PLAZA 3.0 Dicots : Binding Sites

Gene Ontology terms associated with a binding site

Binding site: Motif_101
Name: MYB61
Description: AtMYB61, an R2R3-MYB transcription factor, functions as a pleiotropic regulator via a small gene network

#Associated genes: 17
#Associated GO terms: 251

Biological Process
Molecular Function
Cellular Component

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Cellular Component (back to top)

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GO	Description	#Associated genes	bra	egr	ptr	ppe	vvi
GO:0005623	cell	7 (41.18%)	1	1	2	1	2
GO:0044464	cell part	7 (41.18%)	1	1	2	1	2
GO:0005622	intracellular	7 (41.18%)	1	1	2	1	2
GO:0043231	intracellular membrane-bounded organelle	7 (41.18%)	1	1	2	1	2
GO:0043229	intracellular organelle	7 (41.18%)	1	1	2	1	2
GO:0044424	intracellular part	7 (41.18%)	1	1	2	1	2
GO:0043227	membrane-bounded organelle	7 (41.18%)	1	1	2	1	2
GO:0043226	organelle	7 (41.18%)	1	1	2	1	2
GO:0005737	cytoplasm	6 (35.29%)	1	1	1	1	2
GO:0044444	cytoplasmic part	6 (35.29%)	1	1	1	1	2
GO:0005773	vacuole	5 (29.41%)	1	1	1	1	1
GO:0016020	membrane	4 (23.53%)	0	2	1	0	1
GO:0005794	Golgi apparatus	3 (17.65%)	0	1	1	0	1
GO:0030054	cell junction	3 (17.65%)	0	1	1	0	1
GO:0071944	cell periphery	3 (17.65%)	0	1	1	0	1
GO:0005618	cell wall	3 (17.65%)	0	1	1	0	1
GO:0005911	cell-cell junction	3 (17.65%)	0	1	1	0	1
GO:0005783	endoplasmic reticulum	3 (17.65%)	0	1	1	0	1
GO:0030312	external encapsulating structure	3 (17.65%)	0	1	1	0	1
GO:0044446	intracellular organelle part	3 (17.65%)	0	1	1	0	1
GO:0031090	organelle membrane	3 (17.65%)	0	1	1	0	1
GO:0044422	organelle part	3 (17.65%)	0	1	1	0	1
GO:0009505	plant-type cell wall	3 (17.65%)	0	1	1	0	1
GO:0005886	plasma membrane	3 (17.65%)	0	1	1	0	1
GO:0009506	plasmodesma	3 (17.65%)	0	1	1	0	1
GO:0055044	symplast	3 (17.65%)	0	1	1	0	1
GO:0005774	vacuolar membrane	3 (17.65%)	0	1	1	0	1
GO:0044437	vacuolar part	3 (17.65%)	0	1	1	0	1
GO:0016021	integral to membrane	1 (5.88%)	0	1	0	0	0
GO:0031224	intrinsic to membrane	1 (5.88%)	0	1	0	0	0
GO:0044425	membrane part	1 (5.88%)	0	1	0	0	0
GO:0005634	nucleus	1 (5.88%)	0	0	1	0	0
GO:0009536	plastid	1 (5.88%)	0	0	0	0	1

Molecular Function (back to top)

