InterPro domains associated with a binding site

Binding site
Motif_13
Name
E2F-varient binding site motif
Description
A genome-wide identification of E2F-regulated genes in Arabidopsis
#Associated genes
203
#Associated InterPro terms
228

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InterPro Description #Associated genes ath bra cme egr gma ptr ppe sly stu vvi
IPR027417P-loop containing nucleoside triphosphate hydrolase30 (14.78%)2121465333
IPR011989Armadillo-like helical11 (5.42%)1111112003
IPR016024Armadillo-type fold11 (5.42%)1111112003
IPR001650Helicase, C-terminal11 (5.42%)0101122112
IPR014001Helicase, superfamily 1/2, ATP-binding domain11 (5.42%)0101122112
IPR011545DNA/RNA helicase, DEAD/DEAH box type, N-terminal10 (4.93%)0001122112
IPR001810F-box domain9 (4.43%)1200221001
IPR027443Isopenicillin N synthase-like9 (4.43%)0104102001
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain9 (4.43%)0000221112
IPR001680WD40 repeat9 (4.43%)1100022003
IPR017986WD40-repeat-containing domain9 (4.43%)1100022003
IPR015943WD40/YVTN repeat-like-containing domain9 (4.43%)1100022003
IPR017853Glycoside hydrolase, superfamily8 (3.94%)0007001000
IPR006818Histone chaperone, ASF1-like8 (3.94%)1011220001
IPR012340Nucleic acid-binding, OB-fold8 (3.94%)0000021221
IPR005172CRC domain7 (3.45%)0002401000
IPR000322Glycoside hydrolase, family 317 (3.45%)0007000000
IPR013721STAG7 (3.45%)1011111001
IPR011990Tetratricopeptide-like helical7 (3.45%)1111020001
IPR003593AAA+ ATPase domain6 (2.96%)0000121110
IPR012961DSH, C-terminal6 (2.96%)0001101111
IPR011013Galactose mutarotase-like domain6 (2.96%)0006000000
IPR009057Homeodomain-like6 (2.96%)0001210011
IPR001208Mini-chromosome maintenance, DNA-dependent ATPase6 (2.96%)0000011220
IPR020839Stromalin conservative domain6 (2.96%)1011101001
IPR024097Basic helix-loop-helix leucine zipper transcription factor5 (2.46%)0000120110
IPR024102Basic helix-loop-helix leucine zipper transcription factor, plant5 (2.46%)0000120110
IPR027925MCM N-terminal domain5 (2.46%)0000011111
IPR017930Myb domain5 (2.46%)0001210001
IPR003395RecF/RecN/SMC, N-terminal5 (2.46%)0010201001
IPR001005SANT/Myb domain5 (2.46%)0001210001
IPR010935SMCs flexible hinge5 (2.46%)0010201001
IPR013083Zinc finger, RING/FYVE/PHD-type5 (2.46%)0010012001
IPR013785Aldolase-type TIM barrel4 (1.97%)0004000000
IPR006918COBRA, plant4 (1.97%)0011200000
IPR002755DNA primase, small subunit4 (1.97%)0001000111
IPR014052DNA primase, small subunit, eukaryotic/archaeal4 (1.97%)0001000111
IPR020472G-protein beta WD-40 repeat4 (1.97%)0000021001
IPR009072Histone-fold4 (1.97%)0112000000
IPR013940Meiosis specific protein SPO224 (1.97%)1110000001
IPR002885Pentatricopeptide repeat4 (1.97%)0000211000
IPR019734Tetratricopeptide repeat4 (1.97%)1101000001
IPR019775WD40 repeat, conserved site4 (1.97%)1100001001
IPR001357BRCT domain3 (1.48%)0100010010
IPR000462CDP-alcohol phosphatidyltransferase3 (1.48%)0001020000
IPR007125Histone core3 (1.48%)0012000000
IPR011701Major facilitator superfamily3 (1.48%)1000020000
IPR020846Major facilitator superfamily domain3 (1.48%)1000020000
IPR016196Major facilitator superfamily domain, general substrate transporter3 (1.48%)1000020000
IPR018525Mini-chromosome maintenance, conserved site3 (1.48%)0000010110
IPR000719Protein kinase domain3 (1.48%)0010110000
IPR011009Protein kinase-like domain3 (1.48%)0010110000
IPR004179Sec63 domain3 (1.48%)0000011001
IPR013026Tetratricopeptide repeat-containing domain3 (1.48%)1001000001
