PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_444
Name: AT1G19485;AT4G17950
Description: N/A

#Associated genes: 117
#Associated MapMan terms: 74

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	18 (15.38%)	0	0	2	3	8	3	1	1
27.3	RNA.regulation of transcription	15 (12.82%)	0	0	2	1	8	3	0	1
34	transport	10 (8.55%)	0	2	1	2	2	2	0	1
31	cell	8 (6.84%)	0	0	1	3	2	1	0	1
28	DNA	6 (5.13%)	0	1	3	2	0	0	0	0
31.1	cell.organisation	6 (5.13%)	0	0	1	3	1	1	0	0
28.1	DNA.synthesis/chromatin structure	5 (4.27%)	0	1	3	1	0	0	0	0
26	misc	4 (3.42%)	0	0	0	2	1	0	1	0
30	signalling	4 (3.42%)	0	0	0	1	1	2	0	0
34.12	transport.metal	4 (3.42%)	0	2	1	0	1	0	0	0
21	redox	3 (2.56%)	0	0	1	2	0	0	0	0
27.1	RNA.processing	3 (2.56%)	0	0	0	2	0	0	1	0
27.1.1	RNA.processing.splicing	3 (2.56%)	0	0	0	2	0	0	1	0
27.3.49	RNA.regulation of transcription.GeBP like	3 (2.56%)	0	0	0	1	1	1	0	0
27.3.99	RNA.regulation of transcription.unclassified	3 (2.56%)	0	0	0	0	2	1	0	0
29	protein	3 (2.56%)	0	1	1	0	1	0	0	0
29.4	protein.postranslational modification	3 (2.56%)	0	1	1	0	1	0	0	0
1	PS	2 (1.71%)	0	0	0	1	1	0	0	0
1.1	PS.lightreaction	2 (1.71%)	0	0	0	1	1	0	0	0
1.1.1	PS.lightreaction.photosystem II	2 (1.71%)	0	0	0	1	1	0	0	0
1.1.1.1	PS.lightreaction.photosystem II.LHC-II	2 (1.71%)	0	0	0	1	1	0	0	0
9	mitochondrial electron transport / ATP synthesis	2 (1.71%)	2	0	0	0	0	0	0	0
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	2 (1.71%)	0	0	0	0	0	1	0	1
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	2 (1.71%)	0	0	1	0	1	0	0	0
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	2 (1.71%)	0	0	0	0	1	1	0	0
29.5.11.4.3.1	protein.degradation.ubiquitin.E3.SCF.SKP	2 (1.71%)	0	0	0	2	0	0	0	0
30.4.1	signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase	2 (1.71%)	0	0	0	1	0	1	0	0
9.7	mitochondrial electron transport / ATP synthesis.cytochrome c oxidase	2 (1.71%)	2	0	0	0	0	0	0	0
10	cell wall	2 (1.71%)	0	0	0	0	0	1	0	1
21.2	redox.ascorbate and glutathione	2 (1.71%)	0	0	0	2	0	0	0	0
26.10	misc.cytochrome P450	2 (1.71%)	0	0	0	2	0	0	0	0
26.22	misc.short chain dehydrogenase/reductase (SDR)	2 (1.71%)	0	0	0	0	1	0	1	0
30.4	signalling.phosphinositides	2 (1.71%)	0	0	0	1	0	1	0	0
31.3	cell.cycle	2 (1.71%)	0	0	0	0	1	0	0	1
33	development	2 (1.71%)	0	0	0	0	1	0	0	1
33.99	development.unspecified	2 (1.71%)	0	0	0	0	1	0	0	1
34.18	transport.unspecified anions	2 (1.71%)	0	0	0	0	1	1	0	0
2	major CHO metabolism	1 (0.85%)	0	0	0	0	1	0	0	0
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	1 (0.85%)	0	0	0	0	0	1	0	0
12.1.1	N-metabolism.nitrate metabolism.NR	1 (0.85%)	0	0	1	0	0	0	0	0
2.2	major CHO metabolism.degradation	1 (0.85%)	0	0	0	0	1	0	0	0
10.6	cell wall.degradation	1 (0.85%)	0	0	0	0	0	1	0	0
10.7	cell wall.modification	1 (0.85%)	0	0	0	0	0	0	0	1
12.1	N-metabolism.nitrate metabolism	1 (0.85%)	0	0	1	0	0	0	0	0
2.2.2	major CHO metabolism.degradation.starch	1 (0.85%)	0	0	0	0	1	0	0	0
2.2.2.4	major CHO metabolism.degradation.starch.D enzyme	1 (0.85%)	0	0	0	0	1	0	0	0
12	N-metabolism	1 (0.85%)	0	0	1	0	0	0	0	0
17	hormone metabolism	1 (0.85%)	0	0	0	1	0	0	0	0
17.5	hormone metabolism.ethylene	1 (0.85%)	0	0	0	1	0	0	0	0
17.5.1	hormone metabolism.ethylene.synthesis-degradation	1 (0.85%)	0	0	0	1	0	0	0	0
19	tetrapyrrole synthesis	1 (0.85%)	0	0	0	0	1	0	0	0
19.16	tetrapyrrole synthesis.chlorophyll b synthase	1 (0.85%)	0	0	0	0	1	0	0	0
20	stress	1 (0.85%)	0	0	0	0	0	0	0	1
20.1	stress.biotic	1 (0.85%)	0	0	0	0	0	0	0	1
20.1.7	stress.biotic.PR-proteins	1 (0.85%)	0	0	0	0	0	0	0	1
21.2.1	redox.ascorbate and glutathione.ascorbate	1 (0.85%)	0	0	0	1	0	0	0	0
21.99	redox.misc	1 (0.85%)	0	0	1	0	0	0	0	0
27.3.10	RNA.regulation of transcription.C2C2(Zn) YABBY family	1 (0.85%)	0	0	1	0	0	0	0	0
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	1 (0.85%)	0	0	0	0	1	0	0	0
27.3.37	RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family	1 (0.85%)	0	0	0	0	1	0	0	0
27.3.4	RNA.regulation of transcription.ARF, Auxin Response Factor family	1 (0.85%)	0	0	0	0	1	0	0	0
27.3.50	RNA.regulation of transcription.General Transcription	1 (0.85%)	0	0	0	0	1	0	0	0
28.99	DNA.unspecified	1 (0.85%)	0	0	0	1	0	0	0	0
29.2.1.1.1.1.3	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S3	1 (0.85%)	0	0	0	0	0	0	1	0
29.2.1.1.1.2.16	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L16	1 (0.85%)	0	0	0	0	0	0	1	0
29.4.1	protein.postranslational modification.kinase	1 (0.85%)	0	0	0	0	1	0	0	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	1 (0.85%)	0	1	0	0	0	0	0	0
30.11	signalling.light	1 (0.85%)	0	0	0	0	0	1	0	0
30.3	signalling.calcium	1 (0.85%)	0	0	0	0	1	0	0	0
34.1	transport.p- and v-ATPases	1 (0.85%)	0	0	0	1	0	0	0	0
34.14	transport.unspecified cations	1 (0.85%)	0	0	0	0	0	1	0	0
34.15	transport.potassium	1 (0.85%)	0	0	0	0	0	0	0	1
34.3	transport.amino acids	1 (0.85%)	0	0	0	0	0	1	0	0
34.99	transport.misc	1 (0.85%)	0	0	0	1	0	0	0	0