MapMan terms associated with a binding site

Binding site
Matrix_482
Name
AT2G25650;AT4G00270
Description
N/A
#Associated genes
747
#Associated MapMan terms
233

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MapMan Description #Associated genes ath bra cme egr gma ptr ppe sly stu vvi
27RNA112 (14.99%)180732231212017
27.3RNA.regulation of transcription95 (12.72%)1707302177015
29protein60 (8.03%)260316186306
29.4protein.postranslational modification41 (5.49%)240213103304
31cell38 (5.09%)21027111509
17hormone metabolism28 (3.75%)0401573206
30signalling23 (3.08%)1103444303
31.1cell.organisation22 (2.95%)1000471306
33development21 (2.81%)2500434003
33.99development.unspecified20 (2.68%)2500434002
26misc19 (2.54%)1101452104
28DNA18 (2.41%)0001651302
29.5.11.4.2protein.degradation.ubiquitin.E3.RING18 (2.41%)0002252304
34transport17 (2.28%)1302161201
28.1DNA.synthesis/chromatin structure15 (2.01%)0001551201
9mitochondrial electron transport / ATP synthesis14 (1.87%)1100200802
17.6hormone metabolism.gibberelin14 (1.87%)0000442103
17.6.2hormone metabolism.gibberelin.signal transduction14 (1.87%)0000442103
27.3.99RNA.regulation of transcription.unclassified13 (1.74%)1003232101
20stress10 (1.34%)1003201201
27.3.11RNA.regulation of transcription.C2H2 zinc finger family10 (1.34%)0200510002
27.3.25RNA.regulation of transcription.MYB domain transcription factor family10 (1.34%)0200420200
29.4.1protein.postranslational modification.kinase10 (1.34%)0101511001
29.4.1.57protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII10 (1.34%)0101511001
9.1mitochondrial electron transport / ATP synthesis.NADH-DH9 (1.20%)1100100402
11lipid metabolism9 (1.20%)0003311001
30.2signalling.receptor kinases9 (1.20%)0001122201
9.1.2mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear9 (1.20%)1100100402
23nucleotide metabolism8 (1.07%)0100400102
27.1RNA.processing8 (1.07%)0000213002
27.2RNA.transcription8 (1.07%)0100011500
29.3protein.targeting8 (1.07%)0100311002
30.3signalling.calcium8 (1.07%)0001211102
31.4cell.vesicle transport8 (1.07%)1101030101
16secondary metabolism7 (0.94%)0102120001
27.3.3RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family7 (0.94%)0000321100
1PS6 (0.80%)0100100202
27.1.2RNA.processing.RNA helicase6 (0.80%)0000212001
27.3.30RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family6 (0.80%)0101201100
27.3.32RNA.regulation of transcription.WRKY domain transcription factor family6 (0.80%)0200201001
29.2protein.synthesis6 (0.80%)0100050000
1.1PS.lightreaction5 (0.67%)0100100201
2major CHO metabolism5 (0.67%)0000302000
2.2major CHO metabolism.degradation5 (0.67%)0000302000
16.2secondary metabolism.phenylpropanoids5 (0.67%)0102110000
20.1stress.biotic5 (0.67%)1002000101
20.2stress.abiotic5 (0.67%)0001201100
27.3.6RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family5 (0.67%)0000310001
29.5.11.4.5.2protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ5 (0.67%)0001011002
30.2.11signalling.receptor kinases.leucine rich repeat XI5 (0.67%)0000111101
31.2cell.division5 (0.67%)0000310100
11.9lipid metabolism.lipid degradation4 (0.54%)0001200001
17.2hormone metabolism.auxin4 (0.54%)0101010001
17.2.3hormone metabolism.auxin.induced-regulated-responsive-activated4 (0.54%)0101010001
17.5hormone metabolism.ethylene4 (0.54%)0200000101
17.5.2hormone metabolism.ethylene.signal transduction4 (0.54%)0200000101
23.1nucleotide metabolism.synthesis4 (0.54%)0100200100
27.3.22RNA.regulation of transcription.HB,Homeobox transcription factor family4 (0.54%)0000101101
28.1.3DNA.synthesis/chromatin structure.histone4 (0.54%)0001101001
29.3.4protein.targeting.secretory pathway4 (0.54%)0000201001
29.3.4.99protein.targeting.secretory pathway.unspecified4 (0.54%)0000201001
10cell wall3 (0.40%)0000120000
11.3lipid metabolism.Phospholipid synthesis3 (0.40%)0001101000
11.9.3lipid metabolism.lipid degradation.lysophospholipases3 (0.40%)0001100001