IPR017871ABC transporter, conserved site2 (0.99%)0000020000
IPR003439ABC transporter-like2 (0.99%)0000020000
IPR016035Acyl transferase/acyl hydrolase/lysophospholipase2 (0.99%)0000001001
IPR001395Aldo/keto reductase2 (0.99%)1000000100
IPR020471Aldo/keto reductase subgroup2 (0.99%)1000000100
IPR018170Aldo/keto reductase, conserved site2 (0.99%)1000000100
IPR020578Aminotransferase class-V pyridoxal-phosphate binding site2 (0.99%)0000020000
IPR000192Aminotransferase, class V/Cysteine desulfurase2 (0.99%)0000020000
IPR024990Anaphase-promoting complex subunit 12 (0.99%)0000001001
IPR000225Armadillo2 (0.99%)0000001001
IPR015163CDC6, C-terminal domain2 (0.99%)2000000000
IPR018467CO/COL/TOC1, conserved site2 (0.99%)0100010000
IPR018501DDT domain superfamily2 (0.99%)0000011000
IPR018500DDT domain, subgroup2 (0.99%)0000011000
IPR008045DNA replication licensing factor Mcm22 (0.99%)0000000110
IPR001623DnaJ domain2 (0.99%)0011000000
IPR018253DnaJ domain, conserved site2 (0.99%)0011000000
IPR025718Histone deacetylase complex subunit SAP30, Sin3 binding domain2 (0.99%)0000200000
IPR024145Histone deacetylase complex subunit SAP30/SAP30-like2 (0.99%)0000200000
IPR011685LETM1-like2 (0.99%)0000001001
IPR006553Leucine-rich repeat, cysteine-containing subtype2 (0.99%)1100000000
IPR003591Leucine-rich repeat, typical subtype2 (0.99%)0000001001
IPR014772Mammalian uncoordinated homology 13, domain 22 (0.99%)0000010001
IPR023395Mitochondrial carrier domain2 (0.99%)0000200000
IPR018108Mitochondrial substrate/solute carrier2 (0.99%)0000200000
IPR014770Munc13 homology 12 (0.99%)0000010001
IPR023210NADP-dependent oxidoreductase domain2 (0.99%)1000000100
IPR012677Nucleotide-binding, alpha-beta plait2 (0.99%)0001010000
IPR002641Patatin/Phospholipase A2-related2 (0.99%)0000001001
IPR017441Protein kinase, ATP binding site2 (0.99%)0010100000
IPR008528Protein of unknown function DUF8102 (0.99%)0000010001
IPR015424Pyridoxal phosphate-dependent transferase2 (0.99%)0000020000
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 12 (0.99%)0000020000
IPR015422Pyridoxal phosphate-dependent transferase, major region, subdomain 22 (0.99%)0000020000
IPR000504RNA recognition motif domain2 (0.99%)0001010000
IPR001857Ribosomal protein L192 (0.99%)1000010000
IPR001245Serine-threonine/tyrosine-protein kinase catalytic domain2 (0.99%)0000110000
IPR002290Serine/threonine- / dual specificity protein kinase, catalytic domain2 (0.99%)0010100000
IPR001440Tetratricopeptide TPR12 (0.99%)1100000000
IPR010399Tify2 (0.99%)0100010000
IPR008991Translation protein SH3-like domain2 (0.99%)1000010000
IPR000626Ubiquitin domain2 (0.99%)0001000100
IPR011991Winged helix-turn-helix DNA-binding domain2 (0.99%)2000000000
IPR011011Zinc finger, FYVE/PHD-type2 (0.99%)0010010000
IPR001965Zinc finger, PHD-type2 (0.99%)0010010000
IPR001841Zinc finger, RING-type2 (0.99%)0000001001
IPR018866Zinc-finger domain of monoamine-oxidase A repressor R12 (0.99%)0000011000
IPR005801ADC synthase1 (0.49%)0010000000
IPR016192APOBEC/CMP deaminase, zinc-binding1 (0.49%)0100000000
IPR017956AT hook, DNA-binding motif1 (0.49%)0000100000
IPR003960ATPase, AAA-type, conserved site1 (0.49%)0000100000
IPR003959ATPase, AAA-type, core1 (0.49%)0000100000
IPR018082AmbAllergen1 (0.49%)0000010000
IPR019999Anthranilate synthase component I - like1 (0.49%)0010000000
IPR006805Anthranilate synthase component I, N-terminal1 (0.49%)0010000000
IPR005256Anthranilate synthase component I, PabB-like1 (0.49%)0010000000
IPR024357Argonaut, glycine-rich domain1 (0.49%)0010000000
