PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_388
Name: SNZ;SMZ;TOE2
Description: N/A

#Associated genes: 400
#Associated MapMan terms: 168

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	86 (21.50%)	0	9	3	28	16	7	6	17
27.3	RNA.regulation of transcription	71 (17.75%)	0	6	3	23	15	6	5	13
29	protein	31 (7.75%)	0	4	3	9	6	3	1	5
28	DNA	17 (4.25%)	0	3	1	4	3	3	0	3
30	signalling	16 (4.00%)	1	0	0	6	3	3	0	3
26	misc	14 (3.50%)	0	3	1	1	5	1	1	2
28.1	DNA.synthesis/chromatin structure	14 (3.50%)	0	3	1	4	2	3	0	1
31	cell	13 (3.25%)	0	2	1	3	3	0	0	4
34	transport	13 (3.25%)	1	0	1	4	4	1	1	1
33	development	11 (2.75%)	0	2	1	2	3	2	0	1
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	10 (2.50%)	0	0	0	6	1	1	1	1
33.99	development.unspecified	10 (2.50%)	0	1	1	2	3	2	0	1
13	amino acid metabolism	9 (2.25%)	0	1	0	4	3	1	0	0
17	hormone metabolism	9 (2.25%)	1	2	0	2	1	1	1	1
20	stress	9 (2.25%)	2	0	1	2	2	2	0	0
29.4	protein.postranslational modification	9 (2.25%)	0	2	1	3	0	2	0	1
20.2	stress.abiotic	8 (2.00%)	2	0	1	2	1	2	0	0
27.4	RNA.RNA binding	8 (2.00%)	0	1	0	4	1	0	1	1
13.2	amino acid metabolism.degradation	7 (1.75%)	0	0	0	4	2	1	0	0
27.1	RNA.processing	7 (1.75%)	0	2	0	1	0	1	0	3
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	7 (1.75%)	0	1	0	1	1	1	1	2
27.3.37	RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family	7 (1.75%)	0	1	1	2	0	1	1	1
28.1.3	DNA.synthesis/chromatin structure.histone	7 (1.75%)	0	0	1	3	1	1	0	1
29.3	protein.targeting	7 (1.75%)	0	1	0	2	3	1	0	0
29.5	protein.degradation	7 (1.75%)	0	0	1	2	2	0	0	2
31.1	cell.organisation	7 (1.75%)	0	0	0	1	3	0	0	3
11	lipid metabolism	6 (1.50%)	1	2	0	2	1	0	0	0
17.2	hormone metabolism.auxin	6 (1.50%)	1	1	0	2	1	0	1	0
20.2.1	stress.abiotic.heat	6 (1.50%)	2	0	0	2	1	1	0	0
26.13	misc.acid and other phosphatases	6 (1.50%)	0	0	1	1	2	0	1	1
27.3.10	RNA.regulation of transcription.C2C2(Zn) YABBY family	6 (1.50%)	0	0	0	3	2	0	0	1
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	6 (1.50%)	0	0	1	3	1	1	0	0
27.3.99	RNA.regulation of transcription.unclassified	6 (1.50%)	0	1	0	0	3	0	0	2
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	6 (1.50%)	0	2	0	2	2	0	0	0
9	mitochondrial electron transport / ATP synthesis	5 (1.25%)	0	0	0	1	3	0	0	1
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	5 (1.25%)	1	1	0	2	1	0	0	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	5 (1.25%)	0	2	0	1	1	0	1	0
29.1	protein.aa activation	5 (1.25%)	0	1	1	1	0	0	1	1
30.3	signalling.calcium	5 (1.25%)	0	0	0	2	1	2	0	0
30.5	signalling.G-proteins	5 (1.25%)	0	0	0	2	1	1	0	1
21	redox	4 (1.00%)	0	0	0	2	2	0	0	0
21.2	redox.ascorbate and glutathione	4 (1.00%)	0	0	0	2	2	0	0	0
27.1.2	RNA.processing.RNA helicase	4 (1.00%)	0	2	0	0	0	0	0	2
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	4 (1.00%)	0	0	1	1	0	0	1	1
29.3.4	protein.targeting.secretory pathway	4 (1.00%)	0	0	0	1	3	0	0	0
29.4.1	protein.postranslational modification.kinase	4 (1.00%)	0	1	1	2	0	0	0	0
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	4 (1.00%)	0	1	1	2	0	0	0	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	4 (1.00%)	0	1	0	0	2	1	0	0
