0001200100
IPR001650Helicase, C-terminal4 (1.12%)0200001001
IPR014001Helicase, superfamily 1/2, ATP-binding domain4 (1.12%)0200001001
IPR011707Multicopper oxidase, type 34 (1.12%)0110010001
IPR012940Nucleic acid binding NABP4 (1.12%)0000400000
IPR012677Nucleotide-binding, alpha-beta plait4 (1.12%)0010001002
IPR019793Peroxidases heam-ligand binding site4 (1.12%)0001200100
IPR000823Plant peroxidase4 (1.12%)0001200100
IPR001313Pumilio RNA-binding repeat4 (1.12%)0000400000
IPR011260RNA polymerase, alpha subunit, C-terminal4 (1.12%)0000000130
IPR000504RNA recognition motif domain4 (1.12%)0010001002
IPR003480Transferase4 (1.12%)1010010010
IPR017871ABC transporter, conserved site3 (0.84%)0000021000
IPR003439ABC transporter-like3 (0.84%)0000021000
IPR000225Armadillo3 (0.84%)0001000110
IPR022796Chlorophyll A-B binding protein3 (0.84%)0000000003
IPR001344Chlorophyll A-B binding protein, plant3 (0.84%)0000000003
IPR023329Chlorophyll a/b binding protein domain3 (0.84%)0000000003
IPR011709Domain of unknown function DUF16053 (0.84%)0100001001
IPR005175Domain of unknown function DUF2963 (0.84%)0000201000
IPR000757Glycoside hydrolase, family 163 (0.84%)0000101001
IPR021133HEAT, type 23 (0.84%)0100001001
IPR007502Helicase-associated domain3 (0.84%)0100001001
IPR017761Laccase3 (0.84%)0110010000
IPR025875Leucine rich repeat 43 (0.84%)0000001020
IPR016196Major facilitator superfamily domain, general substrate transporter3 (0.84%)0100100001
IPR002355Multicopper oxidase, copper-binding site3 (0.84%)0110010000
IPR001117Multicopper oxidase, type 13 (0.84%)0110010000
IPR011706Multicopper oxidase, type 23 (0.84%)0110010000
IPR003441NAC domain3 (0.84%)0000200001
IPR001563Peptidase S10, serine carboxypeptidase3 (0.84%)0000110001
IPR018202Peptidase S10, serine carboxypeptidase, active site3 (0.84%)0000110001
IPR027237Pre-mRNA-processing protein PRP403 (0.84%)0010011000
IPR022023U1 small nuclear ribonucleoprotein of 70kDa N-terminal3 (0.84%)0010001001
IPR010713Xyloglucan endo-transglycosylase, C-terminal3 (0.84%)0000101001
IPR011527ABC transporter type 1, transmembrane domain2 (0.56%)0000011000
IPR001140ABC transporter, transmembrane domain2 (0.56%)0000011000
IPR000073Alpha/beta hydrolase fold-12 (0.56%)0000000110
IPR002110Ankyrin repeat2 (0.56%)0000002000
IPR020683Ankyrin repeat-containing domain2 (0.56%)0000002000
IPR013069BTB/POZ2 (0.56%)0000011000
IPR011333BTB/POZ fold2 (0.56%)0000011000
IPR000210BTB/POZ-like2 (0.56%)0000011000
IPR010402CCT domain2 (0.56%)0000200000
IPR024395CLASP N-terminal domain2 (0.56%)0100000001
IPR016169CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 22 (0.56%)0000101000
IPR011006CheY-like superfamily2 (0.56%)0000200000
IPR006045Cupin 12 (0.56%)0000200000
IPR005798Cytochrome b/b6, C-terminal2 (0.56%)0000000020
IPR015345Cytokinin dehydrogenase 1, FAD/cytokinin binding domain2 (0.56%)0000101000
IPR008921DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal2 (0.56%)0000011000
IPR022754DNA polymerase III, gamma subunit, domain III2 (0.56%)0000011000
IPR012763DNA polymerase III, subunit gamma/ tau2 (0.56%)0000011000
IPR011545DNA/RNA helicase, DEAD/DEAH box type, N-terminal2 (0.56%)0100000001
IPR006869Domain of unknown function DUF5472 (0.56%)0100010000
IPR006094FAD linked oxidase, N-terminal2 (0.56%)0000101000
IPR016166FAD-binding, type 22 (0.56%)0000101000
IPR016167FAD-binding, type 2, subdomain 12 (0.56%)0000101000
