MapMan terms associated with a binding site

Binding site
Matrix_84
Name
AtGRF6
Description
N/A
#Associated genes
764
#Associated MapMan terms
270

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MapMan Description #Associated genes ath bra cme egr gma ptr ppe sly stu vvi
27RNA148 (19.37%)5150366161515013
27.3RNA.regulation of transcription128 (16.75%)2120259161313011
29protein87 (11.39%)36013116137010
29.4protein.postranslational modification53 (6.94%)240120106505
33development27 (3.53%)04001260203
17hormone metabolism26 (3.40%)11001152105
30signalling26 (3.40%)0000783305
33.99development.unspecified26 (3.40%)03001260203
31cell22 (2.88%)0100632505
29.5protein.degradation20 (2.62%)0200653103
28DNA19 (2.49%)0001930402
11lipid metabolism18 (2.36%)1002551301
28.1DNA.synthesis/chromatin structure18 (2.36%)0001920402
31.1cell.organisation16 (2.09%)0100411504
17.2hormone metabolism.auxin14 (1.83%)1000531103
17.2.3hormone metabolism.auxin.induced-regulated-responsive-activated14 (1.83%)1000531103
26misc14 (1.83%)1200421103
27.3.22RNA.regulation of transcription.HB,Homeobox transcription factor family14 (1.83%)0000632201
29.4.1protein.postranslational modification.kinase14 (1.83%)0001612202
34transport14 (1.83%)0200342102
27.3.99RNA.regulation of transcription.unclassified13 (1.70%)0200711101
29.4.1.57protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII13 (1.70%)0001612102
30.2signalling.receptor kinases13 (1.70%)0000441103
27.1RNA.processing12 (1.57%)2201500101
27.3.3RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family12 (1.57%)0000532002
27.3.37RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family10 (1.31%)0100600201
10cell wall9 (1.18%)0000242001
20stress9 (1.18%)0000500202
23nucleotide metabolism9 (1.18%)0201410100
29.5.11.4.2protein.degradation.ubiquitin.E3.RING9 (1.18%)1000121202
13amino acid metabolism8 (1.05%)0100211201
8TCA / org transformation7 (0.92%)0100230100
13.1amino acid metabolism.synthesis7 (0.92%)0100211101
20.2stress.abiotic7 (0.92%)0000300202
27.3.4RNA.regulation of transcription.ARF, Auxin Response Factor family7 (0.92%)0000421000
27.4RNA.RNA binding7 (0.92%)1100201101
29.3protein.targeting7 (0.92%)0000311101
29.5.11protein.degradation.ubiquitin7 (0.92%)0100111102
20.2.1stress.abiotic.heat6 (0.79%)0000200202
27.3.25RNA.regulation of transcription.MYB domain transcription factor family6 (0.79%)0101200200
27.3.8RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family6 (0.79%)0000420000
30.5signalling.G-proteins6 (0.79%)0000131100
1PS5 (0.65%)0001001300
8.2TCA / org transformation.other organic acid transformations5 (0.65%)0100120100
9mitochondrial electron transport / ATP synthesis5 (0.65%)0000110102
10.5cell wall.cell wall proteins5 (0.65%)0000032000
11.1lipid metabolism.FA synthesis and FA elongation5 (0.65%)0001220000
17.4hormone metabolism.cytokinin5 (0.65%)0100310000
23.1nucleotide metabolism.synthesis5 (0.65%)0001300100
27.1.1RNA.processing.splicing5 (0.65%)0100400000
27.3.11RNA.regulation of transcription.C2H2 zinc finger family5 (0.65%)0001102001
27.3.29RNA.regulation of transcription.TCP transcription factor family5 (0.65%)1100210000
29.2protein.synthesis5 (0.65%)1000103000
29.3.1protein.targeting.nucleus5 (0.65%)0000111101
30.2.11signalling.receptor kinases.leucine rich repeat XI5 (0.65%)0000011102
1.1PS.lightreaction4 (0.52%)0001000300
11.1.7lipid metabolism.FA synthesis and FA elongation.ACP thioesterase4 (0.52%)0001210000
11.9lipid metabolism.lipid degradation4 (0.52%)1000001101
13.1.4amino acid metabolism.synthesis.branched chain group4 (0.52%)0100111000
17.5hormone metabolism.ethylene4 (0.52%)0000200002
19tetrapyrrole synthesis4 (0.52%)0000111001