9.1	mitochondrial electron transport / ATP synthesis.NADH-DH	4 (1.00%)	0	0	0	1	2	0	0	1
9.1.2	mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear	4 (1.00%)	0	0	0	1	2	0	0	1
5	fermentation	3 (0.75%)	0	0	0	1	2	0	0	0
11.1	lipid metabolism.FA synthesis and FA elongation	3 (0.75%)	1	1	0	1	0	0	0	0
13.2.3	amino acid metabolism.degradation.aspartate family	3 (0.75%)	0	0	0	2	1	0	0	0
13.2.5	amino acid metabolism.degradation.serine-glycine-cysteine group	3 (0.75%)	0	0	0	2	0	1	0	0
13.2.5.2	amino acid metabolism.degradation.serine-glycine-cysteine group.glycine	3 (0.75%)	0	0	0	2	0	1	0	0
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	3 (0.75%)	0	0	0	3	0	0	0	0
29.1.30	protein.aa activation.pseudouridylate synthase	3 (0.75%)	0	1	1	0	0	0	0	1
29.3.1	protein.targeting.nucleus	3 (0.75%)	0	1	0	1	0	1	0	0
29.5.2	protein.degradation.autophagy	3 (0.75%)	0	0	0	0	2	0	0	1
31.2	cell.division	3 (0.75%)	0	2	0	1	0	0	0	0
1	PS	2 (0.50%)	0	0	0	0	1	0	1	0
1.1	PS.lightreaction	2 (0.50%)	0	0	0	0	1	0	1	0
2	major CHO metabolism	2 (0.50%)	0	0	0	1	0	0	0	1
4	glycolysis	2 (0.50%)	0	0	0	1	1	0	0	0
10	cell wall	2 (0.50%)	0	0	0	1	1	0	0	0
10.1	cell wall.precursor synthesis	2 (0.50%)	0	0	0	1	1	0	0	0
10.1.4	cell wall.precursor synthesis.UGD	2 (0.50%)	0	0	0	1	1	0	0	0
11.1.7	lipid metabolism.FA synthesis and FA elongation.ACP thioesterase	2 (0.50%)	1	1	0	0	0	0	0	0
11.8	lipid metabolism.exotics(steroids, squalene etc)	2 (0.50%)	0	1	0	0	1	0	0	0
13.1	amino acid metabolism.synthesis	2 (0.50%)	0	1	0	0	1	0	0	0
13.2.3.1	amino acid metabolism.degradation.aspartate family.asparagine	2 (0.50%)	0	0	0	2	0	0	0	0
13.2.3.1.1	amino acid metabolism.degradation.aspartate family.asparagine.L-asparaginase	2 (0.50%)	0	0	0	2	0	0	0	0
2.2	major CHO metabolism.degradation	2 (0.50%)	0	0	0	1	0	0	0	1
17.1	hormone metabolism.abscisic acid	2 (0.50%)	0	1	0	0	0	0	0	1
2.2.1	major CHO metabolism.degradation.sucrose	2 (0.50%)	0	0	0	1	0	0	0	1
20.2.2	stress.abiotic.cold	2 (0.50%)	0	0	1	0	0	1	0	0
21.2.1	redox.ascorbate and glutathione.ascorbate	2 (0.50%)	0	0	0	2	0	0	0	0
21.2.1.2	redox.ascorbate and glutathione.ascorbate.GDP-L-galactose-hexose-1-phosphate guanyltransferase	2 (0.50%)	0	0	0	2	0	0	0	0
21.2.2	redox.ascorbate and glutathione.glutathione	2 (0.50%)	0	0	0	0	2	0	0	0
26.10	misc.cytochrome P450	2 (0.50%)	0	0	0	0	1	1	0	0
26.2	misc.UDP glucosyl and glucoronyl transferases	2 (0.50%)	0	1	0	0	1	0	0	0
26.3	misc.gluco-, galacto- and mannosidases	2 (0.50%)	0	2	0	0	0	0	0	0
26.3.2	misc.gluco-, galacto- and mannosidases.beta-galactosidase	2 (0.50%)	0	2	0	0	0	0	0	0
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	2 (0.50%)	0	0	0	1	0	0	0	1
27.3.30	RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family	2 (0.50%)	0	0	0	1	0	0	0	1
27.3.50	RNA.regulation of transcription.General Transcription	2 (0.50%)	0	0	0	0	1	1	0	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	2 (0.50%)	0	0	0	0	1	0	0	1
27.3.69	RNA.regulation of transcription.SET-domain transcriptional regulator family	2 (0.50%)	0	1	0	1	0	0	0	0
