PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_68
Name: AtMYB77
Description: More than 80 R2R3-MYB regulatory genes in the genome of Arabidopsis thaliana. Plant J 14: 273-84

#Associated genes: 715
#Associated MapMan terms: 208

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	112 (15.66%)	3	14	7	29	39	5	5	10
27.3	RNA.regulation of transcription	103 (14.41%)	3	14	7	27	33	5	5	9
29	protein	64 (8.95%)	0	3	2	21	16	5	8	9
34	transport	56 (7.83%)	7	3	6	8	12	4	8	8
30	signalling	46 (6.43%)	1	5	3	11	11	2	4	9
29.4	protein.postranslational modification	38 (5.31%)	0	2	1	13	11	3	4	4
10	cell wall	23 (3.22%)	4	8	2	1	1	0	2	5
33	development	20 (2.80%)	0	2	1	6	3	3	3	2
30.3	signalling.calcium	19 (2.66%)	1	2	1	2	7	0	3	3
31	cell	19 (2.66%)	0	1	1	7	5	2	1	2
33.99	development.unspecified	19 (2.66%)	0	2	1	6	2	3	3	2
10.6	cell wall.degradation	18 (2.52%)	3	7	2	1	0	0	2	3
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	18 (2.52%)	3	7	2	1	0	0	2	3
28	DNA	15 (2.10%)	0	3	2	6	1	0	0	3
28.1	DNA.synthesis/chromatin structure	15 (2.10%)	0	3	2	6	1	0	0	3
29.5	protein.degradation	15 (2.10%)	0	1	0	4	4	1	2	3
30.2	signalling.receptor kinases	15 (2.10%)	0	2	1	3	4	1	0	4
20	stress	14 (1.96%)	0	3	2	3	0	4	0	2
31.1	cell.organisation	14 (1.96%)	0	1	1	4	4	1	1	2
11	lipid metabolism	13 (1.82%)	0	1	1	2	5	2	1	1
21	redox	13 (1.82%)	0	0	2	5	4	1	0	1
20.2	stress.abiotic	12 (1.68%)	0	3	1	3	0	3	0	2
29.4.1	protein.postranslational modification.kinase	12 (1.68%)	0	0	0	4	5	1	1	1
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	12 (1.68%)	0	0	0	4	5	1	1	1
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	12 (1.68%)	0	1	1	3	2	1	0	4
34.99	transport.misc	12 (1.68%)	1	1	0	2	4	1	2	1
26	misc	11 (1.54%)	1	2	0	2	2	2	1	1
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	11 (1.54%)	1	0	1	4	1	1	0	3
17	hormone metabolism	10 (1.40%)	0	1	1	4	2	1	0	1
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	10 (1.40%)	1	1	0	0	4	1	1	2
27.3.37	RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family	10 (1.40%)	0	4	0	3	2	0	0	1
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	10 (1.40%)	1	1	1	3	3	1	0	0
27.3.99	RNA.regulation of transcription.unclassified	10 (1.40%)	0	1	0	2	4	0	1	2
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	9 (1.26%)	1	2	2	0	3	0	0	1
30.2.11	signalling.receptor kinases.leucine rich repeat XI	9 (1.26%)	0	1	0	2	3	1	0	2
34.1	transport.p- and v-ATPases	9 (1.26%)	1	0	1	2	1	1	2	1
34.16	transport.ABC transporters and multidrug resistance systems	9 (1.26%)	1	0	2	0	2	1	1	2
28.1.3	DNA.synthesis/chromatin structure.histone	8 (1.12%)	0	1	1	3	0	0	0	3
29.7	protein.glycosylation	8 (1.12%)	0	0	0	2	1	1	2	2
11.9	lipid metabolism.lipid degradation	7 (0.98%)	0	0	1	1	2	1	1	1
11.9.3	lipid metabolism.lipid degradation.lysophospholipases	7 (0.98%)	0	0	1	1	2	1	1	1
21.2	redox.ascorbate and glutathione	7 (0.98%)	0	0	1	3	2	0	0	1
30.5	signalling.G-proteins	7 (0.98%)	0	0	0	3	0	1	1	2
9	mitochondrial electron transport / ATP synthesis	6 (0.84%)	1	0	0	2	0	1	2	0
17.2	hormone metabolism.auxin	6 (0.84%)	0	1	0	3	1	1	0	0
