MapMan terms associated with a binding site

Binding site
Matrix_477
Name
RAV1
Description
N/A
#Associated genes
876
#Associated MapMan terms
256

Click table-header(s) to enable sorting
MapMan Description #Associated genes ath bra cme egr gma ptr ppe sly stu vvi
27RNA183 (20.89%)5100855512012022
27.3RNA.regulation of transcription158 (18.04%)48064845189020
29protein82 (9.36%)2203252177015
29.4protein.postranslational modification48 (5.48%)220215115407
30signalling42 (4.79%)100115103408
31cell36 (4.11%)11011491405
33development30 (3.42%)13018112004
26misc29 (3.31%)13015100108
33.99development.unspecified26 (2.97%)1301891003
34transport26 (2.97%)0104683103
29.5protein.degradation24 (2.74%)0001862205
31.1cell.organisation23 (2.63%)10001050304
17hormone metabolism19 (2.17%)1200714202
1PS18 (2.05%)1002432204
1.1PS.lightreaction15 (1.71%)0001332204
27.1RNA.processing14 (1.60%)1201512200
27.3.32RNA.regulation of transcription.WRKY domain transcription factor family13 (1.48%)0102341002
28DNA12 (1.37%)2000350101
10cell wall11 (1.26%)1000510103
27.3.22RNA.regulation of transcription.HB,Homeobox transcription factor family11 (1.26%)0000542000
27.3.29RNA.regulation of transcription.TCP transcription factor family11 (1.26%)0000331103
27.3.35RNA.regulation of transcription.bZIP transcription factor family11 (1.26%)0000234200
27.3.67RNA.regulation of transcription.putative transcription regulator11 (1.26%)1001230301
27.3.7RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family11 (1.26%)1401121001
27.4RNA.RNA binding11 (1.26%)0001250102
29.5.11protein.degradation.ubiquitin11 (1.26%)0000512102
30.2signalling.receptor kinases11 (1.26%)0001421201
3minor CHO metabolism10 (1.14%)0001320202
28.1DNA.synthesis/chromatin structure10 (1.14%)2000330101
29.5.11.4.2protein.degradation.ubiquitin.E3.RING10 (1.14%)1000132102
29.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX10 (1.14%)0200411200
30.3signalling.calcium10 (1.14%)1000511002
30.5signalling.G-proteins10 (1.14%)0000241003
26.2misc.UDP glucosyl and glucoronyl transferases9 (1.03%)1000230102
27.1.2RNA.processing.RNA helicase9 (1.03%)1200212100
27.3.37RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family9 (1.03%)0000710100
30.2.11signalling.receptor kinases.leucine rich repeat XI9 (1.03%)0001410201
3.6minor CHO metabolism.callose8 (0.91%)0001310102
11lipid metabolism8 (0.91%)0000330101
17.5hormone metabolism.ethylene8 (0.91%)1200301100
20stress8 (0.91%)1100301002
27.3.3RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family8 (0.91%)1000151000
27.3.99RNA.regulation of transcription.unclassified8 (0.91%)0000231002
29.4.1protein.postranslational modification.kinase8 (0.91%)0001320200
30.11signalling.light8 (0.91%)0000410102
17.2hormone metabolism.auxin7 (0.80%)0000311002
18Co-factor and vitamine metabolism7 (0.80%)0000230002
21redox7 (0.80%)1001210002
29.4.1.57protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII7 (0.80%)0001320100
34.2transport.sugars7 (0.80%)0100131001
17.2.3hormone metabolism.auxin.induced-regulated-responsive-activated6 (0.68%)0000311001
17.5.3hormone metabolism.ethylene.induced-regulated-responsive-activated6 (0.68%)1100301000
27.3.11RNA.regulation of transcription.C2H2 zinc finger family6 (0.68%)0001212000
29.3protein.targeting6 (0.68%)0000230001
34.9transport.metabolite transporters at the mitochondrial membrane6 (0.68%)0002111100