21redox4 (0.52%)0000010102
27.3.35RNA.regulation of transcription.bZIP transcription factor family4 (0.52%)0000301000
27.3.6RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family4 (0.52%)0000300001
27.3.9RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family4 (0.52%)0000111100
29.5.11.4.1protein.degradation.ubiquitin.E3.HECT4 (0.52%)1000210000
29.5.4protein.degradation.aspartate protease4 (0.52%)0000220000
30.2.17signalling.receptor kinases.DUF 264 (0.52%)0000030001
8.2.10TCA / org transformation.other organic acid transformatons.malic4 (0.52%)0100110100
9.1mitochondrial electron transport / ATP synthesis.NADH-DH4 (0.52%)0000110101
34.2transport.sugars4 (0.52%)0100020001
9.1.2mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear4 (0.52%)0000110101
2major CHO metabolism3 (0.39%)0000020001
10.5.1cell wall.cell wall proteins.AGPs3 (0.39%)0000021000
10.5.1.1cell wall.cell wall proteins.AGPs.AGP3 (0.39%)0000021000
11.10lipid metabolism.glycolipid synthesis3 (0.39%)0001100100
11.10.1lipid metabolism.glycolipid synthesis.MGDG synthase3 (0.39%)0001100100
11.3lipid metabolism.Phospholipid synthesis3 (0.39%)0000120000
11.8lipid metabolism.exotics(steroids, squalene etc)3 (0.39%)0000110100
13.1.4.1amino acid metabolism.synthesis.branched chain group.common3 (0.39%)0000111000
13.1.4.1.4amino acid metabolism.synthesis.branched chain group.common.branched-chain amino acid aminotransferase3 (0.39%)0000111000
17.4.2hormone metabolism.cytokinin.signal transduction3 (0.39%)0000210000
2.2major CHO metabolism.degradation3 (0.39%)0000020001
19.1tetrapyrrole synthesis.glu-tRNA synthetase3 (0.39%)0000011001
22polyamine metabolism3 (0.39%)0000210000
22.1polyamine metabolism.synthesis3 (0.39%)0000210000
22.1.2polyamine metabolism.synthesis.SAM decarboxylase3 (0.39%)0000210000
23.1.1nucleotide metabolism.synthesis.pyrimidine3 (0.39%)0001200000
23.1.1.10nucleotide metabolism.synthesis.pyrimidine.CTP synthetase3 (0.39%)0001200000
26.2misc.UDP glucosyl and glucoronyl transferases3 (0.39%)1100100000
26.22misc.short chain dehydrogenase/reductase (SDR)3 (0.39%)0100001001
27.1.2RNA.processing.RNA helicase3 (0.39%)1001000100
27.3.12RNA.regulation of transcription.C3H zinc finger family3 (0.39%)0000300000
27.3.21RNA.regulation of transcription.GRAS transcription factor family3 (0.39%)1000010001
27.3.67RNA.regulation of transcription.putative transcription regulator3 (0.39%)0000100101
29.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX3 (0.39%)0100100100
30.11signalling.light3 (0.39%)0000201000
30.2.99signalling.receptor kinases.misc3 (0.39%)0000300000
31.2cell.division3 (0.39%)0000200001
31.4cell.vesicle transport3 (0.39%)0000021000
34.19transport.Major Intrinsic Proteins3 (0.39%)0100200000
1.1.3PS.lightreaction.cytochrome b6/f2 (0.26%)0000000200
1.1.3.3PS.lightreaction.cytochrome b6/f.cytochrome b6 (CYB6)2 (0.26%)0000000200
3minor CHO metabolism2 (0.26%)0100001000
10.6cell wall.degradation2 (0.26%)0000110000
10.6.1cell wall.degradation.cellulases and beta -1,4-glucanases2 (0.26%)0000110000
10.7cell wall.modification2 (0.26%)0000100001
11.8.1lipid metabolism.exotics (steroids, squalene etc).sphingolipids2 (0.26%)0000100100
11.8.1.2lipid metabolism.exotics (steroids, squalene etc).sphingolipids.serine C-palmitoyltransferase2 (0.26%)0000100100
11.9.2lipid metabolism.lipid degradation.lipases2 (0.26%)1000001000
11.9.2.1lipid metabolism.lipid degradation.lipases.triacylglycerol lipase2 (0.26%)1000001000
11.9.3lipid metabolism.lipid degradation.lysophospholipases2 (0.26%)0000000101
11.9.3.2lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase2 (0.26%)0000000101
13.1.2amino acid metabolism.synthesis.glutamate family2 (0.26%)0000100001