21.4	redox.glutaredoxins	6 (0.84%)	0	0	1	2	2	1	0	0
1	PS	5 (0.70%)	0	1	0	0	3	0	0	1
16	secondary metabolism	5 (0.70%)	0	0	1	0	1	1	2	0
27.3.30	RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family	5 (0.70%)	0	0	0	4	1	0	0	0
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	5 (0.70%)	0	1	0	1	2	0	1	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	5 (0.70%)	0	1	0	0	4	0	0	0
27.4	RNA.RNA binding	5 (0.70%)	0	0	0	2	2	0	0	1
29.5.5	protein.degradation.serine protease	5 (0.70%)	0	0	0	2	1	0	1	1
34.15	transport.potassium	5 (0.70%)	1	0	1	1	0	0	2	0
34.19	transport.Major Intrinsic Proteins	5 (0.70%)	1	0	1	0	1	0	0	2
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	4 (0.56%)	0	1	0	3	0	0	0	0
20.2.99	stress.abiotic.unspecified	4 (0.56%)	0	1	0	0	0	2	0	1
21.2.1	redox.ascorbate and glutathione.ascorbate	4 (0.56%)	0	0	0	2	1	0	0	1
21.2.1.2	redox.ascorbate and glutathione.ascorbate.GDP-L-galactose-hexose-1-phosphate guanyltransferase	4 (0.56%)	0	0	0	2	1	0	0	1
26.7	misc.oxidases - copper, flavone etc	4 (0.56%)	0	0	0	0	2	1	0	1
27.1	RNA.processing	4 (0.56%)	0	0	0	0	4	0	0	0
27.3.21	RNA.regulation of transcription.GRAS transcription factor family	4 (0.56%)	0	0	0	1	2	1	0	0
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	4 (0.56%)	0	0	1	1	0	0	2	0
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	4 (0.56%)	0	0	1	1	2	0	0	0
27.3.9	RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family	4 (0.56%)	0	0	1	0	2	0	0	1
29.2.1.2.2.535	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35A	4 (0.56%)	1	0	1	1	0	0	1	0
29.5.11	protein.degradation.ubiquitin	4 (0.56%)	0	1	0	1	2	0	0	0
30.4	signalling.phosphinositides	4 (0.56%)	0	1	0	3	0	0	0	0
31.4	cell.vesicle transport	4 (0.56%)	0	0	0	2	1	1	0	0
34.2	transport.sugars	4 (0.56%)	1	1	0	1	1	0	0	0
1.1	PS.lightreaction	3 (0.42%)	0	1	0	0	2	0	0	0
2	major CHO metabolism	3 (0.42%)	0	0	0	2	0	0	0	1
10.7	cell wall.modification	3 (0.42%)	1	1	0	0	0	0	0	1
11.1	lipid metabolism.FA synthesis and FA elongation	3 (0.42%)	0	1	0	0	2	0	0	0
11.9.3.1	lipid metabolism.lipid degradation.lysophospholipases.phospholipase D	3 (0.42%)	0	0	0	1	1	0	1	0
15	metal handling	3 (0.42%)	1	0	0	1	1	0	0	0
16.4	secondary metabolism.N misc	3 (0.42%)	0	0	1	0	0	1	1	0
16.4.1	secondary metabolism.N misc.alkaloid-like	3 (0.42%)	0	0	1	0	0	1	1	0
17.5	hormone metabolism.ethylene	3 (0.42%)	0	0	1	1	1	0	0	0
17.5.2	hormone metabolism.ethylene.signal transduction	3 (0.42%)	0	0	1	1	1	0	0	0
20.2.1	stress.abiotic.heat	3 (0.42%)	0	1	1	0	0	0	0	1
21.2.2	redox.ascorbate and glutathione.glutathione	3 (0.42%)	0	0	1	1	1	0	0	0
27.3.1	RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family	3 (0.42%)	0	0	0	1	1	0	0	1
27.3.12	RNA.regulation of transcription.C3H zinc finger family	3 (0.42%)	0	0	1	2	0	0	0	0
27.3.4	RNA.regulation of transcription.ARF, Auxin Response Factor family	3 (0.42%)	0	0	0	3	0	0	0	0
30.2.17	signalling.receptor kinases.DUF 26	3 (0.42%)	0	0	1	1	1	0	0	0
11.1.6	lipid metabolism.FA synthesis and FA elongation.enoyl ACP reductase	2 (0.28%)	0	0	0	0	2	0	0	0
17.2.2	hormone metabolism.auxin.signal transduction	2 (0.28%)	0	0	0	0	1	1	0	0
