PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_313
Name: ATMYB65;MYB33
Description: N/A

#Associated genes: 678
#Associated MapMan terms: 198

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	136 (20.06%)	6	19	3	39	33	8	11	17
27.3	RNA.regulation of transcription	125 (18.44%)	6	18	3	37	30	5	10	16
29	protein	54 (7.96%)	1	7	2	20	10	2	2	10
30	signalling	42 (6.19%)	1	9	0	12	9	2	2	7
31	cell	33 (4.87%)	4	9	1	7	4	3	3	2
10	cell wall	30 (4.42%)	3	5	1	7	4	3	1	6
29.4	protein.postranslational modification	23 (3.39%)	1	1	1	9	6	1	2	2
31.1	cell.organisation	21 (3.10%)	3	7	1	5	2	1	1	1
20	stress	20 (2.95%)	2	4	1	8	4	0	1	0
10.6	cell wall.degradation	19 (2.80%)	3	5	1	2	1	2	1	4
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	19 (2.80%)	1	2	0	4	7	2	1	2
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	18 (2.65%)	3	5	1	2	1	1	1	4
20.2	stress.abiotic	17 (2.51%)	2	4	0	8	2	0	1	0
33	development	16 (2.36%)	0	1	1	6	3	0	4	1
33.99	development.unspecified	16 (2.36%)	0	1	1	6	3	0	4	1
20.2.1	stress.abiotic.heat	15 (2.21%)	2	4	0	6	2	0	1	0
30.5	signalling.G-proteins	15 (2.21%)	0	4	0	5	3	0	1	2
1	PS	14 (2.06%)	1	2	0	0	4	0	1	6
26	misc	12 (1.77%)	2	1	0	5	2	2	0	0
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	12 (1.77%)	1	1	0	5	2	1	1	1
28	DNA	12 (1.77%)	0	0	2	2	5	0	0	3
28.1	DNA.synthesis/chromatin structure	12 (1.77%)	0	0	2	2	5	0	0	3
29.5	protein.degradation	12 (1.77%)	0	3	0	4	2	0	0	3
27.3.15	RNA.regulation of transcription.CCAAT box binding factor family, HAP3	11 (1.62%)	1	4	0	2	2	0	1	1
34	transport	11 (1.62%)	0	0	0	4	2	1	3	1
1.3	PS.calvin cycle	10 (1.47%)	1	2	0	0	3	0	0	4
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	10 (1.47%)	1	0	0	3	3	0	1	2
30.3	signalling.calcium	10 (1.47%)	0	0	0	3	3	1	1	2
16	secondary metabolism	8 (1.18%)	0	1	0	4	3	0	0	0
27.1	RNA.processing	8 (1.18%)	0	1	0	1	2	2	1	1
10.7	cell wall.modification	7 (1.03%)	0	0	0	2	3	1	0	1
17	hormone metabolism	7 (1.03%)	0	0	0	1	2	0	1	3
28.1.3	DNA.synthesis/chromatin structure.histone	7 (1.03%)	0	0	0	0	5	0	0	2
29.3	protein.targeting	7 (1.03%)	0	1	0	3	0	0	0	3
29.7	protein.glycosylation	7 (1.03%)	0	1	0	4	1	0	0	1
31.4	cell.vesicle transport	7 (1.03%)	0	1	0	1	1	1	2	1
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	6 (0.88%)	1	0	0	4	0	1	0	0
29.4.1	protein.postranslational modification.kinase	6 (0.88%)	0	1	1	1	1	1	0	1
29.5.11	protein.degradation.ubiquitin	6 (0.88%)	0	3	0	2	0	0	0	1
30.11	signalling.light	6 (0.88%)	0	2	0	2	0	0	0	2
5	fermentation	5 (0.74%)	0	0	0	4	1	0	0	0
27.3.30	RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family	5 (0.74%)	0	1	0	2	1	0	0	1
27.3.37	RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family	5 (0.74%)	0	0	0	2	2	0	0	1
27.3.67	RNA.regulation of transcription.putative transcription regulator	5 (0.74%)	0	1	1	0	2	0	1	0
27.3.99	RNA.regulation of transcription.unclassified	5 (0.74%)	0	1	0	0	3	0	0	1
29.3.4	protein.targeting.secretory pathway	5 (0.74%)	0	0	0	3	0	0	0	2
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	5 (0.74%)	0	0	0	1	4	0	0	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	5 (0.74%)	0	0	0	2	1	0	0	2
5.2	fermentation.PDC	5 (0.74%)	0	0	0	4	1	0	0	0
30.7	signalling.14-3-3 proteins	5 (0.74%)	1	2	0	0	1	0	0	1
1.1	PS.lightreaction	4 (0.59%)	0	0	0	0	1	0	1	2
1.3.13	PS.calvin cycle.rubisco interacting	4 (0.59%)	0	0	0	0	2	0	0	2
11	lipid metabolism	4 (0.59%)	0	1	0	0	1	0	1	1
15	metal handling	4 (0.59%)	0	0	0	3	1	0	0	0
15.2	metal handling.binding, chelation and storage	4 (0.59%)	0	0	0	3	1	0	0	0
16.2	secondary metabolism.phenylpropanoids	4 (0.59%)	0	0	0	1	3	0	0	0
16.2.1	secondary metabolism.phenylpropanoids.lignin biosynthesis	4 (0.59%)	0	0	0	1	3	0	0	0
16.2.1.1	secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL	4 (0.59%)	0	0	0	1	3	0	0	0
21	redox	4 (0.59%)	0	1	0	1	2	0	0	0
