PLAZA 3.0 Dicots : Binding Sites

InterPro domains associated with a binding site

Binding site: Matrix_341
Name: HMGA
Description: N/A

#Associated genes: 131
#Associated InterPro terms: 204

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InterPro	Description	#Associated genes	ath	bra	cme	egr	gma	ppe	sly	stu	vvi
IPR027417	P-loop containing nucleoside triphosphate hydrolase	19 (14.50%)	3	1	0	0	8	1	4	0	2
IPR009057	Homeodomain-like	10 (7.63%)	1	0	0	0	7	1	1	0	0
IPR001005	SANT/Myb domain	8 (6.11%)	1	0	0	0	5	1	1	0	0
IPR015943	WD40/YVTN repeat-like-containing domain	8 (6.11%)	0	0	0	0	5	0	3	0	0
IPR001680	WD40 repeat	7 (5.34%)	0	0	0	0	4	0	3	0	0
IPR017986	WD40-repeat-containing domain	7 (5.34%)	0	0	0	0	4	0	3	0	0
IPR001650	Helicase, C-terminal	5 (3.82%)	1	0	0	0	2	0	2	0	0
IPR014001	Helicase, superfamily 1/2, ATP-binding domain	5 (3.82%)	1	0	0	0	2	0	2	0	0
IPR000330	SNF2-related	5 (3.82%)	1	0	0	0	2	0	2	0	0
IPR011991	Winged helix-turn-helix DNA-binding domain	5 (3.82%)	0	0	0	0	4	0	1	0	0
IPR002495	Glycosyl transferase, family 8	4 (3.05%)	0	2	0	0	2	0	0	0	0
IPR015194	ISWI HAND domain	4 (3.05%)	1	0	0	0	2	0	1	0	0
IPR017884	SANT domain	4 (3.05%)	1	0	0	0	2	0	1	0	0
IPR015195	SLIDE domain	4 (3.05%)	1	0	0	0	2	0	1	0	0
IPR019775	WD40 repeat, conserved site	4 (3.05%)	0	0	0	0	2	0	2	0	0
IPR001279	Beta-lactamase-like	3 (2.29%)	0	0	0	0	2	0	1	0	0
IPR004085	DNA topoisomerase VI, subunit A	3 (2.29%)	0	0	0	0	2	0	1	0	0
IPR009071	High mobility group box domain	3 (2.29%)	0	0	0	0	2	1	0	0	0
IPR000048	IQ motif, EF-hand binding site	3 (2.29%)	0	1	0	0	1	0	0	0	1
IPR016196	Major facilitator superfamily domain, general substrate transporter	3 (2.29%)	0	0	0	1	0	0	0	0	2
IPR017930	Myb domain	3 (2.29%)	0	0	0	0	2	1	0	0	0
IPR017877	Myb-like domain	3 (2.29%)	0	0	0	0	2	0	1	0	0
IPR003441	NAC domain	3 (2.29%)	0	0	0	0	2	0	1	0	0
IPR000719	Protein kinase domain	3 (2.29%)	0	0	1	0	2	0	0	0	0
IPR011009	Protein kinase-like domain	3 (2.29%)	0	0	1	0	2	0	0	0	0
IPR000109	Proton-dependent oligopeptide transporter family	3 (2.29%)	0	0	0	1	0	0	0	0	2
IPR011108	RNA-metabolising metallo-beta-lactamase	3 (2.29%)	0	0	0	0	2	0	1	0	0
IPR004613	Ribonuclease J	3 (2.29%)	0	0	0	0	2	0	1	0	0
IPR002290	Serine/threonine- / dual specificity protein kinase, catalytic domain	3 (2.29%)	0	0	1	0	2	0	0	0	0
IPR008271	Serine/threonine-protein kinase, active site	3 (2.29%)	0	0	1	0	2	0	0	0	0
IPR005225	Small GTP-binding protein domain	3 (2.29%)	1	0	0	0	1	0	1	0	0
IPR001806	Small GTPase superfamily	3 (2.29%)	1	0	0	0	1	0	1	0	0
IPR003579	Small GTPase superfamily, Rab type	3 (2.29%)	1	0	0	0	1	0	1	0	0
IPR020849	Small GTPase superfamily, Ras type	3 (2.29%)	1	0	0	0	1	0	1	0	0
IPR003578	Small GTPase superfamily, Rho type	3 (2.29%)	1	0	0	0	1	0	1	0	0
IPR002815	Spo11/DNA topoisomerase VI, subunit A	3 (2.29%)	0	0	0	0	2	0	1	0	0
IPR013049	Spo11/DNA topoisomerase VI, subunit A, N-terminal	3 (2.29%)	0	0	0	0	2	0	1	0	0
IPR005016	TMS membrane protein/tumour differentially expressed protein	3 (2.29%)	0	1	0	0	2	0	0	0	0
IPR001841	Zinc finger, RING-type	3 (2.29%)	0	0	1	0	0	1	1	0	0
IPR003593	AAA+ ATPase domain	2 (1.53%)	0	0	0	0	1	0	1	0	0