14S-assimilation3 (0.40%)0000000102
14.2S-assimilation.APR3 (0.40%)0000000102
16.2.1secondary metabolism.phenylpropanoids.lignin biosynthesis3 (0.40%)0002100000
19.11tetrapyrrole synthesis.magnesium protoporphyrin IX methyltransferase3 (0.40%)0000120000
2.2.2major CHO metabolism.degradation.starch3 (0.40%)0000102000
2.2.2.1major CHO metabolism.degradation.starch.starch cleavage3 (0.40%)0000102000
2.2.2.1.2major CHO metabolism.degradation.starch.starch cleavage.beta amylase3 (0.40%)0000102000
19tetrapyrrole synthesis3 (0.40%)0000120000
23.1.2nucleotide metabolism.synthesis.purine3 (0.40%)0100100100
9.7mitochondrial electron transport / ATP synthesis.cytochrome c oxidase3 (0.40%)0000000300
26.7misc.oxidases - copper, flavone etc3 (0.40%)0000120000
27.3.16RNA.regulation of transcription.CCAAT box binding factor family, HAP53 (0.40%)0000020001
27.3.20RNA.regulation of transcription.G2-like transcription factor family, GARP3 (0.40%)0001100001
27.3.46RNA.regulation of transcription.DNA methyltransferases3 (0.40%)0001100001
27.3.57RNA.regulation of transcription.JUMONJI family3 (0.40%)0000010002
27.3.67RNA.regulation of transcription.putative transcription regulator3 (0.40%)0000110100
27.3.68RNA.regulation of transcription.PWWP domain protein3 (0.40%)0000111000
29.5protein.degradation3 (0.40%)0000012000
30.11signalling.light3 (0.40%)0101001000
30.2.17signalling.receptor kinases.DUF 263 (0.40%)0001001100
31.3cell.cycle3 (0.40%)0001000002
34.7transport.phosphate3 (0.40%)1100010000
1.1.40PS.lightreaction.cyclic electron flow-chlororespiration2 (0.27%)0000000101
10.2cell wall.cellulose synthesis2 (0.27%)0000110000
11.9.3.2lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase2 (0.27%)0001100000
16.2.1.3secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL2 (0.27%)0002000000
17.4hormone metabolism.cytokinin2 (0.27%)0000110000
17.7hormone metabolism.jasmonate2 (0.27%)0000010001
17.7.1hormone metabolism.jasmonate.synthesis-degradation2 (0.27%)0000010001
2.2.1major CHO metabolism.degradation.sucrose2 (0.27%)0000200000
2.2.1.4major CHO metabolism.degradation.sucrose.hexokinase2 (0.27%)0000200000
20.2.4stress.abiotic.touch/wounding2 (0.27%)0000200000
21redox2 (0.27%)0001001000
21.2redox.ascorbate and glutathione2 (0.27%)0001001000
21.2.1redox.ascorbate and glutathione.ascorbate2 (0.27%)0001001000
21.2.1.2redox.ascorbate and glutathione.ascorbate.GDP-L-galactose-hexose-1-phosphate guanyltransferase2 (0.27%)0001001000
23.1.2.3nucleotide metabolism.synthesis.purine.GAR transformylase2 (0.27%)0100000100
23.4nucleotide metabolism.phosphotransfer and pyrophosphatases2 (0.27%)0000100001
23.4.99nucleotide metabolism.phosphotransfer and pyrophosphatases.misc2 (0.27%)0000100001
26.12misc.peroxidases2 (0.27%)0000200000
26.2misc.UDP glucosyl and glucoronyl transferases2 (0.27%)0000101000
26.24misc.GCN5-related N-acetyltransferase2 (0.27%)0000000101
26.3misc.gluco-, galacto- and mannosidases2 (0.27%)0000010001
26.8misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases2 (0.27%)0000010001
27.3.1RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family2 (0.27%)0000200000
27.3.4RNA.regulation of transcription.ARF, Auxin Response Factor family2 (0.27%)0000200000
28.1.1DNA.synthesis/chromatin structure.retrotransposon/transposase2 (0.27%)0000000200
28.1.1.4DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase2 (0.27%)0000000200
28.2DNA.repair2 (0.27%)0000100001
29.2.1.1.1.2.1protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L12 (0.27%)0001000001
29.2.1.2.1.6protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S62 (0.27%)0001001000
29.2.1.2.2.22protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L222 (0.27%)0000010100
29.2.2protein.synthesis.ribosome biogenesis2 (0.27%)0100010000
29.2.3protein.synthesis.initiation2 (0.27%)0000020000
29.2.4protein.synthesis.elongation2 (0.27%)0000020000
