PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Motif_138
Name: RAP2.2
Description: Transcription factor RAP2.2 and its interacting partner SINAT2: stable elements in the carotenogenesis of Arabidopsis leaves

#Associated genes: 175
#Associated MapMan terms: 104

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	24 (13.71%)	0	1	0	9	5	6	1	2
27.3	RNA.regulation of transcription	20 (11.43%)	0	1	0	6	4	6	1	2
29	protein	15 (8.57%)	2	2	0	2	1	4	2	2
1	PS	12 (6.86%)	2	0	0	0	4	2	2	2
1.1	PS.lightreaction	10 (5.71%)	2	0	0	0	4	1	2	1
31	cell	9 (5.14%)	1	0	0	1	2	2	2	1
30	signalling	8 (4.57%)	1	1	0	2	0	3	0	1
20	stress	6 (3.43%)	1	0	0	0	3	0	1	1
29.4	protein.postranslational modification	6 (3.43%)	1	1	0	0	1	2	0	1
27.3.8	RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family	5 (2.86%)	0	0	0	1	2	2	0	0
27.3.99	RNA.regulation of transcription.unclassified	5 (2.86%)	0	0	0	2	1	2	0	0
29.5	protein.degradation	5 (2.86%)	1	0	0	0	0	2	1	1
1.1.1	PS.lightreaction.photosystem II	4 (2.29%)	1	0	0	0	1	0	2	0
10	cell wall	4 (2.29%)	0	0	0	3	0	0	1	0
20.2	stress.abiotic	4 (2.29%)	0	0	0	0	3	0	0	1
21	redox	4 (2.29%)	0	1	0	0	0	1	0	2
26	misc	4 (2.29%)	0	1	2	1	0	0	0	0
28	DNA	4 (2.29%)	0	0	0	0	0	2	1	1
29.4.1	protein.postranslational modification.kinase	4 (2.29%)	1	1	0	0	1	1	0	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	4 (2.29%)	0	0	0	4	0	0	0	0
30.2	signalling.receptor kinases	4 (2.29%)	1	1	0	1	0	1	0	0
31.3	cell.cycle	4 (2.29%)	1	0	0	0	0	2	1	0
1.1.3	PS.lightreaction.cytochrome b6/f	3 (1.71%)	0	0	0	0	2	0	0	1
1.1.3.4	PS.lightreaction.cytochrome b6/f.apocytochrome f (CYF)	3 (1.71%)	0	0	0	0	2	0	0	1
10.8	cell wall.pectin*esterases	3 (1.71%)	0	0	0	3	0	0	0	0
10.8.1	cell wall.pectin*esterases.PME	3 (1.71%)	0	0	0	3	0	0	0	0
21.1	redox.thioredoxin	3 (1.71%)	0	1	0	0	0	1	0	1
27.4	RNA.RNA binding	3 (1.71%)	0	0	0	2	1	0	0	0
31.1	cell.organisation	3 (1.71%)	0	0	0	0	2	0	1	0
1.1.1.1	PS.lightreaction.photosystem II.LHC-II	2 (1.14%)	1	0	0	0	0	0	1	0
1.1.1.2	PS.lightreaction.photosystem II.PSII polypeptide subunits	2 (1.14%)	0	0	0	0	1	0	1	0
1.1.5	PS.lightreaction.other electron carrier (ox/red)	2 (1.14%)	0	0	0	0	1	1	0	0
1.3	PS.calvin cycle	2 (1.14%)	0	0	0	0	0	1	0	1
1.3.13	PS.calvin cycle.rubisco interacting	2 (1.14%)	0	0	0	0	0	1	0	1
17	hormone metabolism	2 (1.14%)	1	0	0	0	0	0	1	0
20.1	stress.biotic	2 (1.14%)	1	0	0	0	0	0	1	0
21.1.1	redox.thioredoxin.PDIL	2 (1.14%)	0	1	0	0	0	1	0	0
27.3.37	RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family	2 (1.14%)	0	0	0	2	0	0	0	0
28.1	DNA.synthesis/chromatin structure	2 (1.14%)	0	0	0	0	0	1	0	1
28.99	DNA.unspecified	2 (1.14%)	0	0	0	0	0	1	1	0
29.2	protein.synthesis	2 (1.14%)	0	0	0	2	0	0	0	0
29.2.3	protein.synthesis.initiation	2 (1.14%)	0	0	0	2	0	0	0	0
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	2 (1.14%)	0	0	0	0	1	1	0	0
29.5.11	protein.degradation.ubiquitin	2 (1.14%)	1	0	0	0	0	1	0	0
30.2.3	signalling.receptor kinases.leucine rich repeat III	2 (1.14%)	0	1	0	0	0	1	0	0
30.5	signalling.G-proteins	2 (1.14%)	0	0	0	0	0	2	0	0
34	transport	2 (1.14%)	1	0	0	0	1	0	0	0
1.1.2	PS.lightreaction.photosystem I	1 (0.57%)	1	0	0	0	0	0	0	0
1.1.2.1	PS.lightreaction.photosystem I.LHC-I	1 (0.57%)	1	0	0	0	0	0	0	0
1.1.5.2	PS.lightreaction.other electron carrier (ox/red).ferredoxin	1 (0.57%)	0	0	0	0	0	1	0	0
1.1.5.4	PS.lightreaction.other electron carrier (ox/red).ferredoxin oxireductase	1 (0.57%)	0	0	0	0	1	0	0	0
3	minor CHO metabolism	1 (0.57%)	0	0	0	0	0	0	0	1
10.5	cell wall.cell wall proteins	1 (0.57%)	0	0	0	0	0	0	1	0