2.2	major CHO metabolism.degradation	2 (0.28%)	0	0	0	2	0	0	0	0
10.5	cell wall.cell wall proteins	2 (0.28%)	0	0	0	0	1	0	0	1
11.3	lipid metabolism.Phospholipid synthesis	2 (0.28%)	0	0	0	0	1	1	0	0
15.2	metal handling.binding, chelation and storage	2 (0.28%)	0	0	0	1	1	0	0	0
2.2.1	major CHO metabolism.degradation.sucrose	2 (0.28%)	0	0	0	2	0	0	0	0
2.2.1.4	major CHO metabolism.degradation.sucrose.hexokinase	2 (0.28%)	0	0	0	2	0	0	0	0
3	minor CHO metabolism	2 (0.28%)	0	0	0	0	1	0	0	1
20.1.7	stress.biotic.PR-proteins	2 (0.28%)	0	0	1	0	0	1	0	0
9.2	mitochondrial electron transport / ATP synthesis.NADH-DH	2 (0.28%)	0	0	0	1	0	0	1	0
9.9	mitochondrial electron transport / ATP synthesis.F1-ATPase	2 (0.28%)	0	0	0	1	0	1	0	0
20.1	stress.biotic	2 (0.28%)	0	0	1	0	0	1	0	0
26.13	misc.acid and other phosphatases	2 (0.28%)	0	1	0	0	0	1	0	0
26.8	misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases	2 (0.28%)	1	0	0	0	0	0	1	0
27.1.1	RNA.processing.splicing	2 (0.28%)	0	0	0	0	2	0	0	0
27.1.2	RNA.processing.RNA helicase	2 (0.28%)	0	0	0	0	2	0	0	0
27.3.26	RNA.regulation of transcription.MYB-related transcription factor family	2 (0.28%)	0	0	0	1	0	1	0	0
27.3.29	RNA.regulation of transcription.TCP transcription factor family	2 (0.28%)	0	0	0	1	0	0	0	1
27.3.54	RNA.regulation of transcription.Histone acetyltransferases	2 (0.28%)	0	0	0	1	1	0	0	0
29.3	protein.targeting	2 (0.28%)	0	0	0	2	0	0	0	0
29.5.11.3	protein.degradation.ubiquitin.E2	2 (0.28%)	0	1	0	0	1	0	0	0
29.5.11.5	protein.degradation.ubiquitin.ubiquitin protease	2 (0.28%)	0	0	0	1	1	0	0	0
29.5.2	protein.degradation.autophagy	2 (0.28%)	0	0	0	1	0	0	0	1
30.2.3	signalling.receptor kinases.leucine rich repeat III	2 (0.28%)	0	1	0	0	0	0	0	1
30.4.1	signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase	2 (0.28%)	0	1	0	1	0	0	0	0
34.12	transport.metal	2 (0.28%)	0	1	0	0	0	0	1	0
34.19.2	transport.Major Intrinsic Proteins.TIP	2 (0.28%)	0	0	1	0	0	0	0	1
34.19.3	transport.Major Intrinsic Proteins.NIP	2 (0.28%)	1	0	0	0	1	0	0	0
34.22	transport.cyclic nucleotide or calcium regulated channels	2 (0.28%)	1	0	0	0	1	0	0	0
34.7	transport.phosphate	2 (0.28%)	0	0	0	0	1	0	0	1
34.9	transport.metabolite transporters at the mitochondrial membrane	2 (0.28%)	0	0	0	1	0	0	0	1
1.1.1	PS.lightreaction.photosystem II	1 (0.14%)	0	1	0	0	0	0	0	0
1.1.1.1	PS.lightreaction.photosystem II.LHC-II	1 (0.14%)	0	1	0	0	0	0	0	0
1.1.2	PS.lightreaction.photosystem I	1 (0.14%)	0	0	0	0	1	0	0	0
1.1.2.2	PS.lightreaction.photosystem I.PSI polypeptide subunits	1 (0.14%)	0	0	0	0	1	0	0	0
1.1.30	PS.lightreaction.state transition	1 (0.14%)	0	0	0	0	1	0	0	0
1.2	PS.photorespiration	1 (0.14%)	0	0	0	0	1	0	0	0
1.2.2	PS.photorespiration.glycolate oxydase	1 (0.14%)	0	0	0	0	1	0	0	0
1.3	PS.calvin cycle	1 (0.14%)	0	0	0	0	0	0	0	1
1.3.7	PS.calvin cycle.FBPase	1 (0.14%)	0	0	0	0	0	0	0	1
10.5.1	cell wall.cell wall proteins.AGPs	1 (0.14%)	0	0	0	0	1	0	0	0
10.5.1.1	cell wall.cell wall proteins.AGPs.AGP	1 (0.14%)	0	0	0	0	1	0	0	0
10.5.3	cell wall.cell wall proteins.LRR	1 (0.14%)	0	0	0	0	0	0	0	1