IPR005144	ATP-cone	2 (1.53%)	0	0	0	0	1	0	1	0	0
IPR022175	Breast carcinoma amplified sequence 3	2 (1.53%)	0	0	0	0	2	0	0	0	0
IPR010402	CCT domain	2 (1.53%)	0	0	0	0	1	1	0	0	0
IPR008972	Cupredoxin	2 (1.53%)	0	0	0	0	2	0	0	0	0
IPR020838	DBINO domain	2 (1.53%)	0	0	0	0	2	0	0	0	0
IPR010614	DEAD2	2 (1.53%)	0	0	0	0	2	0	0	0	0
IPR000432	DNA mismatch repair protein MutS, C-terminal	2 (1.53%)	1	0	0	0	1	0	0	0	0
IPR016151	DNA mismatch repair protein MutS, N-terminal	2 (1.53%)	1	0	0	0	1	0	0	0	0
IPR007861	DNA mismatch repair protein MutS, clamp	2 (1.53%)	1	0	0	0	1	0	0	0	0
IPR007860	DNA mismatch repair protein MutS, connector domain	2 (1.53%)	1	0	0	0	1	0	0	0	0
IPR007696	DNA mismatch repair protein MutS, core	2 (1.53%)	1	0	0	0	1	0	0	0	0
IPR015536	DNA mismatch repair protein MutS-homologue MSH6	2 (1.53%)	1	0	0	0	1	0	0	0	0
IPR007695	DNA mismatch repair protein MutS-like, N-terminal	2 (1.53%)	1	0	0	0	1	0	0	0	0
IPR018444	Dil domain	2 (1.53%)	0	0	0	0	1	0	0	0	1
IPR002710	Dilute	2 (1.53%)	0	0	0	0	1	0	0	0	1
IPR025312	Domain of unknown function DUF4216	2 (1.53%)	0	0	0	0	0	1	1	0	0
IPR015633	E2F Family	2 (1.53%)	0	0	0	0	2	0	0	0	0
IPR014013	Helicase, superfamily 1/2, ATP-binding domain, DinG/Rad3-type	2 (1.53%)	0	0	0	0	2	0	0	0	0
IPR006554	Helicase-like, DEXD box c2 type	2 (1.53%)	0	0	0	0	2	0	0	0	0
IPR000164	Histone H3	2 (1.53%)	0	0	0	0	1	0	1	0	0
IPR007125	Histone core	2 (1.53%)	0	0	0	0	1	0	1	0	0
IPR025718	Histone deacetylase complex subunit SAP30, Sin3 binding domain	2 (1.53%)	0	0	0	0	1	0	0	0	1
IPR024145	Histone deacetylase complex subunit SAP30/SAP30-like	2 (1.53%)	0	0	0	0	1	0	0	0	1
IPR009072	Histone-fold	2 (1.53%)	0	0	0	0	1	0	1	0	0
IPR017761	Laccase	2 (1.53%)	0	0	0	0	2	0	0	0	0
IPR003591	Leucine-rich repeat, typical subtype	2 (1.53%)	0	0	0	0	2	0	0	0	0
IPR013210	Leucine-rich repeat-containing N-terminal, type 2	2 (1.53%)	0	0	0	0	2	0	0	0	0
IPR013940	Meiosis specific protein SPO22	2 (1.53%)	0	0	0	0	2	0	0	0	0
IPR002355	Multicopper oxidase, copper-binding site	2 (1.53%)	0	0	0	0	2	0	0	0	0
IPR001117	Multicopper oxidase, type 1	2 (1.53%)	0	0	0	0	2	0	0	0	0
IPR011706	Multicopper oxidase, type 2	2 (1.53%)	0	0	0	0	2	0	0	0	0
IPR011707	Multicopper oxidase, type 3	2 (1.53%)	0	0	0	0	2	0	0	0	0
IPR001609	Myosin head, motor domain	2 (1.53%)	0	0	0	0	1	0	0	0	1
IPR004843	Phosphoesterase domain	2 (1.53%)	0	0	0	0	1	1	0	0	0
IPR011047	Quinonprotein alcohol dehydrogenase-like superfamily	2 (1.53%)	0	0	0	0	1	0	1	0	0
IPR009091	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	2 (1.53%)	0	0	0	0	1	1	0	0	0
IPR000408	Regulator of chromosome condensation, RCC1	2 (1.53%)	0	0	0	0	1	1	0	0	0
IPR008926	Ribonucleotide reductase R1 subunit, N-terminal	2 (1.53%)	0	0	0	0	1	0	1	0	0
IPR000788	Ribonucleotide reductase large subunit, C-terminal	2 (1.53%)	0	0	0	0	1	0	1	0	0
IPR013509	Ribonucleotide reductase large subunit, N-terminal	2 (1.53%)	0	0	0	0	1	0	1	0	0
IPR013346	Ribonucleotide reductase, class I , alpha subunit	2 (1.53%)	0	0	0	0	1	0	1	0	0
IPR009686	Senescence/spartin-associated	2 (1.53%)	0	0	0	0	1	0	1	0	0
IPR006186	Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase	2 (1.53%)	0	0	0	0	1	1	0	0	0