13.1.2.2amino acid metabolism.synthesis.glutamate family.proline2 (0.26%)0000100001
14.2S-assimilation.APR2 (0.26%)0000100100
2.2.2major CHO metabolism.degradation.starch2 (0.26%)0000020000
2.2.2.1major CHO metabolism.degradation.starch.starch cleavage2 (0.26%)0000020000
14S-assimilation2 (0.26%)0000100100
16secondary metabolism2 (0.26%)0000011000
17.4.1hormone metabolism.cytokinin.synthesis-degradation2 (0.26%)0100100000
17.5.3hormone metabolism.ethylene.induced-regulated-responsive-activated2 (0.26%)0000200000
18Co-factor and vitamine metabolism2 (0.26%)0000011000
18.7Co-factor and vitamine metabolism.iron-sulphur clusters2 (0.26%)0000011000
20.1stress.biotic2 (0.26%)0000200000
21.1redox.thioredoxin2 (0.26%)0000000101
23.1.2nucleotide metabolism.synthesis.purine2 (0.26%)0000100100
8.1TCA / org transformation.TCA2 (0.26%)0000110000
24Biodegradation of Xenobiotics2 (0.26%)0000000101
26.3misc.gluco-, galacto- and mannosidases2 (0.26%)0000110000
26.3.4misc.gluco-, galacto- and mannosidases.endoglucanase2 (0.26%)0000110000
26.7misc.oxidases - copper, flavone etc2 (0.26%)0000010100
27.3.1RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family2 (0.26%)0000011000
27.3.18RNA.regulation of transcription.E2F/DP transcription factor family2 (0.26%)0000200000
27.3.20RNA.regulation of transcription.G2-like transcription factor family, GARP2 (0.26%)0000200000
27.3.32RNA.regulation of transcription.WRKY domain transcription factor family2 (0.26%)0100100000
27.3.44RNA.regulation of transcription.Chromatin Remodeling Factors2 (0.26%)0100000100
27.3.52RNA.regulation of transcription.Global transcription factor group2 (0.26%)0100000100
27.3.57RNA.regulation of transcription.JUMONJI family2 (0.26%)0000100100
27.3.64RNA.regulation of transcription.PHOR12 (0.26%)0000001001
27.3.65RNA.regulation of transcription.Polycomb Group (PcG)2 (0.26%)0200000000
27.3.69RNA.regulation of transcription.SET-domain transcriptional regulator family2 (0.26%)0000100100
29.1protein.aa activation2 (0.26%)0000100001
29.2.2protein.synthesis.ribosome biogenesis2 (0.26%)1000001000
29.2.4protein.synthesis.elongation2 (0.26%)0000002000
29.3.4protein.targeting.secretory pathway2 (0.26%)0000200000
29.5.2protein.degradation.autophagy2 (0.26%)0000110000
29.5.9protein.degradation.AAA type2 (0.26%)0000001001
30.4signalling.phosphinositides2 (0.26%)0000010001
34.12transport.metal2 (0.26%)0000101000
1.1.1PS.lightreaction.photosystem II1 (0.13%)0001000000
1.1.1.2PS.lightreaction.photosystem II.PSII polypeptide subunits1 (0.13%)0001000000
1.1.40PS.lightreaction.cyclic electron flow-chlororespiration1 (0.13%)0000000100
1.3PS.calvin cycle1 (0.13%)0000001000
1.3.7PS.calvin cycle.FBPase1 (0.13%)0000001000
7OPP1 (0.13%)0000010000
10.5.4cell wall.cell wall proteins.HRGP1 (0.13%)0000001000
10.5.5cell wall.cell wall proteins.RGP1 (0.13%)0000010000
11.1.1lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation1 (0.13%)0000010000
11.1.1.2lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex1 (0.13%)0000010000
11.1.1.2.3lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxyl Carrier Protein1 (0.13%)0000010000
11.3.4lipid metabolism.Phospholipid synthesis.CDP-diacylglycerol-inositol 3-phosphatidyltransferase1 (0.13%)0000100000
11.3.5lipid metabolism.Phospholipid synthesis.diacylglycerol kinase1 (0.13%)0000010000
11.3.7lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase1 (0.13%)0000010000
11.8.7lipid metabolism.exotics (steroids, squalene etc).trans-2-enoyl-CoA reductase (NADPH)1 (0.13%)0000010000
12.1N-metabolism.nitrate metabolism1 (0.13%)0100000000
12.1.2N-metabolism.nitrate metabolism.nitrite reductase1 (0.13%)0100000000