IPR003100Argonaute/Dicer protein, PAZ domain1 (0.49%)0010000000
IPR008540BZR1, transcriptional repressor1 (0.49%)0000001000
IPR020983Basic leucine-zipper, C-terminal1 (0.49%)0100000000
IPR004827Basic-leucine zipper domain1 (0.49%)0100000000
IPR000644CBS domain1 (0.49%)0000010000
IPR024395CLASP N-terminal domain1 (0.49%)0000000001
IPR002125CMP/dCMP deaminase, zinc-binding1 (0.49%)0100000000
IPR001757Cation-transporting P-type ATPase1 (0.49%)0000010000
IPR027256Cation-transporting P-type ATPase, subfamily IB1 (0.49%)0000010000
IPR005150Cellulose synthase1 (0.49%)0000001000
IPR027934Cellulose synthase, RING-type zinc finger1 (0.49%)0000001000
IPR015890Chorismate binding, C-terminal1 (0.49%)0010000000
IPR016193Cytidine deaminase-like1 (0.49%)0100000000
IPR000432DNA mismatch repair protein MutS, C-terminal1 (0.49%)0000010000
IPR007861DNA mismatch repair protein MutS, clamp1 (0.49%)0000010000
IPR007860DNA mismatch repair protein MutS, connector domain1 (0.49%)0000010000
IPR007696DNA mismatch repair protein MutS, core1 (0.49%)0000010000
IPR007695DNA mismatch repair protein MutS-like, N-terminal1 (0.49%)0000010000
IPR024072Dihydrofolate reductase-like domain1 (0.49%)0100000000
IPR014811Domain of unknown function DUF17851 (0.49%)0010000000
IPR006887Domain of unknown function DUF6251 (0.49%)0100000000
IPR008546Domain of unknown function DUF8281 (0.49%)0001000000
IPR024943Enhancer of polycomb protein1 (0.49%)0000001000
IPR019542Enhancer of polycomb-like, N-terminal1 (0.49%)0000001000
IPR000692Fibrillarin1 (0.49%)0000000001
IPR020813Fibrillarin, conserved site1 (0.49%)0000000001
IPR013781Glycoside hydrolase, catalytic domain1 (0.49%)0000001000
IPR001554Glycoside hydrolase, family 141 (0.49%)0000001000
IPR018238Glycoside hydrolase, family 14, conserved site1 (0.49%)0000001000
IPR001371Glycoside hydrolase, family 14B, plant1 (0.49%)0000001000
IPR005027Glycosyl transferase, family 431 (0.49%)0001000000
IPR023214HAD-like domain1 (0.49%)0000010000
IPR000357HEAT1 (0.49%)0000000001
IPR021133HEAT, type 21 (0.49%)0000000001
IPR010255Haem peroxidase1 (0.49%)0000000001
IPR002016Haem peroxidase, plant/fungal/bacterial1 (0.49%)0000000001
IPR006636Heat shock chaperonin-binding1 (0.49%)0001000000
IPR006121Heavy metal-associated domain, HMA1 (0.49%)0000010000
IPR006122Heavy metal-associated domain, copper ion-binding1 (0.49%)0000010000
IPR017969Heavy-metal-associated, conserved site1 (0.49%)0000010000
IPR002119Histone H2A1 (0.49%)0010000000
IPR000164Histone H31 (0.49%)0001000000
IPR001951Histone H41 (0.49%)0001000000
IPR019809Histone H4, conserved site1 (0.49%)0001000000
IPR001356Homeobox domain1 (0.49%)0000000010
IPR024644Interferon-induced protein 44 family1 (0.49%)0000001000
IPR001752Kinesin, motor domain1 (0.49%)0010000000
IPR019821Kinesin, motor region, conserved site1 (0.49%)0010000000
IPR027640Kinesin-like protein1 (0.49%)0010000000
IPR008047Mini-chromosome maintenance complex protein 41 (0.49%)0000010000
IPR017877Myb-like domain1 (0.49%)0001000000
IPR026992Non-haem dioxygenase N-terminal domain1 (0.49%)0000100000
IPR011513Non-structural maintenance of chromosomes element 11 (0.49%)0000001000
IPR002075Nuclear transport factor 21 (0.49%)0001000000
IPR018222Nuclear transport factor 2, eukaryote1 (0.49%)0001000000
IPR008721Origin recognition complex, subunit 61 (0.49%)0000001000
IPR008250P-type ATPase, A domain1 (0.49%)0000010000
IPR023299P-type ATPase, cytoplasmic domain N1 (0.49%)0000010000