1.1.3PS.lightreaction.cytochrome b6/f5 (0.57%)0000300101
16secondary metabolism5 (0.57%)0000130001
23nucleotide metabolism5 (0.57%)0000310001
27.3.21RNA.regulation of transcription.GRAS transcription factor family5 (0.57%)0000130001
27.3.4RNA.regulation of transcription.ARF, Auxin Response Factor family5 (0.57%)0000220001
27.3.6RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family5 (0.57%)0000201200
27.3.8RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family5 (0.57%)0100201001
29.3.1protein.targeting.nucleus5 (0.57%)0000230000
29.5.11.5protein.degradation.ubiquitin.ubiquitin protease5 (0.57%)0000111101
31.2cell.division5 (0.57%)0000210101
31.4cell.vesicle transport5 (0.57%)0101021000
9mitochondrial electron transport / ATP synthesis4 (0.46%)1100100100
10.6.3cell wall.degradation.pectate lyases and polygalacturonases4 (0.46%)0000200101
11.1.7lipid metabolism.FA synthesis and FA elongation.ACP thioesterase4 (0.46%)0000130000
9.1mitochondrial electron transport / ATP synthesis.NADH-DH4 (0.46%)1100100100
10.6cell wall.degradation4 (0.46%)0000200101
11.1lipid metabolism.FA synthesis and FA elongation4 (0.46%)0000130000
20.1stress.biotic4 (0.46%)1000101001
20.2stress.abiotic4 (0.46%)0100200001
20.2.1stress.abiotic.heat4 (0.46%)0100200001
21.2redox.ascorbate and glutathione4 (0.46%)0001100002
26.4misc.beta 1,3 glucan hydrolases4 (0.46%)0000210001
27.1.1RNA.processing.splicing4 (0.46%)0000300100
27.3.24RNA.regulation of transcription.MADS box transcription factor family4 (0.46%)0001000003
27.3.25RNA.regulation of transcription.MYB domain transcription factor family4 (0.46%)0100120000
27.3.64RNA.regulation of transcription.PHOR14 (0.46%)0000111001
34.16transport.ABC transporters and multidrug resistance systems4 (0.46%)0002110000
9.1.2mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear4 (0.46%)1100100100
1.1.3.3PS.lightreaction.cytochrome b6/f.cytochrome b6 (CYB6)3 (0.34%)0000200100
1.1.40PS.lightreaction.cyclic electron flow-chlororespiration3 (0.34%)0000000102
1.1.5PS.lightreaction.other electron carrier (ox/red)3 (0.34%)0000020001
1.1.5.2PS.lightreaction.other electron carrier (ox/red).ferredoxin3 (0.34%)0000020001
10.3cell wall.hemicellulose synthesis3 (0.34%)1000110000
13amino acid metabolism3 (0.34%)0000020001
16.10secondary metabolism.simple phenols3 (0.34%)0000030000
18.2Co-factor and vitamine metabolism.thiamine3 (0.34%)0000200001
23.1nucleotide metabolism.synthesis3 (0.34%)0000110001
23.1.3nucleotide metabolism.synthesis.PRS-PP3 (0.34%)0000110001
25C1-metabolism3 (0.34%)0100011000
26.10misc.cytochrome P4503 (0.34%)0100000002
26.22misc.short chain dehydrogenase/reductase (SDR)3 (0.34%)0000020001
26.7misc.oxidases - copper, flavone etc3 (0.34%)0000120000
27.3.20RNA.regulation of transcription.G2-like transcription factor family, GARP3 (0.34%)0000120000
27.3.23RNA.regulation of transcription.HSF,Heat-shock transcription factor family3 (0.34%)0000010002
27.3.40RNA.regulation of transcription.Aux/IAA family3 (0.34%)0000120000
27.3.57RNA.regulation of transcription.JUMONJI family3 (0.34%)0000200001
29.2protein.synthesis3 (0.34%)0000010101
29.2.1.1.2.1.29protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S293 (0.34%)0000111000
29.5.11.4.5.2protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ3 (0.34%)0300000000
31.3cell.cycle3 (0.34%)0000210000
34.99transport.misc3 (0.34%)0000110001
1.1.1PS.lightreaction.photosystem II2 (0.23%)0001010000
1.3PS.calvin cycle2 (0.23%)1001000000
1.3.6PS.calvin cycle.aldolase2 (0.23%)1001000000
2major CHO metabolism2 (0.23%)0001000001
17.5.1hormone metabolism.ethylene.synthesis-degradation2 (0.23%)0100000100
18.3.1Co-factor and vitamine metabolism.riboflavin.GTP cyclohydrolase II2 (0.23%)0000020000
18.4.2Co-factor and vitamine metabolism.pantothenate.3-methyl-2-oxobutanoate hydroxymethyltransferase (KPHMT,PANB)2 (0.23%)0000010001
2.1major CHO metabolism.synthesis2 (0.23%)0001000001
7OPP2 (0.23%)1000010000
10.7cell wall.modification2 (0.23%)0000100001
11.9lipid metabolism.lipid degradation2 (0.23%)0000000101
13.1amino acid metabolism.synthesis2 (0.23%)0000010001
18.3Co-factor and vitamine metabolism.riboflavin2 (0.23%)0000020000
18.4Co-factor and vitamine metabolism.pantothenate2 (0.23%)0000010001
2.1.2major CHO metabolism.synthesis.starch2 (0.23%)0001000001
2.1.2.2major CHO metabolism.synthesis.starch.starch synthase2 (0.23%)0001000001
20.1.7stress.biotic.PR-proteins2 (0.23%)1000001000
21.2.1redox.ascorbate and glutathione.ascorbate2 (0.23%)0000100001
21.4redox.glutaredoxins2 (0.23%)1000100000
26.1misc.misc22 (0.23%)0001000001
26.13misc.acid and other phosphatases2 (0.23%)0100010000
27.3.30RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family2 (0.23%)0000001001
29.2.1.2.2.3protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L32 (0.23%)0001100000
29.2.3protein.synthesis.initiation2 (0.23%)0000010001
29.5.11.20protein.degradation.ubiquitin.proteasom2 (0.23%)0000101000
29.5.11.3protein.degradation.ubiquitin.E22 (0.23%)0000200000
29.5.5protein.degradation.serine protease2 (0.23%)0000010001
30.2.3signalling.receptor kinases.leucine rich repeat III2 (0.23%)0000101000
30.4signalling.phosphinositides2 (0.23%)0000020000
30.4.1signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase2 (0.23%)0000020000
33.2development.late embryogenesis abundant2 (0.23%)0000020000
34.15transport.potassium2 (0.23%)0000001001
34.19transport.Major Intrinsic Proteins2 (0.23%)0000110000
1.1.1.1PS.lightreaction.photosystem II.LHC-II1 (0.11%)0001000000
1.1.1.2PS.lightreaction.photosystem II.PSII polypeptide subunits1 (0.11%)0000010000
1.1.2PS.lightreaction.photosystem I1 (0.11%)0000001000
1.1.2.2PS.lightreaction.photosystem I.PSI polypeptide subunits1 (0.11%)0000001000
1.1.3.4PS.lightreaction.cytochrome b6/f.apocytochrome f (CYF)1 (0.11%)0000100000
1.1.4PS.lightreaction.ATP synthase1 (0.11%)0000001000
1.1.4.4PS.lightreaction.ATP synthase.gamma chain1 (0.11%)0000001000
1.2PS.photorespiration1 (0.11%)0000100000
1.2.3PS.photorespiration.aminotransferases peroxisomal1 (0.11%)0000100000
10.2cell wall.cellulose synthesis1 (0.11%)0000000001
10.5cell wall.cell wall proteins1 (0.11%)0000100000
10.5.4cell wall.cell wall proteins.HRGP1 (0.11%)0000100000
11.3lipid metabolism.Phospholipid synthesis1 (0.11%)0000100000
11.3.5lipid metabolism.Phospholipid synthesis.diacylglycerol kinase1 (0.11%)0000100000
11.8lipid metabolism.exotics(steroids, squalene etc)1 (0.11%)0000100000
11.8.1lipid metabolism.exotics (steroids, squalene etc).sphingolipids1 (0.11%)0000100000
11.8.1.2lipid metabolism.exotics (steroids, squalene etc).sphingolipids.serine C-palmitoyltransferase1 (0.11%)0000100000
11.9.2lipid metabolism.lipid degradation.lipases1 (0.11%)0000000001
11.9.3lipid metabolism.lipid degradation.lysophospholipases1 (0.11%)0000000100
11.9.3.2lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase1 (0.11%)0000000100
12N-metabolism1 (0.11%)0000000100
12.2N-metabolism.ammonia metabolism1 (0.11%)0000000100
12.2.1N-metabolism.ammonia metabolism.glutamate synthase1 (0.11%)0000000100
13.1.1.3.11amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine-glyoxylate aminotransferase1 (0.11%)0000100000
13.1.3amino acid metabolism.synthesis.aspartate family1 (0.11%)0000000001
13.1.3.5amino acid metabolism.synthesis.aspartate family.lysine1 (0.11%)0000000001
13.1.5amino acid metabolism.synthesis.serine-glycine-cysteine group1 (0.11%)0000010000
13.1.5.3amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine1 (0.11%)0000010000
13.1.5.3.1amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.OASTL1 (0.11%)0000010000
13.99amino acid metabolism.misc1 (0.11%)0000010000
14S-assimilation1 (0.11%)0000100000
14.2S-assimilation.APR1 (0.11%)0000100000
15metal handling1 (0.11%)0000010000
15.2metal handling.binding, chelation and storage1 (0.11%)0000010000
16.1secondary metabolism.isoprenoids1 (0.11%)0000000001
16.1.4secondary metabolism.isoprenoids.carotenoids1 (0.11%)0000000001
16.1.4.4secondary metabolism.isoprenoids.carotenoids.lycopene epsilon cyclase1 (0.11%)0000000001
16.8secondary metabolism.flavonoids1 (0.11%)0000100000
16.8.1secondary metabolism.flavonoids.anthocyanins1 (0.11%)0000100000
16.8.1.21secondary metabolism.flavonoids.anthocyanins.anthocyanin 5-aromatic acyltransferase1 (0.11%)0000100000
17.1hormone metabolism.abscisic acid1 (0.11%)0000000100
17.1.1hormone metabolism.abscisic acid.synthesis-degradation1 (0.11%)0000000100
17.1.1.1hormone metabolism.abscisic acid.synthesis-degradation.synthesis1 (0.11%)0000000100
17.1.1.1.1hormone metabolism.abscisic acid.synthesis-degradation.synthesis.zeaxanthin epoxidase1 (0.11%)0000000100
17.1.1.1.10hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase1 (0.11%)0000010000
17.2.2hormone metabolism.auxin.signal transduction1 (0.11%)0000000001
17.3hormone metabolism.brassinosteroid1 (0.11%)0000001000
17.3.2hormone metabolism.brassinosteroid.signal transduction1 (0.11%)0000001000
17.3.2.2hormone metabolism.brassinosteroid.signal transduction.BZR1 (0.11%)0000001000
17.4hormone metabolism.cytokinin1 (0.11%)0000100000
17.4.2hormone metabolism.cytokinin.signal transduction1 (0.11%)0000100000
17.6hormone metabolism.gibberelin1 (0.11%)0000001000
17.6.3hormone metabolism.gibberelin.induced-regulated-responsive-activated1 (0.11%)0000001000
19tetrapyrrole synthesis1 (0.11%)0000000001
19.1tetrapyrrole synthesis.glu-tRNA synthetase1 (0.11%)0000000001
20.1.3stress.biotic.signalling1 (0.11%)0000100000
20.1.3.1stress.biotic.signalling.MLO-like1 (0.11%)0000100000
21.1redox.thioredoxin1 (0.11%)0000010000
22polyamine metabolism1 (0.11%)0000000001
22.1polyamine metabolism.synthesis1 (0.11%)0000000001
22.1.2polyamine metabolism.synthesis.SAM decarboxylase1 (0.11%)0000000001
23.3nucleotide metabolism.salvage1 (0.11%)0000100000
23.3.3nucleotide metabolism.salvage.NUDIX hydrolases1 (0.11%)0000100000
23.5nucleotide metabolism.deoxynucleotide metabolism1 (0.11%)0000100000
23.5.4nucleotide metabolism.deoxynucleotide metabolism.ribonucleoside-diphosphate reductase1 (0.11%)0000100000
24Biodegradation of Xenobiotics1 (0.11%)0000000100
26.12misc.peroxidases1 (0.11%)0000010000
26.14misc.oxygenases1 (0.11%)0000010000
26.28misc.GDSL-motif lipase1 (0.11%)0000000001
26.8misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases1 (0.11%)0100000000
27.1.19RNA.processing.ribonucleases1 (0.11%)0001000000
27.3.14RNA.regulation of transcription.CCAAT box binding factor family, HAP21 (0.11%)0000100000
27.3.2RNA.regulation of transcription.Alfin-like1 (0.11%)0000100000
27.3.26RNA.regulation of transcription.MYB-related transcription factor family1 (0.11%)0000100000
27.3.41RNA.regulation of transcription.B3 transcription factor family1 (0.11%)0100000000
27.3.44RNA.regulation of transcription.Chromatin Remodeling Factors1 (0.11%)0000001000
27.3.52RNA.regulation of transcription.Global transcription factor group1 (0.11%)0000010000
27.3.59RNA.regulation of transcription.Methyl binding domain proteins1 (0.11%)0000100000
27.3.62RNA.regulation of transcription.Nucleosome/chromatin assembly factor group1 (0.11%)0000100000
27.3.63RNA.regulation of transcription.PHD finger transcription factor1 (0.11%)0000100000
27.3.69RNA.regulation of transcription.SET-domain transcriptional regulator family1 (0.11%)0000010000
27.3.80RNA.regulation of transcription.zf-HD1 (0.11%)1000000000
27.3.9RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family1 (0.11%)0000100000
28.1.1DNA.synthesis/chromatin structure.retrotransposon/transposase1 (0.11%)0000100000
28.1.1.4DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase1 (0.11%)0000100000
28.1.3DNA.synthesis/chromatin structure.histone1 (0.11%)0000100000
28.1.3.2DNA.synthesis/chromatin structure.histone.core1 (0.11%)0000100000
28.1.3.2.3DNA.synthesis/chromatin structure.histone.core.H31 (0.11%)0000100000
28.2DNA.repair1 (0.11%)0000010000
28.99DNA.unspecified1 (0.11%)0000010000
29.2.1.1.2.1.14protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S141 (0.11%)0000000100
29.2.1.2.2.141protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L4/L11 (0.11%)0000000001
29.2.1.2.2.7protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L71 (0.11%)1000000000
29.3.4protein.targeting.secretory pathway1 (0.11%)0000000001
29.3.4.99protein.targeting.secretory pathway.unspecified1 (0.11%)0000000001
29.4.1.59protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX1 (0.11%)0000000100
29.5.1protein.degradation.subtilases1 (0.11%)0000100000
29.5.2protein.degradation.autophagy1 (0.11%)0000010000
29.5.7protein.degradation.metalloprotease1 (0.11%)0000000001
29.5.9protein.degradation.AAA type1 (0.11%)0000010000
3.1minor CHO metabolism.raffinose family1 (0.11%)0000010000
29.6protein.folding1 (0.11%)0000000001
3.1.1minor CHO metabolism.raffinose family.galactinol synthases1 (0.11%)0000010000
3.1.1.2minor CHO metabolism.raffinose family.galactinol synthases.putative1 (0.11%)0000010000
3.2minor CHO metabolism.trehalose1 (0.11%)0000000100
3.2.2minor CHO metabolism.trehalose.TPP1 (0.11%)0000000100
30.2.25signalling.receptor kinases.wall associated kinase1 (0.11%)0000010000
7.2OPP.non-reductive PP1 (0.11%)0000010000
30.6signalling.MAP kinases1 (0.11%)0000000100
33.1development.storage proteins1 (0.11%)0000001000
33.3development.squamosa promoter binding like (SPL)1 (0.11%)0000000001
34.1transport.p- and v-ATPases1 (0.11%)0000010000
34.12transport.metal1 (0.11%)0000100000
34.19.1transport.Major Intrinsic Proteins.PIP1 (0.11%)0000010000
34.19.2transport.Major Intrinsic Proteins.TIP1 (0.11%)0000100000
7.2.2OPP.non-reductive PP.transaldolase1 (0.11%)0000010000
7.3OPP.electron transfer1 (0.11%)1000000000