PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_447
Name: RVE1
Description: N/A

#Associated genes: 199
#Associated MapMan terms: 108

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	36 (18.09%)	4	4	5	7	10	5	1	0
27.3	RNA.regulation of transcription	25 (12.56%)	3	4	2	5	9	1	1	0
29	protein	19 (9.55%)	0	3	0	5	5	4	2	0
30	signalling	13 (6.53%)	1	1	1	2	4	0	3	1
34	transport	11 (5.53%)	0	0	0	5	4	0	2	0
33	development	8 (4.02%)	1	1	1	3	0	2	0	0
33.99	development.unspecified	8 (4.02%)	1	1	1	3	0	2	0	0
28	DNA	7 (3.52%)	2	0	2	1	1	0	1	0
28.1	DNA.synthesis/chromatin structure	7 (3.52%)	2	0	2	1	1	0	1	0
29.4	protein.postranslational modification	7 (3.52%)	0	1	0	1	2	1	2	0
26	misc	6 (3.02%)	1	1	0	3	1	0	0	0
30.3	signalling.calcium	6 (3.02%)	1	0	1	1	1	0	1	1
16	secondary metabolism	5 (2.51%)	0	1	0	0	3	0	1	0
27.1	RNA.processing	5 (2.51%)	1	0	0	1	1	2	0	0
10	cell wall	4 (2.01%)	1	0	0	2	1	0	0	0
17	hormone metabolism	4 (2.01%)	0	0	1	0	1	2	0	0
27.2	RNA.transcription	4 (2.01%)	0	0	3	0	0	1	0	0
27.3.44	RNA.regulation of transcription.Chromatin Remodeling Factors	4 (2.01%)	1	0	0	1	2	0	0	0
29.3	protein.targeting	4 (2.01%)	0	0	0	1	1	2	0	0
29.4.1	protein.postranslational modification.kinase	4 (2.01%)	0	0	0	1	0	1	2	0
30.5	signalling.G-proteins	4 (2.01%)	0	1	0	1	1	0	1	0
31	cell	4 (2.01%)	0	0	0	3	1	0	0	0
34.19	transport.Major Intrinsic Proteins	4 (2.01%)	0	0	0	2	2	0	0	0
34.19.2	transport.Major Intrinsic Proteins.TIP	4 (2.01%)	0	0	0	2	2	0	0	0
1	PS	3 (1.51%)	1	0	0	0	0	1	1	0
9	mitochondrial electron transport / ATP synthesis	3 (1.51%)	0	1	0	1	1	0	0	0
11	lipid metabolism	3 (1.51%)	1	0	0	1	0	1	0	0
11.3	lipid metabolism.Phospholipid synthesis	3 (1.51%)	1	0	0	1	0	1	0	0
16.2	secondary metabolism.phenylpropanoids	3 (1.51%)	0	1	0	0	1	0	1	0
17.5	hormone metabolism.ethylene	3 (1.51%)	0	0	0	0	1	2	0	0
27.3.59	RNA.regulation of transcription.Methyl binding domain proteins	3 (1.51%)	1	0	0	0	1	0	1	0
27.3.68	RNA.regulation of transcription.PWWP domain protein	3 (1.51%)	0	0	0	1	1	1	0	0
29.2	protein.synthesis	3 (1.51%)	0	0	0	2	0	1	0	0
29.2.3	protein.synthesis.initiation	3 (1.51%)	0	0	0	2	0	1	0	0
29.3.1	protein.targeting.nucleus	3 (1.51%)	0	0	0	1	1	1	0	0
29.5	protein.degradation	3 (1.51%)	0	2	0	1	0	0	0	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	3 (1.51%)	0	0	0	2	0	0	0	1
30.2	signalling.receptor kinases	3 (1.51%)	0	0	0	0	2	0	1	0
1.1	PS.lightreaction	2 (1.01%)	1	0	0	0	0	0	1	0
16.1.1	secondary metabolism.isoprenoids.non-mevalonate pathway	2 (1.01%)	0	0	0	0	2	0	0	0
27.1.1	RNA.processing.splicing	2 (1.01%)	1	0	0	0	0	1	0	0
27.3.10	RNA.regulation of transcription.C2C2(Zn) YABBY family	2 (1.01%)	0	0	0	2	0	0	0	0
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	2 (1.01%)	0	1	1	0	0	0	0	0
27.3.40	RNA.regulation of transcription.Aux/IAA family	2 (1.01%)	0	0	0	0	2	0	0	0
27.3.99	RNA.regulation of transcription.unclassified	2 (1.01%)	0	1	0	0	1	0	0	0
29.2.1.1.3.2.18	protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L18	2 (1.01%)	0	1	1	0	0	0	0	0
29.5.11	protein.degradation.ubiquitin	2 (1.01%)	0	1	0	1	0	0	0	0
29.5.11.3	protein.degradation.ubiquitin.E2	2 (1.01%)	0	1	0	1	0	0	0	0
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	2 (1.01%)	0	0	0	0	2	0	0	0
30.2.17	signalling.receptor kinases.DUF 26	2 (1.01%)	0	0	0	0	1	0	1	0
9.9	mitochondrial electron transport / ATP synthesis.F1-ATPase	2 (1.01%)	0	0	0	1	1	0	0	0
10.7	cell wall.modification	2 (1.01%)	1	0	0	1	0	0	0	0
16.1	secondary metabolism.isoprenoids	2 (1.01%)	0	0	0	0	2	0	0	0
25	C1-metabolism	2 (1.01%)	1	0	1	0	0	0	0	0
25.1	C1-metabolism.glycine hydroxymethyltransferase	2 (1.01%)	1	0	1	0	0	0	0	0
26.13	misc.acid and other phosphatases	2 (1.01%)	0	0	0	1	1	0	0	0
27.4	RNA.RNA binding	2 (1.01%)	0	0	0	1	0	1	0	0
29.6	protein.folding	2 (1.01%)	0	0	0	0	2	0	0	0
31.4	cell.vesicle transport	2 (1.01%)	0	0	0	2	0	0	0	0
34.22	transport.cyclic nucleotide or calcium regulated channels	2 (1.01%)	0	0	0	1	0	0	1	0
34.7	transport.phosphate	2 (1.01%)	0	0	0	2	0	0	0	0
1.1.1	PS.lightreaction.photosystem II	1 (0.50%)	1	0	0	0	0	0	0	0
1.1.1.2	PS.lightreaction.photosystem II.PSII polypeptide subunits	1 (0.50%)	1	0	0	0	0	0	0	0
1.1.2	PS.lightreaction.photosystem I	1 (0.50%)	0	0	0	0	0	0	1	0
1.1.2.2	PS.lightreaction.photosystem I.PSI polypeptide subunits	1 (0.50%)	0	0	0	0	0	0	1	0
1.2	PS.photorespiration	1 (0.50%)	0	0	0	0	0	1	0	0
1.2.5	PS.photorespiration.serine hydroxymethyltransferase	1 (0.50%)	0	0	0	0	0	1	0	0
8	TCA / org transformation	1 (0.50%)	0	0	0	0	0	0	0	1
10.1	cell wall.precursor synthesis	1 (0.50%)	0	0	0	1	0	0	0	0
10.1.2	cell wall.precursor synthesis.UGE	1 (0.50%)	0	0	0	1	0	0	0	0
10.8	cell wall.pectin*esterases	1 (0.50%)	0	0	0	0	1	0	0	0
10.8.1	cell wall.pectin*esterases.PME	1 (0.50%)	0	0	0	0	1	0	0	0
11.3.3	lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase	1 (0.50%)	1	0	0	0	0	0	0	0
15	metal handling	1 (0.50%)	0	0	0	0	0	0	0	1
15.1	metal handling.acquisition	1 (0.50%)	0	0	0	0	0	0	0	1
17.2	hormone metabolism.auxin	1 (0.50%)	0	0	1	0	0	0	0	0
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	1 (0.50%)	0	0	1	0	0	0	0	0
17.5.1	hormone metabolism.ethylene.synthesis-degradation	1 (0.50%)	0	0	0	0	0	1	0	0
17.5.2	hormone metabolism.ethylene.signal transduction	1 (0.50%)	0	0	0	0	0	1	0	0
17.5.3	hormone metabolism.ethylene.induced-regulated-responsive-activated	1 (0.50%)	0	0	0	0	1	0	0	0
20	stress	1 (0.50%)	0	0	0	0	0	0	0	1
20.1	stress.biotic	1 (0.50%)	0	0	0	0	0	0	0	1
26.10	misc.cytochrome P450	1 (0.50%)	0	1	0	0	0	0	0	0
26.2	misc.UDP glucosyl and glucoronyl transferases	1 (0.50%)	1	0	0	0	0	0	0	0
26.22	misc.short chain dehydrogenase/reductase (SDR)	1 (0.50%)	0	0	0	1	0	0	0	0
26.4	misc.beta 1,3 glucan hydrolases	1 (0.50%)	0	0	0	1	0	0	0	0
27.1.2	RNA.processing.RNA helicase	1 (0.50%)	0	0	0	0	0	1	0	0
27.1.21	RNA.processing.siRNA methyltransferase	1 (0.50%)	0	0	0	0	1	0	0	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	1 (0.50%)	0	0	1	0	0	0	0	0
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	1 (0.50%)	0	0	0	0	1	0	0	0
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	1 (0.50%)	0	0	0	0	1	0	0	0
27.3.27	RNA.regulation of transcription.NAC domain transcription factor family	1 (0.50%)	1	0	0	0	0	0	0	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	1 (0.50%)	0	1	0	0	0	0	0	0
27.3.64	RNA.regulation of transcription.PHOR1	1 (0.50%)	0	1	0	0	0	0	0	0
27.3.8	RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family	1 (0.50%)	0	0	0	1	0	0	0	0
28.1.3	DNA.synthesis/chromatin structure.histone	1 (0.50%)	0	0	0	0	1	0	0	0
29.3.4	protein.targeting.secretory pathway	1 (0.50%)	0	0	0	0	0	1	0	0
29.3.4.99	protein.targeting.secretory pathway.unspecified	1 (0.50%)	0	0	0	0	0	1	0	0
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	1 (0.50%)	0	0	0	0	0	0	1	0
29.5.5	protein.degradation.serine protease	1 (0.50%)	0	1	0	0	0	0	0	0
30.2.11	signalling.receptor kinases.leucine rich repeat XI	1 (0.50%)	0	0	0	0	1	0	0	0
8.3	TCA / org transformation.carbonic anhydrases	1 (0.50%)	0	0	0	0	0	0	0	1
9.3	mitochondrial electron transport / ATP synthesis.electron transfer flavoprotein	1 (0.50%)	0	1	0	0	0	0	0	0
31.1	cell.organisation	1 (0.50%)	0	0	0	1	0	0	0	0
31.3	cell.cycle	1 (0.50%)	0	0	0	0	1	0	0	0
34.12	transport.metal	1 (0.50%)	0	0	0	0	1	0	0	0
34.13	transport.peptides and oligopeptides	1 (0.50%)	0	0	0	0	1	0	0	0
34.9	transport.metabolite transporters at the mitochondrial membrane	1 (0.50%)	0	0	0	0	0	0	1	0