11.1.10	lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase	1 (0.14%)	0	1	0	0	0	0	0	0
11.8.1	lipid metabolism.exotics (steroids, squalene etc).sphingolipids	1 (0.14%)	0	0	0	1	0	0	0	0
11.8.1.3	lipid metabolism.exotics (steroids, squalene etc).sphingolipids.ceramide glucosyltransferase	1 (0.14%)	0	0	0	1	0	0	0	0
16.2.1	secondary metabolism.phenylpropanoids.lignin biosynthesis	1 (0.14%)	0	0	0	0	0	0	1	0
16.2.1.1	secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL	1 (0.14%)	0	0	0	0	0	0	1	0
17.8.1	hormone metabolism.salicylic acid.synthesis-degradation	1 (0.14%)	0	0	0	0	0	0	0	1
2.1	major CHO metabolism.synthesis	1 (0.14%)	0	0	0	0	0	0	0	1
2.1.2	major CHO metabolism.synthesis.starch	1 (0.14%)	0	0	0	0	0	0	0	1
2.1.2.5	major CHO metabolism.synthesis.starch.transporter	1 (0.14%)	0	0	0	0	0	0	0	1
4	glycolysis	1 (0.14%)	0	0	0	1	0	0	0	0
6	gluconeogenesis / glyoxylate cycle	1 (0.14%)	0	0	0	0	1	0	0	0
8	TCA / org transformation	1 (0.14%)	0	0	0	1	0	0	0	0
20.1.7.6	stress.biotic.PR-proteins.proteinase inhibitors	1 (0.14%)	0	0	0	0	0	1	0	0
20.1.7.6.1	stress.biotic.PR-proteins.proteinase inhibitors.trypsin inhibitor	1 (0.14%)	0	0	0	0	0	1	0	0
20.2.3	stress.abiotic.drought/salt	1 (0.14%)	0	0	0	1	0	0	0	0
23.4.99	nucleotide metabolism.phosphotransfer and pyrophosphatases.misc	1 (0.14%)	0	0	0	0	0	0	0	1
27.3.18	RNA.regulation of transcription.E2F/DP transcription factor family	1 (0.14%)	0	1	0	0	0	0	0	0
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	1 (0.14%)	0	1	0	0	0	0	0	0
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	1 (0.14%)	0	0	0	0	1	0	0	0
27.3.50	RNA.regulation of transcription.General Transcription	1 (0.14%)	0	0	0	0	0	1	0	0
27.3.52	RNA.regulation of transcription.Global transcription factor group	1 (0.14%)	0	0	0	1	0	0	0	0
27.3.59	RNA.regulation of transcription.Methyl binding domain proteins	1 (0.14%)	0	0	0	1	0	0	0	0
27.3.63	RNA.regulation of transcription.PHD finger transcription factor	1 (0.14%)	0	1	0	0	0	0	0	0
27.3.66	RNA.regulation of transcription.Psudo ARR transcription factor family	1 (0.14%)	0	1	0	0	0	0	0	0
27.3.8	RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family	1 (0.14%)	0	0	0	0	1	0	0	0
28.1.3.2	DNA.synthesis/chromatin structure.histone.core	1 (0.14%)	0	0	0	1	0	0	0	0
28.1.3.2.3	DNA.synthesis/chromatin structure.histone.core.H3	1 (0.14%)	0	0	0	1	0	0	0	0
29.2.1.1.1.1.530	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S30A	1 (0.14%)	0	1	0	0	0	0	0	0
29.2.1.1.3.2.25	protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L25	1 (0.14%)	0	1	0	0	0	0	0	0
29.2.3	protein.synthesis.initiation	1 (0.14%)	0	0	1	0	0	0	0	0
29.3.1	protein.targeting.nucleus	1 (0.14%)	0	0	0	1	0	0	0	0
29.3.4	protein.targeting.secretory pathway	1 (0.14%)	0	0	0	1	0	0	0	0
29.3.4.99	protein.targeting.secretory pathway.unspecified	1 (0.14%)	0	0	0	1	0	0	0	0
29.5.1	protein.degradation.subtilases	1 (0.14%)	0	0	0	0	1	0	0	0
29.5.7	protein.degradation.metalloprotease	1 (0.14%)	0	0	0	0	0	1	0	0
29.5.9	protein.degradation.AAA type	1 (0.14%)	0	0	0	0	0	0	1	0
3.2	minor CHO metabolism.trehalose	1 (0.14%)	0	0	0	0	0	0	0	1