IPR003316	Transcription factor E2F/dimerisation partner (TDP)	2 (1.53%)	0	0	0	0	2	0	0	0	0
IPR002999	Tudor domain	2 (1.53%)	1	0	0	0	1	0	0	0	0
IPR006461	Uncharacterised protein family Cys-rich	2 (1.53%)	0	0	0	0	2	0	0	0	0
IPR013083	Zinc finger, RING/FYVE/PHD-type	2 (1.53%)	0	0	1	0	0	0	1	0	0
IPR002225	3-beta hydroxysteroid dehydrogenase/isomerase	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR016192	APOBEC/CMP deaminase, zinc-binding	1 (0.76%)	0	0	0	0	1	0	0	0	0
IPR017956	AT hook, DNA-binding motif	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR003960	ATPase, AAA-type, conserved site	1 (0.76%)	0	0	0	0	1	0	0	0	0
IPR003959	ATPase, AAA-type, core	1 (0.76%)	0	0	0	0	1	0	0	0	0
IPR004776	Auxin efflux carrier	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR014024	Auxin efflux carrier, plant type	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR008417	B-cell receptor-associated 31-like	1 (0.76%)	0	1	0	0	0	0	0	0	0
IPR001357	BRCT domain	1 (0.76%)	0	1	0	0	0	0	0	0	0
IPR001025	Bromo adjacent homology (BAH) domain	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR001487	Bromodomain	1 (0.76%)	0	0	0	0	1	0	0	0	0
IPR001525	C-5 cytosine methyltransferase	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR014939	CDT1 Geminin-binding domain-like	1 (0.76%)	0	0	0	0	0	0	1	0	0
IPR002125	CMP/dCMP deaminase, zinc-binding	1 (0.76%)	0	0	0	0	1	0	0	0	0
IPR016169	CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2	1 (0.76%)	0	0	0	0	0	0	0	0	1
IPR006595	CTLH, C-terminal LisH motif	1 (0.76%)	0	0	0	0	0	0	1	0	0
IPR001757	Cation-transporting P-type ATPase	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR004014	Cation-transporting P-type ATPase, N-terminal	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR011006	CheY-like superfamily	1 (0.76%)	0	0	0	0	1	0	0	0	0
IPR023780	Chromo domain	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR023779	Chromo domain, conserved site	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR016197	Chromo domain-like	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR000953	Chromo domain/shadow	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR018490	Cyclic nucleotide-binding-like	1 (0.76%)	0	0	0	0	0	0	1	0	0
IPR004367	Cyclin, C-terminal domain	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR006671	Cyclin, N-terminal	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR013763	Cyclin-like	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR015517	Cytidine deaminase	1 (0.76%)	0	0	0	0	1	0	0	0	0
IPR016193	Cytidine deaminase-like	1 (0.76%)	0	0	0	0	1	0	0	0	0
IPR011048	Cytochrome cd1-nitrite reductase-like, haem d1 domain	1 (0.76%)	0	0	0	0	0	0	1	0	0
IPR015345	Cytokinin dehydrogenase 1, FAD/cytokinin binding domain	1 (0.76%)	0	0	0	0	0	0	0	0	1
IPR025821	DNA (cytosine-5-)-methyltransferase, plant	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR018117	DNA methylase, C-5 cytosine-specific, active site	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR013627	DNA polymerase alpha, subunit B N-terminal	1 (0.76%)	0	0	0	0	1	0	0	0	0