IPR016164FAD-linked oxidase-like, C-terminal2 (0.56%)0000101000
IPR001929Germin2 (0.56%)0000200000
IPR019780Germin, manganese binding site2 (0.56%)0000200000
IPR008263Glycoside hydrolase, family 16, active site2 (0.56%)0000100001
IPR000357HEAT2 (0.56%)0000001001
IPR009071High mobility group box domain2 (0.56%)0000001001
IPR001752Kinesin, motor domain2 (0.56%)0000020000
IPR019821Kinesin, motor region, conserved site2 (0.56%)0000020000
IPR027640Kinesin-like protein2 (0.56%)0000020000
IPR009768Microtubule-associated protein 702 (0.56%)0000000110
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain2 (0.56%)0000000110
IPR006093Oxygen oxidoreductase covalent FAD-binding site2 (0.56%)0000101000
IPR023828Peptidase S8, subtilisin, Ser-active site2 (0.56%)0000010001
IPR015500Peptidase S8, subtilisin-related2 (0.56%)0000010001
IPR000209Peptidase S8/S53 domain2 (0.56%)0000010001
IPR003137Protease-associated domain, PA2 (0.56%)0000010001
IPR010259Proteinase inhibitor I92 (0.56%)0000010001
IPR011051RmlC-like cupin domain2 (0.56%)0000200000
IPR014710RmlC-like jelly roll fold2 (0.56%)0000200000
IPR017884SANT domain2 (0.56%)0000101000
IPR001005SANT/Myb domain2 (0.56%)0000001001
IPR001245Serine-threonine/tyrosine-protein kinase catalytic domain2 (0.56%)0010010000
IPR001789Signal transduction response regulator, receiver domain2 (0.56%)0000200000
IPR012341Six-hairpin glycosidase2 (0.56%)0000002000
IPR008928Six-hairpin glycosidase-like2 (0.56%)0000002000
IPR025749Sphingomyelin synthase-like domain2 (0.56%)0010000001
IPR025757Ternary complex factor MIP1, leucine-zipper2 (0.56%)0100010000
IPR011990Tetratricopeptide-like helical2 (0.56%)0000001001
IPR005349Uncharacterised protein family UPF0136, Transmembrane2 (0.56%)1000000010
IPR016170Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain2 (0.56%)0000101000
IPR011991Winged helix-turn-helix DNA-binding domain2 (0.56%)1000001000
IPR006780YABBY protein2 (0.56%)0000001001
IPR018957Zinc finger, C3HC4 RING-type2 (0.56%)0002000000
IPR002867Zinc finger, C6HC-type2 (0.56%)0002000000
IPR000571Zinc finger, CCCH-type2 (0.56%)0000001001
IPR0137473-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal1 (0.28%)0000001000
IPR0068285-AMP-activated protein kinase, beta subunit, interaction domain1 (0.28%)0000100000
IPR013525ABC-2 type transporter1 (0.28%)0000010000
IPR017904ADF/Cofilin/Destrin1 (0.28%)0000000001
IPR004667ADP/ATP carrier protein1 (0.28%)0000000001
IPR013816ATP-grasp fold, subdomain 21 (0.28%)1000000000
IPR002108Actin-binding, cofilin/tropomyosin type1 (0.28%)0000000001
IPR013785Aldolase-type TIM barrel1 (0.28%)0000010000
IPR007934Alpha-L-arabinofuranosidase B1 (0.28%)0000001000
IPR002937Amine oxidase1 (0.28%)0000010000
IPR001412Aminoacyl-tRNA synthetase, class I, conserved site1 (0.28%)0000100000
IPR002305Aminoacyl-tRNA synthetase, class Ic1 (0.28%)0000100000
IPR004827Basic-leucine zipper domain1 (0.28%)0000001000
IPR006595CTLH, C-terminal LisH motif1 (0.28%)0000100000
IPR019028Carbohydrate binding domain CBM491 (0.28%)0000001000
IPR001128Cytochrome P4501 (0.28%)0001000000
IPR002401Cytochrome P450, E-class, group I1 (0.28%)0001000000
IPR017972Cytochrome P450, conserved site1 (0.28%)0001000000
IPR016175Cytochrome b/b61 (0.28%)0000000010
IPR005870Cytochrome b6/f complex, subunit IV1 (0.28%)0000000010
IPR003657DNA-binding WRKY1 (0.28%)0100000000
IPR009025DNA-directed RNA polymerase, RBP11-like dimerisation domain1 (0.28%)0000000010