3.2.1	minor CHO metabolism.trehalose.TPS	1 (0.14%)	0	0	0	0	0	0	0	1
3.2.3	minor CHO metabolism.trehalose.potential TPS/TPP	1 (0.14%)	0	0	0	0	0	0	0	1
3.6	minor CHO metabolism.callose	1 (0.14%)	0	0	0	0	1	0	0	0
30.2.6	signalling.receptor kinases.leucine rich repeat VI	1 (0.14%)	0	0	0	0	0	0	0	1
30.2.99	signalling.receptor kinases.misc	1 (0.14%)	0	0	0	0	1	0	0	0
34.1.1	transport.p- and v-ATPases.H+-transporting two-sector ATPase	1 (0.14%)	1	0	0	0	0	0	0	0
34.1.1.1	transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit B	1 (0.14%)	1	0	0	0	0	0	0	0
34.19.1	transport.Major Intrinsic Proteins.PIP	1 (0.14%)	0	0	0	0	0	0	0	1
4.2	glycolysis.plastid branch	1 (0.14%)	0	0	0	1	0	0	0	0
4.2.8	glycolysis.plastid branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)	1 (0.14%)	0	0	0	1	0	0	0	0
6.5	gluconeogenesis / glyoxylate cycle.pyruvate dikinase	1 (0.14%)	0	0	0	0	1	0	0	0
8.1	TCA / org transformation.TCA	1 (0.14%)	0	0	0	1	0	0	0	0
9.5	mitochondrial electron transport / ATP synthesis.cytochrome c reductase	1 (0.14%)	1	0	0	0	0	0	0	0
9.6	mitochondrial electron transport / ATP synthesis.cytochrome c	1 (0.14%)	0	0	0	0	0	0	1	0
11.8	lipid metabolism.exotics(steroids, squalene etc)	1 (0.14%)	0	0	0	1	0	0	0	0
13	amino acid metabolism	1 (0.14%)	0	0	0	0	1	0	0	0
15.1	metal handling.acquisition	1 (0.14%)	1	0	0	0	0	0	0	0
16.10	secondary metabolism.simple phenols	1 (0.14%)	0	0	0	0	1	0	0	0
16.2	secondary metabolism.phenylpropanoids	1 (0.14%)	0	0	0	0	0	0	1	0
17.8	hormone metabolism.salicylic acid	1 (0.14%)	0	0	0	0	0	0	0	1
23	nucleotide metabolism	1 (0.14%)	0	0	0	0	0	0	0	1
23.4	nucleotide metabolism.phosphotransfer and pyrophosphatases	1 (0.14%)	0	0	0	0	0	0	0	1
25	C1-metabolism	1 (0.14%)	1	0	0	0	0	0	0	0
25.1	C1-metabolism.glycine hydroxymethyltransferase	1 (0.14%)	1	0	0	0	0	0	0	0
26.2	misc.UDP glucosyl and glucoronyl transferases	1 (0.14%)	0	0	0	1	0	0	0	0
26.21	misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	1 (0.14%)	0	1	0	0	0	0	0	0
26.9	misc.glutathione S transferases	1 (0.14%)	0	0	0	1	0	0	0	0
29.2	protein.synthesis	1 (0.14%)	0	0	1	0	0	0	0	0
30.11	signalling.light	1 (0.14%)	0	0	1	0	0	0	0	0
31.2	cell.division	1 (0.14%)	0	0	0	1	0	0	0	0
33.3	development.squamosa promoter binding like (SPL)	1 (0.14%)	0	0	0	0	1	0	0	0
34.11	transport.NDP-sugars at the ER	1 (0.14%)	0	1	0	0	0	0	0	0
34.13	transport.peptides and oligopeptides	1 (0.14%)	0	0	1	0	0	0	0	0
34.14	transport.unspecified cations	1 (0.14%)	0	0	0	0	1	0	0	0
34.8	transport.metabolite transporters at the envelope membrane	1 (0.14%)	0	0	0	1	0	0	0	0
34.98	transport.membrane system unknown	1 (0.14%)	0	0	0	0	0	1	0	0
8.1.1	TCA / org transformation.TCA.pyruvate DH	1 (0.14%)	0	0	0	1	0	0	0	0
8.1.1.2	TCA / org transformation.TCA.pyruvate DH.E2	1 (0.14%)	0	0	0	1	0	0	0	0
9.2.1	mitochondrial electron transport / ATP synthesis.NADH-DH.type II	1 (0.14%)	0	0	0	1	0	0	0	0
9.2.1.4	mitochondrial electron transport / ATP synthesis.NADH-DH.type II.internal matrix	1 (0.14%)	0	0	0	1	0	0	0	0
9.2.2	mitochondrial electron transport / ATP synthesis.NADH-DH.type II.external	1 (0.14%)	0	0	0	0	0	0	1	0