IPR007185	DNA polymerase alpha/epsilon, subunit B	1 (0.76%)	0	0	0	0	1	0	0	0	0
IPR019038	DNA polymerase subunit Cdc27	1 (0.76%)	0	0	0	0	0	0	1	0	0
IPR008046	DNA replication licensing factor Mcm3	1 (0.76%)	0	0	0	0	0	0	1	0	0
IPR008180	DeoxyUTP pyrophosphatase	1 (0.76%)	0	0	0	0	0	0	1	0	0
IPR008181	DeoxyUTP pyrophosphatase, dUTPase subfamily	1 (0.76%)	0	0	0	0	0	0	1	0	0
IPR005061	Domain of unknown function DUF292, eukaryotic	1 (0.76%)	1	0	0	0	0	0	0	0	0
IPR005175	Domain of unknown function DUF296	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR025064	Domain of unknown function DUF4005	1 (0.76%)	0	1	0	0	0	0	0	0	0
IPR018247	EF-Hand 1, calcium-binding site	1 (0.76%)	0	0	0	0	1	0	0	0	0
IPR002048	EF-hand domain	1 (0.76%)	0	0	0	0	1	0	0	0	0
IPR011992	EF-hand domain pair	1 (0.76%)	0	0	0	0	1	0	0	0	0
IPR006094	FAD linked oxidase, N-terminal	1 (0.76%)	0	0	0	0	0	0	0	0	1
IPR016166	FAD-binding, type 2	1 (0.76%)	0	0	0	0	0	0	0	0	1
IPR016167	FAD-binding, type 2, subdomain 1	1 (0.76%)	0	0	0	0	0	0	0	0	1
IPR016164	FAD-linked oxidase-like, C-terminal	1 (0.76%)	0	0	0	0	0	0	0	0	1
IPR002109	Glutaredoxin	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR011905	Glutaredoxin-like, plant II	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR004129	Glycerophosphoryl diester phosphodiesterase	1 (0.76%)	1	0	0	0	0	0	0	0	0
IPR006534	H+ transporting P-type ATPase, subfamily IIIA	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR023214	HAD-like domain	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR006121	Heavy metal-associated domain, HMA	1 (0.76%)	0	0	0	0	1	0	0	0	0
IPR011722	Hemimethylated DNA-binding domain	1 (0.76%)	0	0	0	0	1	0	0	0	0
IPR023801	Histone deacetylase domain	1 (0.76%)	0	1	0	0	0	0	0	0	0
IPR005821	Ion transport domain	1 (0.76%)	0	0	0	0	0	0	1	0	0
IPR001611	Leucine-rich repeat	1 (0.76%)	0	0	0	0	1	0	0	0	0
IPR001087	Lipase, GDSL	1 (0.76%)	0	1	0	0	0	0	0	0	0
IPR027925	MCM N-terminal domain	1 (0.76%)	0	0	0	0	0	0	1	0	0
IPR019140	Mini-chromosome maintenance complex-binding protein	1 (0.76%)	0	0	0	0	0	0	1	0	0
IPR001208	Mini-chromosome maintenance, DNA-dependent ATPase	1 (0.76%)	0	0	0	0	0	0	1	0	0
IPR018525	Mini-chromosome maintenance, conserved site	1 (0.76%)	0	0	0	0	0	0	1	0	0
IPR006447	Myb domain, plants	1 (0.76%)	0	0	0	0	1	0	0	0	0
IPR004009	Myosin, N-terminal, SH3-like	1 (0.76%)	0	0	0	0	0	0	0	0	1
IPR027401	Myosin-like IQ motif-containing domain	1 (0.76%)	0	0	0	0	1	0	0	0	0
IPR016040	NAD(P)-binding domain	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR027353	NET domain	1 (0.76%)	0	0	0	0	1	0	0	0	0
IPR012463	Ninja	1 (0.76%)	0	0	0	0	0	0	1	0	0
IPR012340	Nucleic acid-binding, OB-fold	1 (0.76%)	0	0	0	0	0	0	1	0	0
IPR005123	Oxoglutarate/iron-dependent dioxygenase	1 (0.76%)	0	0	0	0	0	0	1	0	0
IPR023298	P-type ATPase, transmembrane domain	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR008250	P-type ATPase, A domain	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR023299	P-type ATPase, cytoplasmic domain N	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR018303	P-type ATPase, phosphorylation site	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR017946	PLC-like phosphodiesterase, TIM beta/alpha-barrel domain	1 (0.76%)	1	0	0	0	0	0	0	0	0