IPR011263DNA-directed RNA polymerase, RpoA/D/Rpb3-type1 (0.28%)0000000010
IPR011773DNA-directed RNA polymerase, alpha subunit1 (0.28%)0000000010
IPR011262DNA-directed RNA polymerase, insert domain1 (0.28%)0000000010
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site1 (0.28%)0000001000
IPR001623DnaJ domain1 (0.28%)0000000001
IPR009769Domain of unknown function DUF13361 (0.28%)1000000000
IPR025064Domain of unknown function DUF40051 (0.28%)0000000001
IPR025314Domain of unknown function DUF42191 (0.28%)0010000000
IPR025398Domain of unknown function DUF43711 (0.28%)0000001000
IPR025486Domain of unknown function DUF43781 (0.28%)0010000000
IPR007751Domain of unknown function DUF676, lipase-like1 (0.28%)0010000000
IPR017187Ethylene-insensitive protein 21 (0.28%)0000001000
IPR017451F-box associated interaction domain1 (0.28%)0000001000
IPR001810F-box domain1 (0.28%)0000001000
IPR013601FAE1/Type III polyketide synthase-like protein1 (0.28%)0000001000
IPR009078Ferritin-like superfamily1 (0.28%)0000010000
IPR004182GRAM domain1 (0.28%)1000000000
IPR005828General substrate transporter1 (0.28%)0000100000
IPR000743Glycoside hydrolase, family 281 (0.28%)1000000000
IPR001701Glycoside hydrolase, family 91 (0.28%)0000001000
IPR018221Glycoside hydrolase, family 9, active site1 (0.28%)0000001000
IPR004276Glycosyl transferase, family 281 (0.28%)0000001000
IPR000740GrpE nucleotide exchange factor1 (0.28%)0001000000
IPR013805GrpE nucleotide exchange factor, coiled-coil1 (0.28%)0001000000
IPR009012GrpE nucleotide exchange factor, head1 (0.28%)0001000000
IPR008906HAT dimerisation domain, C-terminal1 (0.28%)0000001000
IPR000232Heat shock factor (HSF)-type, DNA-binding1 (0.28%)1000000000
IPR027725Heat shock transcription factor family1 (0.28%)1000000000
IPR027709Heat shock transcription factor, plant1 (0.28%)1000000000
IPR005819Histone H51 (0.28%)0000001000
IPR008422Homeobox KN domain1 (0.28%)0000100000
IPR001356Homeobox domain1 (0.28%)0000100000
IPR006455Homeodomain, ZF-HD class1 (0.28%)0000000001
IPR000048IQ motif, EF-hand binding site1 (0.28%)0000000001
IPR014756Immunoglobulin E-set1 (0.28%)0000100000
IPR027443Isopenicillin N synthase-like1 (0.28%)1000000000
IPR005540KNOX11 (0.28%)0000000010
IPR005541KNOX21 (0.28%)0000000010
IPR001220Legume lectin domain1 (0.28%)0000000010
IPR019825Legume lectin, beta chain, Mn/Ca-binding site1 (0.28%)0000000010
IPR005818Linker histone H1/H5, domain H151 (0.28%)0000001000
IPR001087Lipase, GDSL1 (0.28%)0000001000
IPR006594LisH dimerisation motif1 (0.28%)0000100000
IPR019498MENTAL domain1 (0.28%)1000000000
IPR008434Magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase1 (0.28%)0000010000
IPR020846Major facilitator superfamily domain1 (0.28%)0000100000
IPR007145Microtubule-associated protein, MAP65/Ase1/PRC11 (0.28%)1000000000
IPR023395Mitochondrial carrier domain1 (0.28%)0000001000
IPR002067Mitochondrial carrier protein1 (0.28%)0000001000
IPR018108Mitochondrial substrate/solute carrier1 (0.28%)0000001000
IPR017930Myb domain1 (0.28%)0000000001
IPR001609Myosin head, motor domain1 (0.28%)0000100000
IPR016040NAD(P)-binding domain1 (0.28%)0000000001
IPR002871NIF system FeS cluster assembly, NifU, N-terminal1 (0.28%)0000000001
IPR027356NPH3 domain1 (0.28%)0000010000
IPR001046Natural resistance-associated macrophage like1 (0.28%)0000001000
IPR010658Nodulin-like1 (0.28%)0100000000
IPR026992Non-haem dioxygenase N-terminal domain1 (0.28%)1000000000