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GO	Description	#Associated genes	egr	gma	ptr	vvi
GO:0005488	binding	8 (47.06%)	2	3	2	1
GO:0003824	catalytic activity	6 (35.29%)	1	1	2	2
GO:1901363	heterocyclic compound binding	6 (35.29%)	2	1	2	1
GO:0043167	ion binding	6 (35.29%)	1	3	1	1
GO:0097159	organic cyclic compound binding	6 (35.29%)	2	1	2	1
GO:0043169	cation binding	5 (29.41%)	1	2	1	1
GO:0046872	metal ion binding	5 (29.41%)	1	2	1	1
GO:0020037	heme binding	3 (17.65%)	1	0	1	1
GO:0042802	identical protein binding	3 (17.65%)	1	0	1	1
GO:0005506	iron ion binding	3 (17.65%)	1	0	1	1
GO:0004497	monooxygenase activity	3 (17.65%)	1	0	1	1
GO:0001071	nucleic acid binding transcription factor activity	3 (17.65%)	1	0	2	0
GO:0016491	oxidoreductase activity	3 (17.65%)	1	0	1	1
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3 (17.65%)	1	0	1	1
GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3 (17.65%)	1	0	1	1
GO:0005515	protein binding	3 (17.65%)	1	0	1	1
GO:0003700	sequence-specific DNA binding transcription factor activity	3 (17.65%)	1	0	2	0
GO:0046906	tetrapyrrole binding	3 (17.65%)	1	0	1	1
GO:0016710	trans-cinnamate 4-monooxygenase activity	3 (17.65%)	1	0	1	1
GO:0046914	transition metal ion binding	3 (17.65%)	1	0	1	1
GO:0003677	DNA binding	2 (11.76%)	1	0	1	0
GO:0003676	nucleic acid binding	2 (11.76%)	1	0	1	0
GO:0043565	sequence-specific DNA binding	2 (11.76%)	1	0	1	0
GO:0005524	ATP binding	1 (5.88%)	0	1	0	0
GO:0022804	active transmembrane transporter activity	1 (5.88%)	1	0	0	0
GO:0030554	adenyl nucleotide binding	1 (5.88%)	0	1	0	0
GO:0032559	adenyl ribonucleotide binding	1 (5.88%)	0	1	0	0
GO:0043168	anion binding	1 (5.88%)	0	1	0	0
GO:0015297	antiporter activity	1 (5.88%)	1	0	0	0
GO:0030246	carbohydrate binding	1 (5.88%)	0	1	0	0
GO:0097367	carbohydrate derivative binding	1 (5.88%)	0	1	0	0
GO:0008324	cation transmembrane transporter activity	1 (5.88%)	1	0	0	0
GO:0015491	cation:cation antiporter activity	1 (5.88%)	1	0	0	0
GO:0009055	electron carrier activity	1 (5.88%)	0	0	1	0
GO:0015078	hydrogen ion transmembrane transporter activity	1 (5.88%)	1	0	0	0
GO:0016787	hydrolase activity	1 (5.88%)	0	0	1	0
GO:0016788	hydrolase activity, acting on ester bonds	1 (5.88%)	0	0	1	0
GO:0022890	inorganic cation transmembrane transporter activity	1 (5.88%)	1	0	0	0
GO:0016866	intramolecular transferase activity	1 (5.88%)	0	0	0	1
GO:0016868	intramolecular transferase activity, phosphotransferases	1 (5.88%)	0	0	0	1
GO:0015075	ion transmembrane transporter activity	1 (5.88%)	1	0	0	0
GO:0016853	isomerase activity	1 (5.88%)	0	0	0	1
GO:0016301	kinase activity	1 (5.88%)	0	1	0	0
GO:0046873	metal ion transmembrane transporter activity	1 (5.88%)	1	0	0	0
GO:0005451	monovalent cation:hydrogen antiporter activity	1 (5.88%)	1	0	0	0
GO:0015077	monovalent inorganic cation transmembrane transporter activity	1 (5.88%)	1	0	0	0
GO:0001882	nucleoside binding	1 (5.88%)	0	1	0	0
GO:1901265	nucleoside phosphate binding	1 (5.88%)	0	1	0	0
GO:0000166	nucleotide binding	1 (5.88%)	0	1	0	0
GO:0004619	phosphoglycerate mutase activity	1 (5.88%)	0	0	0	1
GO:0016773	phosphotransferase activity, alcohol group as acceptor	1 (5.88%)	0	1	0	0
GO:0004672	protein kinase activity	1 (5.88%)	0	1	0	0
GO:0004674	protein serine/threonine kinase activity	1 (5.88%)	0	1	0	0
GO:0001883	purine nucleoside binding	1 (5.88%)	0	1	0	0
GO:0017076	purine nucleotide binding	1 (5.88%)	0	1	0	0
GO:0032550	purine ribonucleoside binding	1 (5.88%)	0	1	0	0
GO:0035639	purine ribonucleoside triphosphate binding	1 (5.88%)	0	1	0	0
GO:0032555	purine ribonucleotide binding	1 (5.88%)	0	1	0	0
GO:0032549	ribonucleoside binding	1 (5.88%)	0	1	0	0
GO:0032553	ribonucleotide binding	1 (5.88%)	0	1	0	0
GO:0015291	secondary active transmembrane transporter activity	1 (5.88%)	1	0	0	0
GO:0036094	small molecule binding	1 (5.88%)	0	1	0	0
GO:0015081	sodium ion transmembrane transporter activity	1 (5.88%)	1	0	0	0
GO:0015385	sodium:hydrogen antiporter activity	1 (5.88%)	1	0	0	0
GO:0015298	solute:cation antiporter activity	1 (5.88%)	1	0	0	0
GO:0015299	solute:hydrogen antiporter activity	1 (5.88%)	1	0	0	0
GO:0022891	substrate-specific transmembrane transporter activity	1 (5.88%)	1	0	0	0
GO:0022892	substrate-specific transporter activity	1 (5.88%)	1	0	0	0
GO:0016740	transferase activity	1 (5.88%)	0	1	0	0
GO:0016772	transferase activity, transferring phosphorus-containing groups	1 (5.88%)	0	1	0	0
GO:0022857	transmembrane transporter activity	1 (5.88%)	1	0	0	0
GO:0005215	transporter activity	1 (5.88%)	1	0	0	0