29.3.2protein.targeting.mitochondria2 (0.27%)0000110000
29.3.3protein.targeting.chloroplast2 (0.27%)0100000001
29.5.11protein.degradation.ubiquitin2 (0.27%)0000011000
29.5.11.4.1protein.degradation.ubiquitin.E3.HECT2 (0.27%)0002000000
29.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX2 (0.27%)0200000000
30.4signalling.phosphinositides2 (0.27%)1000100000
34.2transport.sugars2 (0.27%)0001010000
34.99transport.misc2 (0.27%)0000001100
1.1.1PS.lightreaction.photosystem II1 (0.13%)0100000000
1.1.1.2PS.lightreaction.photosystem II.PSII polypeptide subunits1 (0.13%)0100000000
1.1.3PS.lightreaction.cytochrome b6/f1 (0.13%)0000100000
1.1.3.3PS.lightreaction.cytochrome b6/f.cytochrome b6 (CYB6)1 (0.13%)0000100000
1.1.4PS.lightreaction.ATP synthase1 (0.13%)0000000100
1.1.4.5PS.lightreaction.ATP synthase.subunit C1 (0.13%)0000000100
1.3PS.calvin cycle1 (0.13%)0000000001
1.3.7PS.calvin cycle.FBPase1 (0.13%)0000000001
3minor CHO metabolism1 (0.13%)0100000000
4glycolysis1 (0.13%)0000100000
8TCA / org transformation1 (0.13%)1000000000
10.2.1cell wall.cellulose synthesis.cellulose synthase1 (0.13%)0000010000
10.2.2cell wall.cellulose synthesis.COBRA1 (0.13%)0000100000
10.7cell wall.modification1 (0.13%)0000010000
11.10lipid metabolism.glycolipid synthesis1 (0.13%)0001000000
11.10.1lipid metabolism.glycolipid synthesis.MGDG synthase1 (0.13%)0001000000
11.8lipid metabolism.exotics(steroids, squalene etc)1 (0.13%)0000010000
11.8.3lipid metabolism.exotics (steroids, squalene etc).UDP-glucose:sterol glucosyltransferase1 (0.13%)0000010000
11.9.2lipid metabolism.lipid degradation.lipases1 (0.13%)0000100000
11.9.2.1lipid metabolism.lipid degradation.lipases.triacylglycerol lipase1 (0.13%)0000100000
11.9.3.3lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase1 (0.13%)0000000001
13amino acid metabolism1 (0.13%)0000100000
13.1amino acid metabolism.synthesis1 (0.13%)0000100000
13.1.3amino acid metabolism.synthesis.aspartate family1 (0.13%)0000100000
13.1.3.4amino acid metabolism.synthesis.aspartate family.methionine1 (0.13%)0000100000
15metal handling1 (0.13%)0000100000
15.2metal handling.binding, chelation and storage1 (0.13%)0000100000
16.2.1.6secondary metabolism.phenylpropanoids.lignin biosynthesis.CCoAOMT1 (0.13%)0000100000
16.7secondary metabolism.wax1 (0.13%)0000010000
16.99secondary metabolism.unspecified1 (0.13%)0000000001
17.1hormone metabolism.abscisic acid1 (0.13%)0100000000
17.1.1hormone metabolism.abscisic acid.synthesis-degradation1 (0.13%)0100000000
17.4.1hormone metabolism.cytokinin.synthesis-degradation1 (0.13%)0000010000
17.4.2hormone metabolism.cytokinin.signal transduction1 (0.13%)0000100000
17.7.1.10hormone metabolism.jasmonate.synthesis-degradation.jasmonate-O-methyltransferase1 (0.13%)0000000001
17.7.1.4hormone metabolism.jasmonate.synthesis-degradation.allene oxidase cyclase1 (0.13%)0000010000
17.8hormone metabolism.salicylic acid1 (0.13%)0000001000
17.8.1hormone metabolism.salicylic acid.synthesis-degradation1 (0.13%)0000001000
20.1.7stress.biotic.PR-proteins1 (0.13%)0001000000
20.2.1stress.abiotic.heat1 (0.13%)0000000100
20.2.99stress.abiotic.unspecified1 (0.13%)0001000000
23.1.1nucleotide metabolism.synthesis.pyrimidine1 (0.13%)0000100000
23.1.1.10nucleotide metabolism.synthesis.pyrimidine.CTP synthetase1 (0.13%)0000100000
23.1.2.5nucleotide metabolism.synthesis.purine.AIR synthase1 (0.13%)0000100000
23.2nucleotide metabolism.degradation1 (0.13%)0000000001
23.3nucleotide metabolism.salvage1 (0.13%)0000100000
23.3.3nucleotide metabolism.salvage.NUDIX hydrolases1 (0.13%)0000100000
24Biodegradation of Xenobiotics1 (0.13%)0000000100
26.10misc.cytochrome P4501 (0.13%)0100000000
26.13misc.acid and other phosphatases1 (0.13%)0000000001
26.18misc.invertase/pectin methylesterase inhibitor family protein1 (0.13%)0000010000
26.22misc.short chain dehydrogenase/reductase (SDR)1 (0.13%)0000001000