IPR025605OST-HTH/LOTUS domain1 (0.28%)0000000001
IPR005123Oxoglutarate/iron-dependent dioxygenase1 (0.28%)1000000000
IPR026961PGG domain1 (0.28%)0000001000
IPR006563POX domain1 (0.28%)0000100000
IPR006626Parallel beta-helix repeat1 (0.28%)1000000000
IPR012334Pectin lyase fold1 (0.28%)1000000000
IPR011050Pectin lyase fold/virulence factor1 (0.28%)1000000000
IPR002885Pentatricopeptide repeat1 (0.28%)0000000001
IPR021102Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A1 (0.28%)1000000000
IPR019794Peroxidase, active site1 (0.28%)0000000100
IPR001636Phosphoribosylaminoimidazole-succinocarboxamide synthase1 (0.28%)1000000000
IPR000270Phox/Bem1p1 (0.28%)0000001000
IPR001731Porphobilinogen synthase1 (0.28%)0000010000
IPR008511Protein BYPASS-related1 (0.28%)0000100000
IPR012878Protein of unknown function DUF16801 (0.28%)0000001000
IPR012881Protein of unknown function DUF16851 (0.28%)0000001000
IPR019363Protein of unknown function DUF23051 (0.28%)0000000001
IPR021788Protein of unknown function DUF33531 (0.28%)0000000001
IPR022212Protein of unknown function DUF37411 (0.28%)0010000000
IPR007650Protein of unknown function DUF5811 (0.28%)0001000000
IPR011047Quinonprotein alcohol dehydrogenase-like superfamily1 (0.28%)0000100000
IPR014014RNA helicase, DEAD-box type, Q motif1 (0.28%)0100000000
IPR003035RWP-RK domain1 (0.28%)0000001000
IPR026960Reverse transcriptase zinc-binding domain1 (0.28%)0000001000
IPR004901Reversibly glycosylated polypeptide family1 (0.28%)0000001000
IPR012337Ribonuclease H-like domain1 (0.28%)0000001000
IPR014729Rossmann-like alpha/beta/alpha sandwich fold1 (0.28%)0000100000
IPR003251Rubrerythrin1 (0.28%)0000010000
IPR018236SAICAR synthetase, conserved site1 (0.28%)1000000000
IPR005299SAM dependent carboxyl methyltransferase1 (0.28%)0100000000
IPR013831SGNH hydrolase-type esterase domain1 (0.28%)0000001000
IPR007587SIT4 phosphatase-associated protein family1 (0.28%)0000001000
IPR008207Signal transduction histidine kinase, phosphotransfer (Hpt) domain1 (0.28%)0001000000
IPR001045Spermidine/spermine synthases family1 (0.28%)0010000000
IPR005829Sugar transporter, conserved site1 (0.28%)0000100000
IPR003663Sugar/inositol transporter1 (0.28%)0000100000
IPR027329TPX2, C-terminal domain1 (0.28%)0000001000
IPR001440Tetratricopeptide TPR11 (0.28%)0000001000
IPR019734Tetratricopeptide repeat1 (0.28%)0000001000
IPR013026Tetratricopeptide repeat-containing domain1 (0.28%)0000001000
IPR016039Thiolase-like1 (0.28%)0000001000
IPR016038Thiolase-like, subgroup1 (0.28%)0000001000
IPR027728Topless family1 (0.28%)0000100000
IPR005202Transcription factor GRAS1 (0.28%)0000010000
IPR004333Transcription factor, SBP-box1 (0.28%)0001000000
IPR024738Transcriptional coactivator Hfi1/Transcriptional adapter 11 (0.28%)0000010000
IPR002306Tryptophan-tRNA ligase1 (0.28%)0000100000
IPR024109Tryptophan-tRNA ligase, bacterial-type1 (0.28%)0000100000
IPR002213UDP-glucuronosyl/UDP-glucosyltransferase1 (0.28%)0000001000
IPR001680WD40 repeat1 (0.28%)0000100000
IPR019775WD40 repeat, conserved site1 (0.28%)0000100000
IPR017986WD40-repeat-containing domain1 (0.28%)0000100000
IPR015943WD40/YVTN repeat-like-containing domain1 (0.28%)0000100000
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain1 (0.28%)0000000001
IPR000315Zinc finger, B-box1 (0.28%)0000100000
IPR003851Zinc finger, Dof-type1 (0.28%)0000010000
IPR006580Zinc finger, TTF-type1 (0.28%)0000001000