27.3.80	RNA.regulation of transcription.zf-HD	2 (0.50%)	0	0	0	0	1	0	0	1
28.2	DNA.repair	2 (0.50%)	0	0	0	0	1	0	0	1
29.1.40	protein.aa activation.bifunctional aminoacyl-tRNA synthetase	2 (0.50%)	0	0	0	1	0	0	1	0
29.3.4.99	protein.targeting.secretory pathway.unspecified	2 (0.50%)	0	0	0	1	1	0	0	0
29.5.1	protein.degradation.subtilases	2 (0.50%)	0	0	1	1	0	0	0	0
30.2.11	signalling.receptor kinases.leucine rich repeat XI	2 (0.50%)	0	0	0	2	0	0	0	0
4.2	glycolysis.plastid branch	2 (0.50%)	0	0	0	1	1	0	0	0
4.2.14	glycolysis.plastid branch.pyruvate kinase (PK)	2 (0.50%)	0	0	0	1	1	0	0	0
5.2	fermentation.PDC	2 (0.50%)	0	0	0	1	1	0	0	0
29.2	protein.synthesis	2 (0.50%)	0	0	0	1	0	0	0	1
30.11	signalling.light	2 (0.50%)	0	0	0	0	1	0	0	1
30.2	signalling.receptor kinases	2 (0.50%)	0	0	0	2	0	0	0	0
31.4	cell.vesicle transport	2 (0.50%)	0	0	1	0	0	0	0	1
34.12	transport.metal	2 (0.50%)	0	0	0	1	0	0	0	1
34.13	transport.peptides and oligopeptides	2 (0.50%)	1	0	0	1	0	0	0	0
34.15	transport.potassium	2 (0.50%)	0	0	0	0	1	1	0	0
34.9	transport.metabolite transporters at the mitochondrial membrane	2 (0.50%)	0	0	0	1	1	0	0	0
1.1.1	PS.lightreaction.photosystem II	1 (0.25%)	0	0	0	0	1	0	0	0
1.1.1.2	PS.lightreaction.photosystem II.PSII polypeptide subunits	1 (0.25%)	0	0	0	0	1	0	0	0
1.1.4	PS.lightreaction.ATP synthase	1 (0.25%)	0	0	0	0	0	0	1	0
1.1.4.4	PS.lightreaction.ATP synthase.gamma chain	1 (0.25%)	0	0	0	0	0	0	1	0
7	OPP	1 (0.25%)	0	0	0	0	0	1	0	0
11.1.10	lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase	1 (0.25%)	0	0	0	1	0	0	0	0
11.3	lipid metabolism.Phospholipid synthesis	1 (0.25%)	0	0	0	1	0	0	0	0
11.8.1	lipid metabolism.exotics (steroids, squalene etc).sphingolipids	1 (0.25%)	0	0	0	0	1	0	0	0
13.1.3	amino acid metabolism.synthesis.aspartate family	1 (0.25%)	0	1	0	0	0	0	0	0
13.1.3.4	amino acid metabolism.synthesis.aspartate family.methionine	1 (0.25%)	0	1	0	0	0	0	0	0
13.1.6	amino acid metabolism.synthesis.aromatic aa	1 (0.25%)	0	0	0	0	1	0	0	0
13.1.6.5	amino acid metabolism.synthesis.aromatic aa.tryptophan	1 (0.25%)	0	0	0	0	1	0	0	0
13.2.2	amino acid metabolism.degradation.glutamate family	1 (0.25%)	0	0	0	0	1	0	0	0
13.2.2.2	amino acid metabolism.degradation.glutamate family.proline	1 (0.25%)	0	0	0	0	1	0	0	0
13.2.3.5	amino acid metabolism.degradation.aspartate family.lysine	1 (0.25%)	0	0	0	0	1	0	0	0
13.2.3.5.1	mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase	1 (0.25%)	0	0	0	0	1	0	0	0
17.1.1	hormone metabolism.abscisic acid.synthesis-degradation	1 (0.25%)	0	1	0	0	0	0	0	0
17.1.3	hormone metabolism.abscisic acid.induced-regulated-responsive-activated	1 (0.25%)	0	0	0	0	0	0	0	1
17.2.2	hormone metabolism.auxin.signal transduction	1 (0.25%)	0	0	0	0	0	0	1	0
17.5	hormone metabolism.ethylene	1 (0.25%)	0	0	0	0	0	1	0	0
17.5.1	hormone metabolism.ethylene.synthesis-degradation	1 (0.25%)	0	0	0	0	0	1	0	0
19.15	tetrapyrrole synthesis.chlorophyll synthase	1 (0.25%)	0	1	0	0	0	0	0	0
2.2.1.3	major CHO metabolism.degradation.sucrose.invertases	1 (0.25%)	0	0	0	1	0	0	0	0
