PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Motif_121
Name: WRKY43;WRKY38;WRKY26
Description: Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense;Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function

#Associated genes: 78
#Associated MapMan terms: 36

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MapMan	Description	#Associated genes	bra	egr	gma	ptr	ppe	sly	vvi
16	secondary metabolism	8 (10.26%)	0	5	0	0	1	0	2
16.10	secondary metabolism.simple phenols	7 (8.97%)	0	5	0	0	1	0	1
27	RNA	7 (8.97%)	0	0	2	4	0	0	1
27.3	RNA.regulation of transcription	6 (7.69%)	0	0	2	3	0	0	1
30	signalling	4 (5.13%)	0	2	0	0	1	1	0
28	DNA	3 (3.85%)	0	0	0	0	1	2	0
28.1	DNA.synthesis/chromatin structure	3 (3.85%)	0	0	0	0	1	2	0
28.1.3	DNA.synthesis/chromatin structure.histone	3 (3.85%)	0	0	0	0	1	2	0
30.2	signalling.receptor kinases	3 (3.85%)	0	2	0	0	0	1	0
17	hormone metabolism	2 (2.56%)	0	0	1	0	1	0	0
19	tetrapyrrole synthesis	2 (2.56%)	0	0	0	0	1	0	1
19.8	tetrapyrrole synthesis.coproporphyrinogen III oxidase	2 (2.56%)	0	0	0	0	1	0	1
26	misc	2 (2.56%)	1	0	1	0	0	0	0
26.2	misc.UDP glucosyl and glucoronyl transferases	2 (2.56%)	1	0	1	0	0	0	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	2 (2.56%)	0	0	0	2	0	0	0
29	protein	2 (2.56%)	0	0	0	0	1	0	1
30.2.11	signalling.receptor kinases.leucine rich repeat XI	2 (2.56%)	0	1	0	0	0	1	0
16.7	secondary metabolism.wax	1 (1.28%)	0	0	0	0	0	0	1
17.2	hormone metabolism.auxin	1 (1.28%)	0	0	1	0	0	0	0
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	1 (1.28%)	0	0	1	0	0	0	0
17.4	hormone metabolism.cytokinin	1 (1.28%)	0	0	0	0	1	0	0
17.4.1	hormone metabolism.cytokinin.synthesis-degradation	1 (1.28%)	0	0	0	0	1	0	0
27.1	RNA.processing	1 (1.28%)	0	0	0	1	0	0	0
27.1.1	RNA.processing.splicing	1 (1.28%)	0	0	0	1	0	0	0
27.3.10	RNA.regulation of transcription.C2C2(Zn) YABBY family	1 (1.28%)	0	0	1	0	0	0	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	1 (1.28%)	0	0	0	1	0	0	0
27.3.5	RNA.regulation of transcription.ARR	1 (1.28%)	0	0	1	0	0	0	0
27.3.99	RNA.regulation of transcription.unclassified	1 (1.28%)	0	0	0	0	0	0	1
29.1	protein.aa activation	1 (1.28%)	0	0	0	0	1	0	0
29.1.5	protein.aa activation.isoleucine-tRNA ligase	1 (1.28%)	0	0	0	0	1	0	0
29.4	protein.postranslational modification	1 (1.28%)	0	0	0	0	0	0	1
29.5.11.4.5.2	protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ	1 (1.28%)	0	0	0	0	1	0	0
30.1	signalling.in sugar and nutrient physiology	1 (1.28%)	0	0	0	0	1	0	0
30.2.17	signalling.receptor kinases.DUF 26	1 (1.28%)	0	1	0	0	0	0	0
33	development	1 (1.28%)	0	0	0	0	1	0	0
33.1	development.storage proteins	1 (1.28%)	0	0	0	0	1	0	0