13.1.2.3.23amino acid metabolism.synthesis.glutamate family.arginine.argininosuccinate lyase1 (0.13%)0000001000
13.1.4.4amino acid metabolism.synthesis.branched chain group.leucine specific1 (0.13%)0100000000
13.1.4.4.1amino acid metabolism.synthesis.branched chain group.leucine specific.2-isopropylmalate synthase1 (0.13%)0100000000
13.1.6amino acid metabolism.synthesis.aromatic aa1 (0.13%)0000000100
13.1.6.3amino acid metabolism.synthesis.aromatic aa.phenylalanine1 (0.13%)0000000100
13.1.6.3.1amino acid metabolism.synthesis.aromatic aa.phenylalanine.arogenate dehydratase / prephenate dehydratase1 (0.13%)0000000100
13.2amino acid metabolism.degradation1 (0.13%)0000000100
13.2.6amino acid metabolism.degradation.aromatic aa1 (0.13%)0000000100
13.2.6.2amino acid metabolism.degradation.aromatic aa.tyrosine1 (0.13%)0000000100
15.2metal handling.binding, chelation and storage1 (0.13%)0000010000
16.7secondary metabolism.wax1 (0.13%)0000001000
16.8secondary metabolism.flavonoids1 (0.13%)0000010000
16.8.1secondary metabolism.flavonoids.anthocyanins1 (0.13%)0000010000
16.8.1.21secondary metabolism.flavonoids.anthocyanins.anthocyanin 5-aromatic acyltransferase1 (0.13%)0000010000
17.1hormone metabolism.abscisic acid1 (0.13%)0000010000
17.1.1hormone metabolism.abscisic acid.synthesis-degradation1 (0.13%)0000010000
17.3hormone metabolism.brassinosteroid1 (0.13%)0000100000
17.3.2hormone metabolism.brassinosteroid.signal transduction1 (0.13%)0000100000
17.3.2.2hormone metabolism.brassinosteroid.signal transduction.BZR1 (0.13%)0000100000
17.5.1hormone metabolism.ethylene.synthesis-degradation1 (0.13%)0000000001
17.5.2hormone metabolism.ethylene.signal transduction1 (0.13%)0000000001
17.6hormone metabolism.gibberelin1 (0.13%)0000001000
17.6.3hormone metabolism.gibberelin.induced-regulated-responsive-activated1 (0.13%)0000001000
19.20tetrapyrrole synthesis.ferrochelatase1 (0.13%)0000100000
2.2.1major CHO metabolism.degradation.sucrose1 (0.13%)0000000001
2.2.1.3major CHO metabolism.degradation.sucrose.invertases1 (0.13%)0000000001
2.2.1.3.1major CHO metabolism.degradation.sucrose.invertases.neutral1 (0.13%)0000000001
2.2.2.1.2major CHO metabolism.degradation.starch.starch cleavage.beta amylase1 (0.13%)0000010000
20.1.3stress.biotic.signalling1 (0.13%)0000100000
20.1.3.1stress.biotic.signalling.MLO-like1 (0.13%)0000100000
20.2.3stress.abiotic.drought/salt1 (0.13%)0000100000
21.2redox.ascorbate and glutathione1 (0.13%)0000000001
21.2.1redox.ascorbate and glutathione.ascorbate1 (0.13%)0000000001
21.2.1.2redox.ascorbate and glutathione.ascorbate.GDP-L-galactose-hexose-1-phosphate guanyltransferase1 (0.13%)0000000001
21.5redox.peroxiredoxin1 (0.13%)0000010000
23.1.2.3nucleotide metabolism.synthesis.purine.GAR transformylase1 (0.13%)0000000100
23.1.2.6nucleotide metabolism.synthesis.purine.AIR carboxylase1 (0.13%)0000100000
23.2nucleotide metabolism.degradation1 (0.13%)0000100000
23.3nucleotide metabolism.salvage1 (0.13%)0000010000
23.3.1nucleotide metabolism.salvage.phosphoribosyltransferases1 (0.13%)0000010000
23.3.1.3nucleotide metabolism.salvage.phosphoribosyltransferases.upp1 (0.13%)0000010000
23.4nucleotide metabolism.phosphotransfer and pyrophosphatases1 (0.13%)0100000000
23.4.10nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase1 (0.13%)0100000000
23.5nucleotide metabolism.deoxynucleotide metabolism1 (0.13%)0100000000
23.5.3nucleotide metabolism.deoxynucleotide metabolism.cytosine deaminase1 (0.13%)0100000000
26.10misc.cytochrome P4501 (0.13%)0000100000
26.13misc.acid and other phosphatases1 (0.13%)0000100000
26.14misc.oxygenases1 (0.13%)0000010000
26.19misc.plastocyanin-like1 (0.13%)0000000001
26.28misc.GDSL-motif lipase1 (0.13%)0000000001
27.2RNA.transcription1 (0.13%)0000001000