10.5.4	cell wall.cell wall proteins.HRGP	1 (0.57%)	0	0	0	0	0	0	1	0
11	lipid metabolism	1 (0.57%)	1	0	0	0	0	0	0	0
11.9	lipid metabolism.lipid degradation	1 (0.57%)	1	0	0	0	0	0	0	0
11.9.2	lipid metabolism.lipid degradation.lipases	1 (0.57%)	1	0	0	0	0	0	0	0
11.9.2.1	lipid metabolism.lipid degradation.lipases.triacylglycerol lipase	1 (0.57%)	1	0	0	0	0	0	0	0
13	amino acid metabolism	1 (0.57%)	0	0	0	0	1	0	0	0
13.1	amino acid metabolism.synthesis	1 (0.57%)	0	0	0	0	1	0	0	0
13.1.6	amino acid metabolism.synthesis.aromatic aa	1 (0.57%)	0	0	0	0	1	0	0	0
13.1.6.2	amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine	1 (0.57%)	0	0	0	0	1	0	0	0
17.4	hormone metabolism.cytokinin	1 (0.57%)	0	0	0	0	0	0	1	0
17.4.1	hormone metabolism.cytokinin.synthesis-degradation	1 (0.57%)	0	0	0	0	0	0	1	0
17.6	hormone metabolism.gibberelin	1 (0.57%)	1	0	0	0	0	0	0	0
17.6.2	hormone metabolism.gibberelin.signal transduction	1 (0.57%)	1	0	0	0	0	0	0	0
20.2.1	stress.abiotic.heat	1 (0.57%)	0	0	0	0	1	0	0	0
20.2.3	stress.abiotic.drought/salt	1 (0.57%)	0	0	0	0	0	0	0	1
20.2.99	stress.abiotic.unspecified	1 (0.57%)	0	0	0	0	1	0	0	0
3.6	minor CHO metabolism.callose	1 (0.57%)	0	0	0	0	0	0	0	1
21.2	redox.ascorbate and glutathione	1 (0.57%)	0	0	0	0	0	0	0	1
21.2.1	redox.ascorbate and glutathione.ascorbate	1 (0.57%)	0	0	0	0	0	0	0	1
26.10	misc.cytochrome P450	1 (0.57%)	0	0	1	0	0	0	0	0
26.12	misc.peroxidases	1 (0.57%)	0	0	1	0	0	0	0	0
26.17	misc.dynamin	1 (0.57%)	0	1	0	0	0	0	0	0
26.2	misc.UDP glucosyl and glucoronyl transferases	1 (0.57%)	0	0	0	1	0	0	0	0
27.1	RNA.processing	1 (0.57%)	0	0	0	1	0	0	0	0
27.1.1	RNA.processing.splicing	1 (0.57%)	0	0	0	1	0	0	0	0
27.3.15	RNA.regulation of transcription.CCAAT box binding factor family, HAP3	1 (0.57%)	0	0	0	0	0	0	0	1
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	1 (0.57%)	0	0	0	0	0	1	0	0
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	1 (0.57%)	0	0	0	0	0	0	1	0
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	1 (0.57%)	0	0	0	0	0	1	0	0
27.3.30	RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family	1 (0.57%)	0	0	0	0	1	0	0	0
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	1 (0.57%)	0	0	0	0	0	0	0	1
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	1 (0.57%)	0	0	0	1	0	0	0	0
27.3.62	RNA.regulation of transcription.Nucleosome/chromatin assembly factor group	1 (0.57%)	0	1	0	0	0	0	0	0
29.3	protein.targeting	1 (0.57%)	0	1	0	0	0	0	0	0
29.3.4	protein.targeting.secretory pathway	1 (0.57%)	0	1	0	0	0	0	0	0
29.3.4.99	protein.targeting.secretory pathway.unspecified	1 (0.57%)	0	1	0	0	0	0	0	0
29.5.11.20	protein.degradation.ubiquitin.proteasom	1 (0.57%)	1	0	0	0	0	0	0	0
29.5.11.3	protein.degradation.ubiquitin.E2	1 (0.57%)	0	0	0	0	0	1	0	0
29.6	protein.folding	1 (0.57%)	0	0	0	0	0	0	1	0
30.11	signalling.light	1 (0.57%)	0	0	0	1	0	0	0	0
30.2.17	signalling.receptor kinases.DUF 26	1 (0.57%)	0	0	0	1	0	0	0	0
30.2.22	signalling.receptor kinases.proline extensin like	1 (0.57%)	1	0	0	0	0	0	0	0
30.3	signalling.calcium	1 (0.57%)	0	0	0	0	0	0	0	1
31.2	cell.division	1 (0.57%)	0	0	0	1	0	0	0	0
31.3.1	cell.cycle.peptidylprolyl isomerase	1 (0.57%)	0	0	0	0	0	1	0	0
31.4	cell.vesicle transport	1 (0.57%)	0	0	0	0	0	0	0	1
33	development	1 (0.57%)	0	0	0	0	1	0	0	0
33.99	development.unspecified	1 (0.57%)	0	0	0	0	1	0	0	0
34.14	transport.unspecified cations	1 (0.57%)	0	0	0	0	1	0	0	0
34.19	transport.Major Intrinsic Proteins	1 (0.57%)	1	0	0	0	0	0	0	0
34.19.3	transport.Major Intrinsic Proteins.NIP	1 (0.57%)	1	0	0	0	0	0	0	0