IPR018303P-type ATPase, phosphorylation site1 (0.49%)0000010000
IPR002022Pectate lyase/Amb allergen1 (0.49%)0000010000
IPR012334Pectin lyase fold1 (0.49%)0000010000
IPR011050Pectin lyase fold/virulence factor1 (0.49%)0000010000
IPR019794Peroxidase, active site1 (0.49%)0000000001
IPR019793Peroxidases heam-ligand binding site1 (0.49%)0000000001
IPR000270Phox/Bem1p1 (0.49%)0000100000
IPR000823Plant peroxidase1 (0.49%)0000000001
IPR011993Pleckstrin homology-like domain1 (0.49%)0100000000
IPR013666Pleckstrin-like, plant1 (0.49%)0001000000
IPR002015Proteasome/cyclosome repeat1 (0.49%)0000000001
IPR021881Protein of unknown function DUF34901 (0.49%)0010000000
IPR022100Protein of unknown function DUF36391 (0.49%)0000000001
IPR006460Protein of unknown function DUF617, plant1 (0.49%)1000000000
IPR016130Protein-tyrosine phosphatase, active site1 (0.49%)0001000000
IPR003595Protein-tyrosine phosphatase, catalytic1 (0.49%)0001000000
IPR000242Protein-tyrosine phosphatase, receptor/non-receptor type1 (0.49%)0001000000
IPR000387Protein-tyrosine/Dual specificity phosphatase1 (0.49%)0001000000
IPR007201RNA recognition motif 21 (0.49%)0000010000
IPR003107RNA-processing protein, HAT helix1 (0.49%)0001000000
IPR022617Rad60/SUMO-like domain1 (0.49%)0000000100
IPR004794Riboflavin biosynthesis protein RibD1 (0.49%)0100000000
IPR012337Ribonuclease H-like domain1 (0.49%)0010000000
IPR000592Ribosomal protein S27e1 (0.49%)0000100000
IPR023407Ribosomal protein S27e, zinc-binding domain1 (0.49%)0000100000
IPR004039Rubredoxin-type fold1 (0.49%)0000010000
IPR028288SCAR/WAVE family1 (0.49%)0001000000
IPR000330SNF2-related1 (0.49%)0100000000
IPR002913START domain1 (0.49%)0000000010
IPR023393START-like domain1 (0.49%)0000000010
IPR008271Serine/threonine-protein kinase, active site1 (0.49%)0000100000
IPR005225Small GTP-binding protein domain1 (0.49%)0000001000
IPR001806Small GTPase superfamily1 (0.49%)0000001000
IPR003579Small GTPase superfamily, Rab type1 (0.49%)0000001000
IPR020849Small GTPase superfamily, Ras type1 (0.49%)0000001000
IPR003578Small GTPase superfamily, Rho type1 (0.49%)0000001000
IPR003165Stem cell self-renewal protein Piwi1 (0.49%)0010000000
IPR027120Structural maintenance of chromosomes Smc21 (0.49%)0000000001
IPR006571TLDc1 (0.49%)0000001000
IPR005016TMS membrane protein/tumour differentially expressed protein1 (0.49%)0000100000
IPR011564Telomeric single stranded DNA binding POT1/Cdc131 (0.49%)0000010000
IPR013105Tetratricopeptide TPR21 (0.49%)0000000001
IPR012336Thioredoxin-like fold1 (0.49%)0001000000
IPR003958Transcription factor CBF/NF-Y/archaeal histone1 (0.49%)0100000000
IPR003957Transcription factor, NFYB/HAP3 subunit1 (0.49%)0100000000
IPR003956Transcription factor, NFYB/HAP3, conserved site1 (0.49%)0100000000
IPR009060UBA-like1 (0.49%)0001000000
IPR004806UV excision repair protein Rad231 (0.49%)0001000000
IPR000449Ubiquitin-associated domain/translation elongation factor EF-Ts, N-terminal1 (0.49%)0001000000
IPR015940Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote1 (0.49%)0001000000
IPR015415Vps4 oligomerisation, C-terminal1 (0.49%)0000100000
IPR003124WH2 domain1 (0.49%)0001000000
IPR015360XPC-binding domain1 (0.49%)0001000000
IPR000571Zinc finger, CCCH-type1 (0.49%)0000010000
IPR003126Zinc finger, N-recognin1 (0.49%)0010000000
IPR013993Zinc finger, N-recognin, metazoa1 (0.49%)0010000000
IPR019787Zinc finger, PHD-finger1 (0.49%)0000010000
IPR014857Zinc finger, RING-like1 (0.49%)0000001000
IPR011332Zinc-binding ribosomal protein1 (0.49%)0000100000