27.3.10RNA.regulation of transcription.C2C2(Zn) YABBY family1 (0.13%)0000001000
27.3.13RNA.regulation of transcription.CCAAT box binding factor family, DR11 (0.13%)0000010000
27.3.23RNA.regulation of transcription.HSF,Heat-shock transcription factor family1 (0.13%)0000100000
27.3.36RNA.regulation of transcription.Argonaute1 (0.13%)0000000001
27.3.50RNA.regulation of transcription.General Transcription1 (0.13%)0100000000
27.3.66RNA.regulation of transcription.Psudo ARR transcription factor family1 (0.13%)0000100000
27.3.7RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family1 (0.13%)0100000000
28.99DNA.unspecified1 (0.13%)0000010000
29.1.21protein.aa activation.histidine-tRNA ligase1 (0.13%)0000000001
29.1.22protein.aa activation.asparagine-tRNA ligase1 (0.13%)0000100000
29.2.1.1.1.2.20protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L201 (0.13%)0000100000
29.2.1.2.1.27protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S271 (0.13%)0000100000
29.2.1.2.1.6protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S61 (0.13%)0000100000
29.2.1.2.2.17protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L171 (0.13%)0000000001
29.2.1.2.2.527protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L27A1 (0.13%)0000100000
29.2.1.2.2.7protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L71 (0.13%)0000100000
29.2.1.99.1.19protein.synthesis.ribosomal protein.unknown.small subunit.S191 (0.13%)0000000100
29.2.5protein.synthesis.release1 (0.13%)0000100000
29.3.4.3protein.targeting.secretory pathway.vacuole1 (0.13%)0000100000
29.3.4.99protein.targeting.secretory pathway.unspecified1 (0.13%)0000100000
29.4.1.59protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX1 (0.13%)0000000100
29.5.11.2protein.degradation.ubiquitin.E11 (0.13%)0000000001
29.5.11.3protein.degradation.ubiquitin.E21 (0.13%)0000100000
29.5.7protein.degradation.metalloprotease1 (0.13%)0100000000
3.1minor CHO metabolism.raffinose family1 (0.13%)0100000000
3.1.2minor CHO metabolism.raffinose family.raffinose synthases1 (0.13%)0100000000
3.1.2.2minor CHO metabolism.raffinose family.raffinose synthases.putative1 (0.13%)0100000000
3.5minor CHO metabolism.others1 (0.13%)0000001000
30.2.3signalling.receptor kinases.leucine rich repeat III1 (0.13%)0000100000
30.3signalling.calcium1 (0.13%)0000000100
30.4.1signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase1 (0.13%)0000000001
30.4.2signalling.phosphinositides.phosphatidylinositol 4-kinase1 (0.13%)0000010000
30.6signalling.MAP kinases1 (0.13%)0000000001
33.30development.multitarget1 (0.13%)0100000000
33.30.1development.multitarget.target of rapamycin1 (0.13%)0100000000
34.19.1transport.Major Intrinsic Proteins.PIP1 (0.13%)0100000000
34.19.2transport.Major Intrinsic Proteins.TIP1 (0.13%)0000100000
34.19.3transport.Major Intrinsic Proteins.NIP1 (0.13%)0000100000
7.2OPP.non-reductive PP1 (0.13%)0000010000
34.13transport.peptides and oligopeptides1 (0.13%)0000010000
34.16transport.ABC transporters and multidrug resistance systems1 (0.13%)0000010000
34.3transport.amino acids1 (0.13%)0000000100
34.4transport.nitrate1 (0.13%)0000000001
34.99transport.misc1 (0.13%)0000001000
7.2.2OPP.non-reductive PP.transaldolase1 (0.13%)0000010000
8.1.1TCA / org transformation.TCA.pyruvate DH1 (0.13%)0000010000
8.1.1.1TCA / org transformation.TCA.pyruvate DH.E11 (0.13%)0000010000
8.1.7TCA / org transformation.TCA.succinate dehydrogenase1 (0.13%)0000100000
8.2.4TCA / org transformation.other organic acid transformatons.IDH1 (0.13%)0000010000
9.7mitochondrial electron transport / ATP synthesis.cytochrome c oxidase1 (0.13%)0000000001
12N-metabolism1 (0.13%)0100000000
15metal handling1 (0.13%)0000010000