IPR001849	Pleckstrin homology domain	1 (0.76%)	0	0	0	0	0	0	0	1	0
IPR011993	Pleckstrin homology-like domain	1 (0.76%)	0	0	0	0	0	0	0	1	0
IPR003938	Potassium channel, voltage-dependent, EAG/ELK/ERG	1 (0.76%)	0	0	0	0	0	0	1	0	0
IPR026852	Probable helicase MAGATAMA 3	1 (0.76%)	0	0	0	0	0	0	0	0	1
IPR004252	Probable transposase, Ptta/En/Spm, plant	1 (0.76%)	0	0	0	0	0	0	1	0	0
IPR006620	Prolyl 4-hydroxylase, alpha subunit	1 (0.76%)	0	0	0	0	0	0	1	0	0
IPR017441	Protein kinase, ATP binding site	1 (0.76%)	0	0	1	0	0	0	0	0	0
IPR015424	Pyridoxal phosphate-dependent transferase	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR015795	Pyruvate kinase, C-terminal	1 (0.76%)	0	1	0	0	0	0	0	0	0
IPR015794	Pyruvate kinase, alpha/beta	1 (0.76%)	0	1	0	0	0	0	0	0	0
IPR026059	Rab3-GAP regulatory subunit	1 (0.76%)	0	0	0	0	0	0	1	0	0
IPR002041	Ran GTPase	1 (0.76%)	0	0	0	0	1	0	0	0	0
IPR003395	RecF/RecN/SMC, N-terminal	1 (0.76%)	0	0	0	0	1	0	0	0	0
IPR012923	Replication fork protection component Swi3	1 (0.76%)	0	0	0	0	0	0	1	0	0
IPR003388	Reticulon	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR013831	SGNH hydrolase-type esterase domain	1 (0.76%)	0	1	0	0	0	0	0	0	0
IPR010935	SMCs flexible hinge	1 (0.76%)	0	0	0	0	1	0	0	0	0
IPR001085	Serine hydroxymethyltransferase	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR019798	Serine hydroxymethyltransferase, pyridoxal phosphate binding site	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR001789	Signal transduction response regulator, receiver domain	1 (0.76%)	0	0	0	0	1	0	0	0	0
IPR027120	Structural maintenance of chromosomes Smc2	1 (0.76%)	0	0	0	0	1	0	0	0	0
IPR011990	Tetratricopeptide-like helical	1 (0.76%)	0	0	0	0	1	0	0	0	0
IPR012336	Thioredoxin-like fold	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR017887	Transcription factor TCP subgroup	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR002487	Transcription factor, K-box	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR002100	Transcription factor, MADS-box	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR004333	Transcription factor, SBP-box	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR005333	Transcription factor, TCP	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR004853	Triose-phosphate transporter domain	1 (0.76%)	0	0	0	0	0	1	0	0	0
IPR001943	UVR domain	1 (0.76%)	0	0	0	0	1	0	0	0	0
IPR003892	Ubiquitin system component Cue	1 (0.76%)	0	0	0	0	0	0	1	0	0
IPR026847	Vacuolar protein sorting-associated protein 13	1 (0.76%)	0	0	0	0	0	0	0	1	0
IPR009543	Vacuolar protein sorting-associated protein 13 domain	1 (0.76%)	0	0	0	0	0	0	0	1	0
IPR009291	Vacuolar protein sorting-associated protein 62	1 (0.76%)	0	0	0	0	0	0	0	1	0
IPR016170	Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain	1 (0.76%)	0	0	0	0	0	0	0	0	1
IPR015415	Vps4 oligomerisation, C-terminal	1 (0.76%)	0	0	0	0	1	0	0	0	0
IPR001878	Zinc finger, CCHC-type	1 (0.76%)	0	0	0	0	0	0	1	0	0
IPR003851	Zinc finger, Dof-type	1 (0.76%)	0	0	1	0	0	0	0	0	0