2.2.1.3.1	major CHO metabolism.degradation.sucrose.invertases.neutral	1 (0.25%)	0	0	0	1	0	0	0	0
2.2.1.99	major CHO metabolism.degradation.sucrose.misc	1 (0.25%)	0	0	0	0	0	0	0	1
19	tetrapyrrole synthesis	1 (0.25%)	0	1	0	0	0	0	0	0
20.1	stress.biotic	1 (0.25%)	0	0	0	0	1	0	0	0
26.24	misc.GCN5-related N-acetyltransferase	1 (0.25%)	0	0	0	0	1	0	0	0
26.7	misc.oxidases - copper, flavone etc	1 (0.25%)	0	0	0	0	0	0	0	1
27.1.19	RNA.processing.ribonucleases	1 (0.25%)	0	0	0	0	0	0	0	1
27.3.23	RNA.regulation of transcription.HSF,Heat-shock transcription factor family	1 (0.25%)	0	0	0	0	1	0	0	0
27.3.27	RNA.regulation of transcription.NAC domain transcription factor family	1 (0.25%)	0	0	0	0	0	1	0	0
27.3.4	RNA.regulation of transcription.ARF, Auxin Response Factor family	1 (0.25%)	0	0	0	0	1	0	0	0
27.3.66	RNA.regulation of transcription.Psudo ARR transcription factor family	1 (0.25%)	0	0	0	0	1	0	0	0
27.3.68	RNA.regulation of transcription.PWWP domain protein	1 (0.25%)	0	0	0	0	0	0	0	1
28.99	DNA.unspecified	1 (0.25%)	0	0	0	0	0	0	0	1
29.2.1.2.2.5	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L5	1 (0.25%)	0	0	0	0	1	0	0	0
29.2.1.99.99	protein.synthesis.ribosomal protein.unknown.unknown	1 (0.25%)	0	0	0	0	0	1	0	0
29.2.2	protein.synthesis.ribosome biogenesis	1 (0.25%)	0	0	0	1	0	0	0	0
29.2.2.3	protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications	1 (0.25%)	0	0	0	1	0	0	0	0
29.2.2.3.3	protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases	1 (0.25%)	0	0	0	1	0	0	0	0
29.2.3	protein.synthesis.initiation	1 (0.25%)	0	0	0	0	0	0	0	1
29.3.4.3	protein.targeting.secretory pathway.vacuole	1 (0.25%)	0	0	0	0	1	0	0	0
29.3.4.4	protein.targeting.secretory pathway.plasma membrane	1 (0.25%)	0	0	0	0	1	0	0	0
29.5.11	protein.degradation.ubiquitin	1 (0.25%)	0	0	0	0	0	0	0	1
29.5.11.20	protein.degradation.ubiquitin.proteasom	1 (0.25%)	0	0	0	0	0	0	0	1
29.5.11.4.3.3	protein.degradation.ubiquitin.E3.SCF.cullin	1 (0.25%)	0	0	0	0	0	0	0	1
5.1	fermentation.LDH	1 (0.25%)	0	0	0	0	1	0	0	0
7.3	OPP.electron transfer	1 (0.25%)	0	0	0	0	0	1	0	0
9.2	mitochondrial electron transport / ATP synthesis.NADH-DH	1 (0.25%)	0	0	0	0	1	0	0	0
29.7	protein.glycosylation	1 (0.25%)	0	0	0	0	1	0	0	0
30.1	signalling.in sugar and nutrient physiology	1 (0.25%)	0	0	0	0	0	0	0	1
30.7	signalling.14-3-3 proteins	1 (0.25%)	1	0	0	0	0	0	0	0
31.3	cell.cycle	1 (0.25%)	0	0	0	1	0	0	0	0
31.3.1	cell.cycle.peptidylprolyl isomerase	1 (0.25%)	0	0	0	1	0	0	0	0
33.2	development.late embryogenesis abundant	1 (0.25%)	0	1	0	0	0	0	0	0
34.1	transport.p- and v-ATPases	1 (0.25%)	0	0	0	0	1	0	0	0
34.3	transport.amino acids	1 (0.25%)	0	0	0	0	0	0	1	0
34.6	transport.sulphate	1 (0.25%)	0	0	0	0	1	0	0	0
34.8	transport.metabolite transporters at the envelope membrane	1 (0.25%)	0	0	0	1	0	0	0	0
34.99	transport.misc	1 (0.25%)	0	0	1	0	0	0	0	0
9.2.1	mitochondrial electron transport / ATP synthesis.NADH-DH.type II	1 (0.25%)	0	0	0	0	1	0	0	0
9.2.1.4	mitochondrial electron transport / ATP synthesis.NADH-DH.type II.internal matrix	1 (0.25%)	0	0	0	0	1	0	0	0