Biological Process (back to top)

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GO	Description	#Associated genes	egr	gma	ptr	vvi
GO:0044699	single-organism process	10 (58.82%)	2	3	3	2
GO:0009987	cellular process	9 (52.94%)	3	2	2	2
GO:0008152	metabolic process	9 (52.94%)	2	2	3	2
GO:0071704	organic substance metabolic process	9 (52.94%)	2	2	3	2
GO:0044237	cellular metabolic process	8 (47.06%)	2	2	2	2
GO:0044763	single-organism cellular process	7 (41.18%)	2	1	2	2
GO:0044238	primary metabolic process	6 (35.29%)	1	2	2	1
GO:0044710	single-organism metabolic process	6 (35.29%)	1	1	2	2
GO:0019438	aromatic compound biosynthetic process	5 (29.41%)	2	0	2	1
GO:0009058	biosynthetic process	5 (29.41%)	2	0	2	1
GO:0006725	cellular aromatic compound metabolic process	5 (29.41%)	2	0	2	1
GO:0044249	cellular biosynthetic process	5 (29.41%)	2	0	2	1
GO:1901362	organic cyclic compound biosynthetic process	5 (29.41%)	2	0	2	1
GO:1901360	organic cyclic compound metabolic process	5 (29.41%)	2	0	2	1
GO:1901576	organic substance biosynthetic process	5 (29.41%)	2	0	2	1
GO:0050896	response to stimulus	5 (29.41%)	1	0	2	2
GO:0048856	anatomical structure development	4 (23.53%)	1	0	2	1
GO:0032502	developmental process	4 (23.53%)	1	0	2	1
GO:0007275	multicellular organismal development	4 (23.53%)	1	0	2	1
GO:0032501	multicellular organismal process	4 (23.53%)	1	0	2	1
GO:0006950	response to stress	4 (23.53%)	1	0	2	1
GO:0044707	single-multicellular organism process	4 (23.53%)	1	0	2	1
GO:0044767	single-organism developmental process	4 (23.53%)	1	0	2	1
GO:0065007	biological regulation	3 (17.65%)	2	0	1	0
GO:0006812	cation transport	3 (17.65%)	1	2	0	0
GO:0044260	cellular macromolecule metabolic process	3 (17.65%)	1	1	1	0
GO:0051234	establishment of localization	3 (17.65%)	1	2	0	0
GO:0048229	gametophyte development	3 (17.65%)	1	0	1	1
GO:0040007	growth	3 (17.65%)	1	0	1	1
GO:0006811	ion transport	3 (17.65%)	1	2	0	0
GO:0009808	lignin metabolic process	3 (17.65%)	1	0	1	1
GO:0051179	localization	3 (17.65%)	1	2	0	0
GO:0043170	macromolecule metabolic process	3 (17.65%)	1	1	1	0
GO:0030001	metal ion transport	3 (17.65%)	1	2	0	0
GO:0055114	oxidation-reduction process	3 (17.65%)	1	0	1	1
GO:0009699	phenylpropanoid biosynthetic process	3 (17.65%)	1	0	1	1
GO:0009698	phenylpropanoid metabolic process	3 (17.65%)	1	0	1	1
GO:0009555	pollen development	3 (17.65%)	1	0	1	1
GO:0009628	response to abiotic stimulus	3 (17.65%)	1	0	1	1
GO:0080167	response to karrikin	3 (17.65%)	1	0	1	1
GO:0009416	response to light stimulus	3 (17.65%)	1	0	1	1
GO:0009314	response to radiation	3 (17.65%)	1	0	1	1
GO:0009611	response to wounding	3 (17.65%)	1	0	1	1
GO:0019748	secondary metabolic process	3 (17.65%)	1	0	1	1
GO:0044550	secondary metabolite biosynthetic process	3 (17.65%)	1	0	1	1
GO:0044711	single-organism biosynthetic process	3 (17.65%)	1	0	1	1
GO:0044765	single-organism transport	3 (17.65%)	1	2	0	0
GO:0006810	transport	3 (17.65%)	1	2	0	0
GO:0032774	RNA biosynthetic process	2 (11.76%)	1	0	1	0
GO:0016070	RNA metabolic process	2 (11.76%)	1	0	1	0