26.28misc.GDSL-motif lipase1 (0.13%)0001000000
26.4misc.beta 1,3 glucan hydrolases1 (0.13%)1000000000
27.3.12RNA.regulation of transcription.C3H zinc finger family1 (0.13%)0000000001
27.3.18RNA.regulation of transcription.E2F/DP transcription factor family1 (0.13%)0001000000
27.3.21RNA.regulation of transcription.GRAS transcription factor family1 (0.13%)0000010000
27.3.23RNA.regulation of transcription.HSF,Heat-shock transcription factor family1 (0.13%)0000010000
27.3.24RNA.regulation of transcription.MADS box transcription factor family1 (0.13%)0000010000
27.3.29RNA.regulation of transcription.TCP transcription factor family1 (0.13%)0000010000
27.3.37RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family1 (0.13%)0000000001
27.3.40RNA.regulation of transcription.Aux/IAA family1 (0.13%)0000010000
27.3.69RNA.regulation of transcription.SET-domain transcriptional regulator family1 (0.13%)0000000001
27.3.9RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family1 (0.13%)0000010000
27.4RNA.RNA binding1 (0.13%)0000001000
28.99DNA.unspecified1 (0.13%)0000000100
29.2.1.1.1.2.20protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L201 (0.13%)0100000000
29.2.1.1.2.1.3protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S31 (0.13%)0000000100
29.2.1.1.3.2.4protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L41 (0.13%)0001000000
29.2.1.2.2.30protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L301 (0.13%)0000001000
29.2.1.2.2.32protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L321 (0.13%)0000000001
29.2.1.2.2.5protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L51 (0.13%)0000100000
29.2.1.2.2.510protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10A1 (0.13%)0000100000
29.2.1.2.2.523protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23A1 (0.13%)0000001000
29.2.2.3protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications1 (0.13%)0000010000
29.2.2.3.4protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.WD-repeat proteins1 (0.13%)0000010000
29.2.2.50protein.synthesis.ribosome biogenesis.BRIX1 (0.13%)0100000000
29.5.11.2protein.degradation.ubiquitin.E11 (0.13%)0000010000
29.5.4protein.degradation.aspartate protease1 (0.13%)0000001000
3.5minor CHO metabolism.others1 (0.13%)0100000000
29.6protein.folding1 (0.13%)0001000000
29.7protein.glycosylation1 (0.13%)0000010000
30.2.3signalling.receptor kinases.leucine rich repeat III1 (0.13%)0000010000
30.4.1signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase1 (0.13%)0000100000
30.5signalling.G-proteins1 (0.13%)0000010000
31.3.1cell.cycle.peptidylprolyl isomerase1 (0.13%)0000000001
33.3development.squamosa promoter binding like (SPL)1 (0.13%)0000000001
34.12transport.metal1 (0.13%)0000010000
34.14transport.unspecified cations1 (0.13%)0001000000
34.15transport.potassium1 (0.13%)0000100000
34.16transport.ABC transporters and multidrug resistance systems1 (0.13%)0100000000
34.18transport.unspecified anions1 (0.13%)0000010000
34.19transport.Major Intrinsic Proteins1 (0.13%)0000010000
34.19.2transport.Major Intrinsic Proteins.TIP1 (0.13%)0000010000
4.2glycolysis.plastid branch1 (0.13%)0000100000
8.2TCA / org transformation.other organic acid transformations1 (0.13%)1000000000
9.6mitochondrial electron transport / ATP synthesis.cytochrome c1 (0.13%)0000000100
9.9mitochondrial electron transport / ATP synthesis.F1-ATPase1 (0.13%)0000100000
34.20transport.porins1 (0.13%)0001000000
34.22transport.cyclic nucleotide or calcium regulated channels1 (0.13%)0100000000
34.23transport.hormones1 (0.13%)0000010000
34.23.1transport.hormones.auxin1 (0.13%)0000010000
34.6transport.sulphate1 (0.13%)0000000100
34.9transport.metabolite transporters at the mitochondrial membrane1 (0.13%)0000000001
4.2.4glycolysis.plastid branch.phosphofructokinase (PFK)1 (0.13%)0000100000
8.2.10TCA / org transformation.other organic acid transformatons.malic1 (0.13%)1000000000