MapMan terms associated with a binding site
- Binding site
- Motif_121
- Name
- WRKY43;WRKY38;WRKY26
- Description
- Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense;Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function
- #Associated genes
- 78
- #Associated MapMan terms
- 36
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MapMan | Description | #Associated genes | ath | bra | cme | egr | gma | ptr | ppe | sly | stu | vvi |
---|---|---|---|---|---|---|---|---|---|---|---|---|
16 | secondary metabolism | 8 (10.26%) | 0 | 0 | 0 | 5 | 0 | 0 | 1 | 0 | 0 | 2 |
16.10 | secondary metabolism.simple phenols | 7 (8.97%) | 0 | 0 | 0 | 5 | 0 | 0 | 1 | 0 | 0 | 1 |
27 | RNA | 7 (8.97%) | 0 | 0 | 0 | 0 | 2 | 4 | 0 | 0 | 0 | 1 |
27.3 | RNA.regulation of transcription | 6 (7.69%) | 0 | 0 | 0 | 0 | 2 | 3 | 0 | 0 | 0 | 1 |
30 | signalling | 4 (5.13%) | 0 | 0 | 0 | 2 | 0 | 0 | 1 | 1 | 0 | 0 |
28 | DNA | 3 (3.85%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 0 |
28.1 | DNA.synthesis/chromatin structure | 3 (3.85%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 0 |
28.1.3 | DNA.synthesis/chromatin structure.histone | 3 (3.85%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 0 |
30.2 | signalling.receptor kinases | 3 (3.85%) | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 0 |
17 | hormone metabolism | 2 (2.56%) | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 |
19 | tetrapyrrole synthesis | 2 (2.56%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 |
19.8 | tetrapyrrole synthesis.coproporphyrinogen III oxidase | 2 (2.56%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 |
26 | misc | 2 (2.56%) | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
26.2 | misc.UDP glucosyl and glucoronyl transferases | 2 (2.56%) | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
27.3.6 | RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family | 2 (2.56%) | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 |
29 | protein | 2 (2.56%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 |
30.2.11 | signalling.receptor kinases.leucine rich repeat XI | 2 (2.56%) | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
16.7 | secondary metabolism.wax | 1 (1.28%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
17.2 | hormone metabolism.auxin | 1 (1.28%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
17.2.3 | hormone metabolism.auxin.induced-regulated-responsive-activated | 1 (1.28%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
17.4 | hormone metabolism.cytokinin | 1 (1.28%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
17.4.1 | hormone metabolism.cytokinin.synthesis-degradation | 1 (1.28%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
27.1 | RNA.processing | 1 (1.28%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
27.1.1 | RNA.processing.splicing | 1 (1.28%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
27.3.10 | RNA.regulation of transcription.C2C2(Zn) YABBY family | 1 (1.28%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
27.3.11 | RNA.regulation of transcription.C2H2 zinc finger family | 1 (1.28%) | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
27.3.5 | RNA.regulation of transcription.ARR | 1 (1.28%) | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
27.3.99 | RNA.regulation of transcription.unclassified | 1 (1.28%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
29.1 | protein.aa activation | 1 (1.28%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
29.1.5 | protein.aa activation.isoleucine-tRNA ligase | 1 (1.28%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
29.4 | protein.postranslational modification | 1 (1.28%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
29.5.11.4.5.2 | protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ | 1 (1.28%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
30.1 | signalling.in sugar and nutrient physiology | 1 (1.28%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
30.2.17 | signalling.receptor kinases.DUF 26 | 1 (1.28%) | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
33 | development | 1 (1.28%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
33.1 | development.storage proteins | 1 (1.28%) | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |