PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_398
Name: TBP2;ATTRB2
Description: N/A

#Associated genes: 607
#Associated MapMan terms: 152

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	135 (22.24%)	8	15	9	38	27	6	13	19
27.3	RNA.regulation of transcription	86 (14.17%)	5	11	6	26	17	3	7	11
29	protein	66 (10.87%)	9	5	0	19	9	8	7	9
27.1	RNA.processing	33 (5.44%)	2	3	1	8	8	2	3	6
29.5	protein.degradation	27 (4.45%)	4	1	0	9	3	4	2	4
28	DNA	22 (3.62%)	1	3	2	5	3	2	3	3
33	development	22 (3.62%)	4	5	3	4	1	2	2	1
33.99	development.unspecified	22 (3.62%)	4	5	3	4	1	2	2	1
27.1.1	RNA.processing.splicing	18 (2.97%)	2	1	0	5	4	2	2	2
29.4	protein.postranslational modification	17 (2.80%)	2	1	0	8	0	1	1	4
29.5.11	protein.degradation.ubiquitin	17 (2.80%)	3	1	0	7	1	2	2	1
20	stress	13 (2.14%)	1	1	0	2	5	1	2	1
26	misc	12 (1.98%)	0	0	1	2	3	2	3	1
27.3.67	RNA.regulation of transcription.putative transcription regulator	12 (1.98%)	1	3	1	3	1	1	1	1
28.1	DNA.synthesis/chromatin structure	12 (1.98%)	0	1	2	2	2	1	3	1
20.2	stress.abiotic	11 (1.81%)	1	0	0	2	4	1	2	1
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	11 (1.81%)	1	2	0	7	1	0	0	0
31	cell	11 (1.81%)	1	0	0	2	6	1	0	1
27.4	RNA.RNA binding	10 (1.65%)	1	2	1	1	2	1	0	2
27.3.99	RNA.regulation of transcription.unclassified	9 (1.48%)	2	2	1	2	2	0	0	0
29.6	protein.folding	9 (1.48%)	1	2	0	1	2	1	2	0
16	secondary metabolism	8 (1.32%)	0	0	0	1	1	6	0	0
20.2.1	stress.abiotic.heat	8 (1.32%)	1	0	0	0	4	1	1	1
29.2.1.2.2.34	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34	8 (1.32%)	2	2	0	0	0	1	2	1
8	TCA / org transformation	7 (1.15%)	1	1	0	4	1	0	0	0
16.1	secondary metabolism.isoprenoids	7 (1.15%)	0	0	0	0	1	6	0	0
16.1.5	secondary metabolism.isoprenoids.terpenoids	7 (1.15%)	0	0	0	0	1	6	0	0
27.2	RNA.transcription	7 (1.15%)	0	0	1	3	0	0	3	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	7 (1.15%)	0	0	0	5	2	0	0	0
8.1	TCA / org transformation.TCA	7 (1.15%)	1	1	0	4	1	0	0	0
28.99	DNA.unspecified	7 (1.15%)	0	1	0	3	0	1	0	2
31.1	cell.organisation	7 (1.15%)	1	0	0	2	3	1	0	0
27.1.2	RNA.processing.RNA helicase	6 (0.99%)	0	1	1	1	2	0	0	1
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	6 (0.99%)	0	1	0	4	1	0	0	0
29.3	protein.targeting	6 (0.99%)	1	0	0	1	1	1	2	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	6 (0.99%)	2	2	0	1	0	1	0	0
29.5.11.5	protein.degradation.ubiquitin.ubiquitin protease	6 (0.99%)	0	0	0	3	1	2	0	0
9	mitochondrial electron transport / ATP synthesis	5 (0.82%)	1	0	0	0	0	0	3	1
27.3.21	RNA.regulation of transcription.GRAS transcription factor family	5 (0.82%)	0	2	0	1	2	0	0	0
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	5 (0.82%)	0	0	1	2	0	1	0	1
8.1.3	TCA / org transformation.TCA.aconitase	5 (0.82%)	1	1	0	2	1	0	0	0
9.1	mitochondrial electron transport / ATP synthesis.NADH-DH	5 (0.82%)	1	0	0	0	0	0	3	1
26.2	misc.UDP glucosyl and glucoronyl transferases	5 (0.82%)	0	0	0	0	2	1	1	1
9.1.2	mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear	5 (0.82%)	1	0	0	0	0	0	3	1
30	signalling	5 (0.82%)	0	0	1	0	3	0	0	1
27.3.52	RNA.regulation of transcription.Global transcription factor group	4 (0.66%)	0	0	0	2	0	0	1	1
28.1.3	DNA.synthesis/chromatin structure.histone	4 (0.66%)	0	0	1	0	1	0	1	1
29.2	protein.synthesis	4 (0.66%)	1	1	0	0	1	0	0	1
29.2.1.2.2.80	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P0	4 (0.66%)	0	2	0	1	0	0	0	1
29.5.11.20	protein.degradation.ubiquitin.proteasom	4 (0.66%)	1	1	0	2	0	0	0	0
34	transport	4 (0.66%)	0	0	0	0	2	0	2	0
23	nucleotide metabolism	3 (0.49%)	0	0	1	0	0	2	0	0
26.13	misc.acid and other phosphatases	3 (0.49%)	0	0	0	1	0	1	1	0
27.3.29	RNA.regulation of transcription.TCP transcription factor family	3 (0.49%)	0	0	1	1	1	0	0	0
27.3.44	RNA.regulation of transcription.Chromatin Remodeling Factors	3 (0.49%)	0	0	0	0	2	0	0	1
27.3.57	RNA.regulation of transcription.JUMONJI family	3 (0.49%)	0	0	0	0	0	0	2	1
28.2	DNA.repair	3 (0.49%)	1	1	0	0	1	0	0	0
29.2.1.2.1.15	protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S15	3 (0.49%)	0	1	0	1	1	0	0	0
29.2.1.2.1.27	protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S27	3 (0.49%)	0	0	0	0	2	0	0	1
29.3.2	protein.targeting.mitochondria	3 (0.49%)	1	0	0	0	1	0	1	0
29.3.4	protein.targeting.secretory pathway	3 (0.49%)	0	0	0	1	0	1	1	0
29.3.4.1	protein.targeting.secretory pathway.ER	3 (0.49%)	0	0	0	1	0	1	1	0
29.5.5	protein.degradation.serine protease	3 (0.49%)	0	0	0	1	0	1	0	1
31.2	cell.division	3 (0.49%)	0	0	0	0	2	0	0	1
1	PS	2 (0.33%)	0	0	0	0	0	0	1	1
11.8	lipid metabolism.exotics(steroids, squalene etc)	2 (0.33%)	0	0	0	0	0	0	1	1
11.8.1	lipid metabolism.exotics (steroids, squalene etc).sphingolipids	2 (0.33%)	0	0	0	0	0	0	1	1
11.8.1.3	lipid metabolism.exotics (steroids, squalene etc).sphingolipids.ceramide glucosyltransferase	2 (0.33%)	0	0	0	0	0	0	1	1
14.15	S-assimilation.AKN	2 (0.33%)	0	0	0	1	0	0	0	1
20.1	stress.biotic	2 (0.33%)	0	1	0	0	1	0	0	0
20.1.7	stress.biotic.PR-proteins	2 (0.33%)	0	1	0	0	1	0	0	0
23.5	nucleotide metabolism.deoxynucleotide metabolism	2 (0.33%)	0	0	1	0	0	1	0	0
23.5.3	nucleotide metabolism.deoxynucleotide metabolism.cytosine deaminase	2 (0.33%)	0	0	1	0	0	1	0	0
26.17	misc.dynamin	2 (0.33%)	0	0	0	0	1	0	1	0
27.3.15	RNA.regulation of transcription.CCAAT box binding factor family, HAP3	2 (0.33%)	0	0	0	0	1	0	0	1
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	2 (0.33%)	0	0	0	0	2	0	0	0
27.3.68	RNA.regulation of transcription.PWWP domain protein	2 (0.33%)	1	0	0	0	0	0	0	1
27.3.69	RNA.regulation of transcription.SET-domain transcriptional regulator family	2 (0.33%)	0	0	1	0	0	1	0	0
27.3.80	RNA.regulation of transcription.zf-HD	2 (0.33%)	0	0	0	1	0	0	1	0
29.4.1	protein.postranslational modification.kinase	2 (0.33%)	0	0	0	1	0	0	0	1
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	2 (0.33%)	0	0	0	1	0	0	0	1
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	2 (0.33%)	0	0	0	0	2	0	0	0
29.5.3	protein.degradation.cysteine protease	2 (0.33%)	0	0	0	0	1	1	0	0
29.7	protein.glycosylation	2 (0.33%)	0	0	0	0	2	0	0	0
30.2	signalling.receptor kinases	2 (0.33%)	0	0	0	0	1	0	0	1
30.2.11	signalling.receptor kinases.leucine rich repeat XI	2 (0.33%)	0	0	0	0	1	0	0	1
8.1.7	TCA / org transformation.TCA.succinate dehydrogenase	2 (0.33%)	0	0	0	2	0	0	0	0
10	cell wall	2 (0.33%)	0	0	0	1	0	0	0	1
11	lipid metabolism	2 (0.33%)	0	0	0	0	0	0	1	1
14	S-assimilation	2 (0.33%)	0	0	0	1	0	0	0	1
1.1	PS.lightreaction	1 (0.16%)	0	0	0	0	0	0	1	0
1.1.40	PS.lightreaction.cyclic electron flow-chlororespiration	1 (0.16%)	0	0	0	0	0	0	1	0
1.3	PS.calvin cycle	1 (0.16%)	0	0	0	0	0	0	0	1
1.3.7	PS.calvin cycle.FBPase	1 (0.16%)	0	0	0	0	0	0	0	1
10.2	cell wall.cellulose synthesis	1 (0.16%)	0	0	0	0	0	0	0	1
10.8	cell wall.pectin*esterases	1 (0.16%)	0	0	0	1	0	0	0	0
10.8.1	cell wall.pectin*esterases.PME	1 (0.16%)	0	0	0	1	0	0	0	0
13	amino acid metabolism	1 (0.16%)	0	0	0	1	0	0	0	0
13.2	amino acid metabolism.degradation	1 (0.16%)	0	0	0	1	0	0	0	0
13.2.4	amino acid metabolism.degradation.branched chain group	1 (0.16%)	0	0	0	1	0	0	0	0
13.2.4.4	amino acid metabolism.degradation.branched chain group.leucine	1 (0.16%)	0	0	0	1	0	0	0	0
16.1.2	secondary metabolism.isoprenoids.mevalonate pathway	1 (0.16%)	0	0	0	0	1	0	0	0
16.1.2.8	secondary metabolism.isoprenoids.mevalonate pathway.geranyl diphosphate synthase	1 (0.16%)	0	0	0	0	1	0	0	0
16.4	secondary metabolism.N misc	1 (0.16%)	0	0	0	1	0	0	0	0
16.4.2	secondary metabolism.N misc.betaine	1 (0.16%)	0	0	0	1	0	0	0	0
16.4.2.1	secondary metabolism.N misc.betaine.betaine-aldehyde dehydrogenase	1 (0.16%)	0	0	0	1	0	0	0	0
20.2.2	stress.abiotic.cold	1 (0.16%)	0	0	0	0	0	0	1	0
20.2.5	stress.abiotic.light	1 (0.16%)	0	0	0	1	0	0	0	0
23.3	nucleotide metabolism.salvage	1 (0.16%)	0	0	0	0	0	1	0	0
23.3.2	nucleotide metabolism.salvage.nucleoside kinases	1 (0.16%)	0	0	0	0	0	1	0	0
23.3.2.2	nucleotide metabolism.salvage.nucleoside kinases.uridine kinase	1 (0.16%)	0	0	0	0	0	1	0	0
26.10	misc.cytochrome P450	1 (0.16%)	0	0	0	1	0	0	0	0
26.21	misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	1 (0.16%)	0	0	1	0	0	0	0	0
27.1.20	RNA.processing.degradation dicer	1 (0.16%)	0	1	0	0	0	0	0	0
27.3.10	RNA.regulation of transcription.C2C2(Zn) YABBY family	1 (0.16%)	0	0	0	0	1	0	0	0
27.3.12	RNA.regulation of transcription.C3H zinc finger family	1 (0.16%)	0	0	0	0	0	0	1	0
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	1 (0.16%)	0	0	0	0	0	0	0	1
27.3.4	RNA.regulation of transcription.ARF, Auxin Response Factor family	1 (0.16%)	0	1	0	0	0	0	0	0
27.3.40	RNA.regulation of transcription.Aux/IAA family	1 (0.16%)	0	0	0	0	1	0	0	0
27.3.50	RNA.regulation of transcription.General Transcription	1 (0.16%)	0	0	1	0	0	0	0	0
27.3.55	RNA.regulation of transcription.HDA	1 (0.16%)	0	0	0	0	0	0	1	0
27.3.8	RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family	1 (0.16%)	0	0	0	0	0	0	0	1
28.1.1	DNA.synthesis/chromatin structure.retrotransposon/transposase	1 (0.16%)	0	0	0	1	0	0	0	0
28.1.1.4	DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase	1 (0.16%)	0	0	0	1	0	0	0	0
29.1	protein.aa activation	1 (0.16%)	0	0	0	0	0	1	0	0
29.1.1	protein.aa activation.tyrosine-tRNA ligase	1 (0.16%)	0	0	0	0	0	1	0	0
29.2.1.2.1.25	protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S25	1 (0.16%)	0	0	0	0	1	0	0	0
29.2.1.2.2.19	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L19	1 (0.16%)	0	0	0	1	0	0	0	0
29.2.1.2.2.23	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23	1 (0.16%)	1	0	0	0	0	0	0	0
29.2.1.2.2.24	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L24	1 (0.16%)	0	0	0	0	0	0	0	1
29.2.1.2.2.3	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L3	1 (0.16%)	0	1	0	0	0	0	0	0
29.2.1.2.2.31	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L31	1 (0.16%)	0	0	0	0	1	0	0	0
29.2.1.2.2.510	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10A	1 (0.16%)	0	0	0	1	0	0	0	0
29.2.1.2.2.537	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L37A	1 (0.16%)	0	1	0	0	0	0	0	0
29.2.2	protein.synthesis.ribosome biogenesis	1 (0.16%)	1	0	0	0	0	0	0	0
29.2.2.3	protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications	1 (0.16%)	1	0	0	0	0	0	0	0
29.2.2.3.3	protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases	1 (0.16%)	1	0	0	0	0	0	0	0
29.2.3	protein.synthesis.initiation	1 (0.16%)	0	0	0	0	0	0	0	1
29.2.4	protein.synthesis.elongation	1 (0.16%)	0	1	0	0	0	0	0	0
29.2.5	protein.synthesis.release	1 (0.16%)	0	0	0	0	1	0	0	0
29.5.11.1	protein.degradation.ubiquitin.ubiquitin	1 (0.16%)	0	0	0	1	0	0	0	0
29.5.11.3	protein.degradation.ubiquitin.E2	1 (0.16%)	1	0	0	0	0	0	0	0
29.5.11.4.6	protein.degradation.ubiquitin.E3.DCX	1 (0.16%)	0	0	0	1	0	0	0	0
29.5.9	protein.degradation.AAA type	1 (0.16%)	0	0	0	1	0	0	0	0
30.10	signalling.phosphorelay	1 (0.16%)	0	0	0	0	1	0	0	0
30.11	signalling.light	1 (0.16%)	0	0	1	0	0	0	0	0
30.5	signalling.G-proteins	1 (0.16%)	0	0	0	0	1	0	0	0
31.4	cell.vesicle transport	1 (0.16%)	0	0	0	0	1	0	0	0
34.15	transport.potassium	1 (0.16%)	0	0	0	0	1	0	0	0
34.16	transport.ABC transporters and multidrug resistance systems	1 (0.16%)	0	0	0	0	0	0	1	0
34.3	transport.amino acids	1 (0.16%)	0	0	0	0	1	0	0	0
34.9	transport.metabolite transporters at the mitochondrial membrane	1 (0.16%)	0	0	0	0	0	0	1	0