GO:0034645	cellular macromolecule biosynthetic process	2 (11.76%)	1	0	1	0
GO:0044271	cellular nitrogen compound biosynthetic process	2 (11.76%)	1	0	1	0
GO:0034641	cellular nitrogen compound metabolic process	2 (11.76%)	1	0	1	0
GO:0010467	gene expression	2 (11.76%)	1	0	1	0
GO:0018130	heterocycle biosynthetic process	2 (11.76%)	1	0	1	0
GO:0046483	heterocycle metabolic process	2 (11.76%)	1	0	1	0
GO:0006629	lipid metabolic process	2 (11.76%)	0	1	1	0
GO:0009059	macromolecule biosynthetic process	2 (11.76%)	1	0	1	0
GO:0006807	nitrogen compound metabolic process	2 (11.76%)	1	0	1	0
GO:0090304	nucleic acid metabolic process	2 (11.76%)	1	0	1	0
GO:0034654	nucleobase-containing compound biosynthetic process	2 (11.76%)	1	0	1	0
GO:0006139	nucleobase-containing compound metabolic process	2 (11.76%)	1	0	1	0
GO:0006796	phosphate-containing compound metabolic process	2 (11.76%)	0	2	0	0
GO:0006793	phosphorus metabolic process	2 (11.76%)	0	2	0	0
GO:2001141	regulation of RNA biosynthetic process	2 (11.76%)	1	0	1	0
GO:0051252	regulation of RNA metabolic process	2 (11.76%)	1	0	1	0
GO:0050789	regulation of biological process	2 (11.76%)	1	0	1	0
GO:0009889	regulation of biosynthetic process	2 (11.76%)	1	0	1	0
GO:0031326	regulation of cellular biosynthetic process	2 (11.76%)	1	0	1	0
GO:2000112	regulation of cellular macromolecule biosynthetic process	2 (11.76%)	1	0	1	0
GO:0031323	regulation of cellular metabolic process	2 (11.76%)	1	0	1	0
GO:0050794	regulation of cellular process	2 (11.76%)	1	0	1	0
GO:0010468	regulation of gene expression	2 (11.76%)	1	0	1	0
GO:0010556	regulation of macromolecule biosynthetic process	2 (11.76%)	1	0	1	0
GO:0060255	regulation of macromolecule metabolic process	2 (11.76%)	1	0	1	0
GO:0019222	regulation of metabolic process	2 (11.76%)	1	0	1	0
GO:0051171	regulation of nitrogen compound metabolic process	2 (11.76%)	1	0	1	0
GO:0019219	regulation of nucleobase-containing compound metabolic process	2 (11.76%)	1	0	1	0
GO:0080090	regulation of primary metabolic process	2 (11.76%)	1	0	1	0
GO:0006355	regulation of transcription, DNA-dependent	2 (11.76%)	1	0	1	0
GO:0006351	transcription, DNA-templated	2 (11.76%)	1	0	1	0
GO:0016052	carbohydrate catabolic process	1 (5.88%)	0	0	0	1
GO:0005975	carbohydrate metabolic process	1 (5.88%)	0	0	0	1
GO:0009056	catabolic process	1 (5.88%)	0	0	0	1
GO:0055080	cation homeostasis	1 (5.88%)	1	0	0	0
GO:0044255	cellular lipid metabolic process	1 (5.88%)	0	1	0	0
GO:0044267	cellular protein metabolic process	1 (5.88%)	0	1	0	0
GO:0006464	cellular protein modification process	1 (5.88%)	0	1	0	0
GO:0051716	cellular response to stimulus	1 (5.88%)	0	0	1	0
GO:0033554	cellular response to stress	1 (5.88%)	0	0	1	0
GO:0048878	chemical homeostasis	1 (5.88%)	1	0	0	0
GO:0016311	dephosphorylation	1 (5.88%)	0	1	0	0
GO:0006091	generation of precursor metabolites and energy	1 (5.88%)	0	0	0	1
GO:0006007	glucose catabolic process	1 (5.88%)	0	0	0	1
GO:0006006	glucose metabolic process	1 (5.88%)	0	0	0	1
GO:0046486	glycerolipid metabolic process	1 (5.88%)	0	1	0	0
GO:0006650	glycerophospholipid metabolic process	1 (5.88%)	0	1	0	0
GO:0006096	glycolysis	1 (5.88%)	0	0	0	1
GO:0019320	hexose catabolic process	1 (5.88%)	0	0	0	1
GO:0019318	hexose metabolic process	1 (5.88%)	0	0	0	1
GO:0042592	homeostatic process	1 (5.88%)	1	0	0	0
GO:0050801	ion homeostasis	1 (5.88%)	1	0	0	0
GO:0048527	lateral root development	1 (5.88%)	0	0	1	0
GO:0030258	lipid modification	1 (5.88%)	0	1	0	0
GO:0043412	macromolecule modification	1 (5.88%)	0	1	0	0
GO:0046365	monosaccharide catabolic process	1 (5.88%)	0	0	0	1
GO:0005996	monosaccharide metabolic process	1 (5.88%)	0	0	0	1
GO:0055067	monovalent inorganic cation homeostasis	1 (5.88%)	1	0	0	0
GO:0015672	monovalent inorganic cation transport	1 (5.88%)	1	0	0	0
GO:0048513	organ development	1 (5.88%)	0	0	1	0
GO:1901575	organic substance catabolic process	1 (5.88%)	0	0	0	1
GO:0019637	organophosphate metabolic process	1 (5.88%)	0	1	0	0
GO:0046856	phosphatidylinositol dephosphorylation	1 (5.88%)	0	1	0	0
GO:0046488	phosphatidylinositol metabolic process	1 (5.88%)	0	1	0	0
GO:0046839	phospholipid dephosphorylation	1 (5.88%)	0	1	0	0
GO:0006644	phospholipid metabolic process	1 (5.88%)	0	1	0	0
GO:0016310	phosphorylation	1 (5.88%)	0	1	0	0
GO:0009791	post-embryonic development	1 (5.88%)	0	0	1	0
GO:0048569	post-embryonic organ development	1 (5.88%)	0	0	1	0
GO:0048528	post-embryonic root development	1 (5.88%)	0	0	1	0
GO:0019538	protein metabolic process	1 (5.88%)	0	1	0	0
GO:0036211	protein modification process	1 (5.88%)	0	1	0	0
GO:0006468	protein phosphorylation	1 (5.88%)	0	1	0	0
GO:0043620	regulation of DNA-dependent transcription in response to stress	1 (5.88%)	0	0	1	0
GO:0065008	regulation of biological quality	1 (5.88%)	1	0	0	0
GO:0006885	regulation of pH	1 (5.88%)	1	0	0	0
GO:0032101	regulation of response to external stimulus	1 (5.88%)	0	0	1	0
GO:0032104	regulation of response to extracellular stimulus	1 (5.88%)	0	0	1	0
GO:0032107	regulation of response to nutrient levels	1 (5.88%)	0	0	1	0
GO:0048583	regulation of response to stimulus	1 (5.88%)	0	0	1	0
GO:0042221	response to chemical	1 (5.88%)	0	0	0	1
GO:0009605	response to external stimulus	1 (5.88%)	0	0	1	0
GO:0009991	response to extracellular stimulus	1 (5.88%)	0	0	1	0
GO:0010035	response to inorganic substance	1 (5.88%)	0	0	0	1
GO:0010167	response to nitrate	1 (5.88%)	0	0	0	1
GO:1901698	response to nitrogen compound	1 (5.88%)	0	0	0	1
GO:0031667	response to nutrient levels	1 (5.88%)	0	0	1	0
GO:1901700	response to oxygen-containing compound	1 (5.88%)	0	0	0	1
GO:0048364	root development	1 (5.88%)	0	0	1	0
GO:0022622	root system development	1 (5.88%)	0	0	1	0
GO:0044724	single-organism carbohydrate catabolic process	1 (5.88%)	0	0	0	1
GO:0044723	single-organism carbohydrate metabolic process	1 (5.88%)	0	0	0	1
GO:0044712	single-organism catabolic process	1 (5.88%)	0	0	0	1
GO:0006814	sodium ion transport	1 (5.88%)	1	0	0	0
GO:0048731	system development	1 (5.88%)	0	0	1	0
GO:0055085	transmembrane transport	1 (5.88%)	1	0	0	0