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BLAST
WorkbenchInterPro domains associated with a binding site
- Binding site
- Motif_126
- Name
- 5256BOXLELAT5256
- Description
- 52/56 box; A sequence motif shared between the tomato LAT(Late Anther Tomato)52 and LAT56 promoters; Encompassing PB core motif (TGTGGTT), and is closely related to the box II sequence motif in the pea rbcS-3A gene promoter; Involved in modulating the activity of the LAT gene promoters in pollen; Dispensable for the developmental regulation of the LAT52 gene in pollen; 52/56 box may be a target for the binding of a member of the GT-1 transcription factor family
- #Associated genes
- 3
- #Associated InterPro terms
- 7
Click table-header(s) to enable sorting
| InterPro | Description | #Associated genes | ath | bra | cme | egr | gma | ptr | ppe | sly | stu | vvi |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| IPR011989 | Armadillo-like helical | 1 (33.33%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| IPR016024 | Armadillo-type fold | 1 (33.33%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| IPR000558 | Histone H2B | 1 (33.33%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| IPR007125 | Histone core | 1 (33.33%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| IPR009072 | Histone-fold | 1 (33.33%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| IPR003613 | U box domain | 1 (33.33%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | 1 (33.33%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |