MapMan terms associated with a binding site

Binding site
Matrix_89
Name
SOC1
Description
Genome-wide identification of SOC1 and SVP targets during the floral transition in Arabidopsis
#Associated genes
791
#Associated MapMan terms
220

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MapMan Description #Associated genes ath bra cme egr gma ptr ppe sly stu vvi
27RNA141 (17.83%)141901133251212015
27.3RNA.regulation of transcription85 (10.75%)81305191767010
29protein59 (7.46%)780711145205
33development57 (7.21%)650511156504
20stress48 (6.07%)4709856504
33.99development.unspecified46 (5.82%)54039135403
30signalling42 (5.31%)24011983302
20.2stress.abiotic41 (5.18%)4509845402
29.4protein.postranslational modification31 (3.92%)4406832103
20.2.1stress.abiotic.heat26 (3.29%)3504432302
27.4RNA.RNA binding24 (3.03%)3302641302
34transport24 (3.03%)2103547200
27.1RNA.processing21 (2.65%)3102534102
30.2signalling.receptor kinases19 (2.40%)1009323100
2major CHO metabolism17 (2.15%)0102434003
26misc17 (2.15%)4401141002
27.3.66RNA.regulation of transcription.Psudo ARR transcription factor family15 (1.90%)1301331102
30.2.17signalling.receptor kinases.DUF 2615 (1.90%)0007223100
2.2major CHO metabolism.degradation14 (1.77%)0102224003
2.2.2major CHO metabolism.degradation.starch14 (1.77%)0102224003
11lipid metabolism13 (1.64%)0202241101
29.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX13 (1.64%)0202521100
30.3signalling.calcium13 (1.64%)0202250002
1PS11 (1.39%)0100332101
17hormone metabolism11 (1.39%)1101212003
21redox11 (1.39%)1101300203
27.2RNA.transcription11 (1.39%)0202311101
27.3.67RNA.regulation of transcription.putative transcription regulator11 (1.39%)3101040200
29.4.1protein.postranslational modification.kinase11 (1.39%)1004320001
33.30development.multitarget11 (1.39%)1102221101
33.30.1development.multitarget.target of rapamycin11 (1.39%)1102221101
3minor CHO metabolism10 (1.26%)1101222001
27.1.1RNA.processing.splicing10 (1.26%)2001231001
27.1.2RNA.processing.RNA helicase10 (1.26%)1101302101
27.3.7RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family10 (1.26%)1200231001
34.13transport.peptides and oligopeptides10 (1.26%)1001223100
1.1PS.lightreaction9 (1.14%)0000322101
28DNA9 (1.14%)0002241000
29.4.1.57protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII9 (1.14%)0004310001
29.5protein.degradation9 (1.14%)2200131000
31cell9 (1.14%)3201001002
2.2.2.1major CHO metabolism.degradation.starch.starch cleavage8 (1.01%)0002113001
16secondary metabolism8 (1.01%)0101202002
20.2.99stress.abiotic.unspecified8 (1.01%)1005001100
27.3.22RNA.regulation of transcription.HB,Homeobox transcription factor family8 (1.01%)1100302001
27.3.23RNA.regulation of transcription.HSF,Heat-shock transcription factor family8 (1.01%)0201211001
29.2protein.synthesis8 (1.01%)0201021101
29.3protein.targeting8 (1.01%)0000241001
31.1cell.organisation8 (1.01%)3201001001
2.2.2.1.2major CHO metabolism.degradation.starch.starch cleavage.beta amylase7 (0.88%)0002112001
18Co-factor and vitamine metabolism7 (0.88%)1101031000
20.1stress.biotic7 (0.88%)0200011102
26.18misc.invertase/pectin methylesterase inhibitor family protein7 (0.88%)1201110001
7OPP6 (0.76%)0101110101
7.1OPP.oxidative PP6 (0.76%)0101110101
18.2Co-factor and vitamine metabolism.thiamine6 (0.76%)1101021000
30.4signalling.phosphinositides6 (0.76%)0100310100
7.1.3OPP.oxidative PP.6-phosphogluconate dehydrogenase6 (0.76%)0101110101
20.2.3stress.abiotic.drought/salt5 (0.63%)0000311000
27.3.20RNA.regulation of transcription.G2-like transcription factor family, GARP5 (0.63%)0201200000
29.2.1.1.1.1.530protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S30A5 (0.63%)0100021001
29.3.2protein.targeting.mitochondria5 (0.63%)0000211001
29.5.11.4.2protein.degradation.ubiquitin.E3.RING5 (0.63%)1200101000
3.6minor CHO metabolism.callose5 (0.63%)1000210001
34.99transport.misc5 (0.63%)0000212000
1.1.5PS.lightreaction.other electron carrier (ox/red)4 (0.51%)0000021100
9mitochondrial electron transport / ATP synthesis4 (0.51%)0100210000
11.2lipid metabolism.FA desaturation4 (0.51%)0000210100
11.2.3lipid metabolism.FA desaturation.omega 3 desaturase4 (0.51%)0000210100
11.9lipid metabolism.lipid degradation4 (0.51%)0201010000
11.9.3lipid metabolism.lipid degradation.lysophospholipases4 (0.51%)0201010000
15metal handling4 (0.51%)1001110000
15.2metal handling.binding, chelation and storage4 (0.51%)1001110000
17.2hormone metabolism.auxin4 (0.51%)1001011000
17.2.1hormone metabolism.auxin.synthesis-degradation4 (0.51%)1001011000
21.4redox.glutaredoxins4 (0.51%)0000200101
21.6redox.dismutases and catalases4 (0.51%)1001000101
28.1DNA.synthesis/chromatin structure4 (0.51%)0001030000
29.2.2protein.synthesis.ribosome biogenesis4 (0.51%)0201010000
29.2.2.3protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications4 (0.51%)0201010000
29.2.2.3.1protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs4 (0.51%)0201010000
29.2.4protein.synthesis.elongation4 (0.51%)0000011101
30.11signalling.light4 (0.51%)1100100100
30.4.4signalling.phosphinositides.phosphoinositide phospholipase C4 (0.51%)0100110100
1.1.1PS.lightreaction.photosystem II3 (0.38%)0000201000
1.1.1.1PS.lightreaction.photosystem II.LHC-II3 (0.38%)0000201000
1.1.5.1PS.lightreaction.other electron carrier (ox/red).plastocyanin3 (0.38%)0000020100
11.8lipid metabolism.exotics(steroids, squalene etc)3 (0.38%)0001001001
11.8.1lipid metabolism.exotics (steroids, squalene etc).sphingolipids3 (0.38%)0001001001
2.1major CHO metabolism.synthesis3 (0.38%)0000210000
16.7secondary metabolism.wax3 (0.38%)0001101000
2.1.2major CHO metabolism.synthesis.starch3 (0.38%)0000210000
2.1.2.4major CHO metabolism.synthesis.starch.debranching3 (0.38%)0000210000
2.2.2.2major CHO metabolism.degradation.starch.starch phosphorylase3 (0.38%)0100001001
27.3.12RNA.regulation of transcription.C3H zinc finger family3 (0.38%)0200010000
27.3.3RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family3 (0.38%)0000020100
27.3.57RNA.regulation of transcription.JUMONJI family3 (0.38%)0000201000
3.1minor CHO metabolism.raffinose family3 (0.38%)0100002000
9.6mitochondrial electron transport / ATP synthesis.cytochrome c3 (0.38%)0100200000
28.2DNA.repair3 (0.38%)0001200000
3.1.2minor CHO metabolism.raffinose family.raffinose synthases3 (0.38%)0100002000
3.1.2.2minor CHO metabolism.raffinose family.raffinose synthases.putative3 (0.38%)0100002000
30.2.99signalling.receptor kinases.misc3 (0.38%)0003000000
3.5minor CHO metabolism.others2 (0.25%)0001010000
4glycolysis2 (0.25%)1100000000
4.2glycolysis.plastid branch2 (0.25%)1100000000
10cell wall2 (0.25%)2000000000
10.6cell wall.degradation2 (0.25%)2000000000
10.6.3cell wall.degradation.pectate lyases and polygalacturonases2 (0.25%)2000000000
11.9.3.2lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase2 (0.25%)0001010000
13amino acid metabolism2 (0.25%)0000110000
13.1amino acid metabolism.synthesis2 (0.25%)0000110000
13.1.1amino acid metabolism.synthesis.central amino acid metabolism2 (0.25%)0000110000
13.1.1.1amino acid metabolism.synthesis.central amino acid metabolism.GABA2 (0.25%)0000110000
13.1.1.1.1amino acid metabolism.synthesis.central amino acid metabolism.GABA.Glutamate decarboxylase2 (0.25%)0000110000
16.1secondary metabolism.isoprenoids2 (0.25%)0100100000
16.1.3secondary metabolism.isoprenoids.tocopherol biosynthesis2 (0.25%)0100100000
16.4secondary metabolism.N misc2 (0.25%)0000000002
16.4.1secondary metabolism.N misc.alkaloid-like2 (0.25%)0000000002
17.5hormone metabolism.ethylene2 (0.25%)0100100000
17.6hormone metabolism.gibberelin2 (0.25%)0000001001
17.6.2hormone metabolism.gibberelin.signal transduction2 (0.25%)0000001001
2.2.2.4major CHO metabolism.degradation.starch.D enzyme2 (0.25%)0000100001
20.1.7stress.biotic.PR-proteins2 (0.25%)0000001001
21.1redox.thioredoxin2 (0.25%)0000100001
23nucleotide metabolism2 (0.25%)0001001000
23.4nucleotide metabolism.phosphotransfer and pyrophosphatases2 (0.25%)0001001000
23.4.3nucleotide metabolism.phosphotransfer and pyrophosphatases.uridylate kinase2 (0.25%)0001001000
26.2misc.UDP glucosyl and glucoronyl transferases2 (0.25%)1100000000
26.6misc.O-methyl transferases2 (0.25%)0000010001
27.3.11RNA.regulation of transcription.C2H2 zinc finger family2 (0.25%)0000100001
27.3.24RNA.regulation of transcription.MADS box transcription factor family2 (0.25%)0000110000
27.3.35RNA.regulation of transcription.bZIP transcription factor family2 (0.25%)0000000101
27.3.62RNA.regulation of transcription.Nucleosome/chromatin assembly factor group2 (0.25%)0000110000
27.3.99RNA.regulation of transcription.unclassified2 (0.25%)0000100001
28.1.3DNA.synthesis/chromatin structure.histone2 (0.25%)0000020000
28.99DNA.unspecified2 (0.25%)0000011000
29.1protein.aa activation2 (0.25%)1000010000
29.1.22protein.aa activation.asparagine-tRNA ligase2 (0.25%)1000010000
29.2.1.1.1.1.2protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S22 (0.25%)0000010100
29.5.11.4.5.2protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ2 (0.25%)0000010100
29.5.3protein.degradation.cysteine protease2 (0.25%)1100000000
29.5.5protein.degradation.serine protease2 (0.25%)0000011000
30.4.1signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase2 (0.25%)0000200000
34.16transport.ABC transporters and multidrug resistance systems2 (0.25%)0001000100
34.21transport.calcium2 (0.25%)0000101000
34.8transport.metabolite transporters at the envelope membrane2 (0.25%)0000011000
34.9transport.metabolite transporters at the mitochondrial membrane2 (0.25%)0101000000
4.2.2glycolysis.plastid branch.phosphoglucomutase (PGM)2 (0.25%)1100000000
1.1.2PS.lightreaction.photosystem I1 (0.13%)0000100000
1.1.2.2PS.lightreaction.photosystem I.PSI polypeptide subunits1 (0.13%)0000100000
1.1.4PS.lightreaction.ATP synthase1 (0.13%)0000000001
1.1.4.2PS.lightreaction.ATP synthase.beta subunit1 (0.13%)0000000001
1.1.5.3PS.lightreaction.other electron carrier (ox/red).ferredoxin reductase1 (0.13%)0000001000
1.2PS.photorespiration1 (0.13%)0100000000
1.2.5PS.photorespiration.serine hydroxymethyltransferase1 (0.13%)0100000000
1.3PS.calvin cycle1 (0.13%)0000010000
1.3.1PS.calvin cycle.rubisco large subunit1 (0.13%)0000010000
5fermentation1 (0.13%)0001000000
11.1lipid metabolism.FA synthesis and FA elongation1 (0.13%)0000010000
11.1.15lipid metabolism.FA synthesis and FA elongation.ACP desaturase1 (0.13%)0000010000
11.3lipid metabolism.Phospholipid synthesis1 (0.13%)0000010000
11.9.3.4lipid metabolism.lipid degradation.lysophospholipases.phospholipase A21 (0.13%)0100000000
16.1.3.2secondary metabolism.isoprenoids.tocopherol biosynthesis.homogentisate phytyltransferase1 (0.13%)0000100000
16.1.3.5secondary metabolism.isoprenoids.tocopherol biosynthesis.tocopherol methyltransferase1 (0.13%)0100000000
16.8secondary metabolism.flavonoids1 (0.13%)0000001000
16.8.3secondary metabolism.flavonoids.dihydroflavonols1 (0.13%)0000001000
16.8.3.1secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase1 (0.13%)0000001000
17.3hormone metabolism.brassinosteroid1 (0.13%)0000100000
17.3.2hormone metabolism.brassinosteroid.signal transduction1 (0.13%)0000100000
17.3.2.2hormone metabolism.brassinosteroid.signal transduction.BZR1 (0.13%)0000100000
17.4hormone metabolism.cytokinin1 (0.13%)0000000001
17.4.2hormone metabolism.cytokinin.signal transduction1 (0.13%)0000000001
17.5.2hormone metabolism.ethylene.signal transduction1 (0.13%)0000100000
17.5.3hormone metabolism.ethylene.induced-regulated-responsive-activated1 (0.13%)0100000000
17.8hormone metabolism.salicylic acid1 (0.13%)0000000001
17.8.1hormone metabolism.salicylic acid.synthesis-degradation1 (0.13%)0000000001
18.7Co-factor and vitamine metabolism.iron-sulphur clusters1 (0.13%)0000010000
19tetrapyrrole synthesis1 (0.13%)0000010000
19.99tetrapyrrole synthesis.unspecified1 (0.13%)0000010000
2.2.2.6major CHO metabolism.degradation.starch.transporter1 (0.13%)0000010000
20.2.2stress.abiotic.cold1 (0.13%)0000001000
21.2redox.ascorbate and glutathione1 (0.13%)0100000000
21.2.1redox.ascorbate and glutathione.ascorbate1 (0.13%)0100000000
25C1-metabolism1 (0.13%)0100000000
25.1C1-metabolism.glycine hydroxymethyltransferase1 (0.13%)0100000000
26.10misc.cytochrome P4501 (0.13%)0100000000
26.1misc.misc21 (0.13%)0000010000
26.13misc.acid and other phosphatases1 (0.13%)0000010000
26.17misc.dynamin1 (0.13%)1000000000
26.22misc.short chain dehydrogenase/reductase (SDR)1 (0.13%)1000000000
26.28misc.GDSL-motif lipase1 (0.13%)0000001000
27.1.19RNA.processing.ribonucleases1 (0.13%)0000001000
27.3.1RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family1 (0.13%)0000000001
27.3.25RNA.regulation of transcription.MYB domain transcription factor family1 (0.13%)0000000100
27.3.26RNA.regulation of transcription.MYB-related transcription factor family1 (0.13%)0001000000
27.3.27RNA.regulation of transcription.NAC domain transcription factor family1 (0.13%)1000000000
27.3.69RNA.regulation of transcription.SET-domain transcriptional regulator family1 (0.13%)0000100000
27.3.71RNA.regulation of transcription.SNF71 (0.13%)0000010000
27.3.73RNA.regulation of transcription.Zn-finger(CCHC)1 (0.13%)0000000001
27.3.85RNA.regulation of transcription.sigma like plant1 (0.13%)1000000000
27.3.9RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family1 (0.13%)0000000100
29.3.1protein.targeting.nucleus1 (0.13%)0000010000
29.3.3protein.targeting.chloroplast1 (0.13%)0000010000
29.3.4protein.targeting.secretory pathway1 (0.13%)0000010000
29.3.4.99protein.targeting.secretory pathway.unspecified1 (0.13%)0000010000
29.5.1protein.degradation.subtilases1 (0.13%)0100000000
29.5.11protein.degradation.ubiquitin1 (0.13%)0000100000
29.5.11.3protein.degradation.ubiquitin.E21 (0.13%)0000100000
29.5.9protein.degradation.AAA type1 (0.13%)0000010000
29.8protein.assembly and cofactor ligation1 (0.13%)0000010000
3.1.2.1minor CHO metabolism.raffinose family.raffinose synthases.known1 (0.13%)0000001000
30.2.11signalling.receptor kinases.leucine rich repeat XI1 (0.13%)0000100000
30.2.24signalling.receptor kinases.S-locus glycoprotein like1 (0.13%)0000001000
30.2.8signalling.receptor kinases.leucine rich repeat VIII1 (0.13%)1000000000
30.2.8.2signalling.receptor kinases.leucine rich repeat VIII.VIII-21 (0.13%)1000000000
5.10fermentation.aldehyde dehydrogenase1 (0.13%)0001000000
9.9mitochondrial electron transport / ATP synthesis.F1-ATPase1 (0.13%)0000010000
31.4cell.vesicle transport1 (0.13%)0000000001
34.4transport.nitrate1 (0.13%)1000000000