23	nucleotide metabolism	4 (0.59%)	0	0	0	1	2	0	0	1
26.10	misc.cytochrome P450	4 (0.59%)	1	0	0	2	1	0	0	0
27.3.12	RNA.regulation of transcription.C3H zinc finger family	4 (0.59%)	1	1	0	0	2	0	0	0
27.3.21	RNA.regulation of transcription.GRAS transcription factor family	4 (0.59%)	0	0	0	2	1	0	0	1
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	4 (0.59%)	0	2	0	0	0	0	0	2
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	4 (0.59%)	0	0	1	0	0	0	1	2
27.3.5	RNA.regulation of transcription.ARR	4 (0.59%)	0	0	0	2	0	0	1	1
29.3.4.99	protein.targeting.secretory pathway.unspecified	4 (0.59%)	0	0	0	3	0	0	0	1
29.6	protein.folding	4 (0.59%)	0	1	1	0	0	1	0	1
31.3	cell.cycle	4 (0.59%)	1	1	0	1	1	0	0	0
34.99	transport.misc	4 (0.59%)	0	0	0	0	2	1	1	0
1.1.40	PS.lightreaction.cyclic electron flow-chlororespiration	3 (0.44%)	0	0	0	0	0	0	1	2
1.3.8	PS.calvin cycle.transketolase	3 (0.44%)	0	2	0	0	0	0	0	1
7	OPP	3 (0.44%)	0	2	0	0	1	0	0	0
7.2	OPP.non-reductive PP	3 (0.44%)	0	2	0	0	1	0	0	0
9	mitochondrial electron transport / ATP synthesis	3 (0.44%)	0	0	0	1	0	0	2	0
10.2	cell wall.cellulose synthesis	3 (0.44%)	0	0	0	2	0	0	0	1
16.1	secondary metabolism.isoprenoids	3 (0.44%)	0	0	0	3	0	0	0	0
20.1	stress.biotic	3 (0.44%)	0	0	1	0	2	0	0	0
23.4	nucleotide metabolism.phosphotransfer and pyrophosphatases	3 (0.44%)	0	0	0	1	1	0	0	1
26.19	misc.plastocyanin-like	3 (0.44%)	1	0	0	2	0	0	0	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	3 (0.44%)	0	1	0	1	1	0	0	0
27.3.9	RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family	3 (0.44%)	0	0	0	1	1	0	1	0
28.1.3.2	DNA.synthesis/chromatin structure.histone.core	3 (0.44%)	0	0	0	0	1	0	0	2
28.1.3.2.3	DNA.synthesis/chromatin structure.histone.core.H3	3 (0.44%)	0	0	0	0	1	0	0	2
29.2.1.2.2.80	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P0	3 (0.44%)	0	0	0	0	3	0	0	0
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	3 (0.44%)	0	1	0	0	1	1	0	0
29.5.7	protein.degradation.metalloprotease	3 (0.44%)	0	0	0	2	0	0	0	1
30.2	signalling.receptor kinases	3 (0.44%)	0	0	0	0	2	1	0	0
30.4	signalling.phosphinositides	3 (0.44%)	0	1	0	2	0	0	0	0
1.3.2	PS.calvin cycle.rubisco small subunit	2 (0.29%)	1	0	0	0	0	0	0	1
2	major CHO metabolism	2 (0.29%)	0	0	0	0	1	0	0	1
10.2.2	cell wall.cellulose synthesis.COBRA	2 (0.29%)	0	0	0	2	0	0	0	0
11.3	lipid metabolism.Phospholipid synthesis	2 (0.29%)	0	0	0	0	1	0	1	0
13	amino acid metabolism	2 (0.29%)	1	0	0	0	0	0	1	0
13.99	amino acid metabolism.misc	2 (0.29%)	1	0	0	0	0	0	1	0
16.1.1	secondary metabolism.isoprenoids.non-mevalonate pathway	2 (0.29%)	0	0	0	2	0	0	0	0
9.7	mitochondrial electron transport / ATP synthesis.cytochrome c oxidase	2 (0.29%)	0	0	0	0	0	0	2	0
17.2	hormone metabolism.auxin	2 (0.29%)	0	0	0	0	1	0	0	1
17.2.2	hormone metabolism.auxin.signal transduction	2 (0.29%)	0	0	0	0	1	0	0	1
17.5	hormone metabolism.ethylene	2 (0.29%)	0	0	0	0	0	0	1	1
17.5.2	hormone metabolism.ethylene.signal transduction	2 (0.29%)	0	0	0	0	0	0	1	1
17.6	hormone metabolism.gibberelin	2 (0.29%)	0	0	0	0	1	0	0	1
23.4.99	nucleotide metabolism.phosphotransfer and pyrophosphatases.misc	2 (0.29%)	0	0	0	0	1	0	0	1
25	C1-metabolism	2 (0.29%)	1	0	0	0	1	0	0	0
27.1.2	RNA.processing.RNA helicase	2 (0.29%)	0	0	0	0	0	1	1	0
27.3.23	RNA.regulation of transcription.HSF,Heat-shock transcription factor family	2 (0.29%)	0	0	0	0	0	1	1	0
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	2 (0.29%)	0	0	0	1	0	0	0	1
27.3.4	RNA.regulation of transcription.ARF, Auxin Response Factor family	2 (0.29%)	0	0	0	2	0	0	0	0
27.3.57	RNA.regulation of transcription.JUMONJI family	2 (0.29%)	0	1	0	0	1	0	0	0
27.3.66	RNA.regulation of transcription.Psudo ARR transcription factor family	2 (0.29%)	0	1	0	0	0	0	1	0
27.3.69	RNA.regulation of transcription.SET-domain transcriptional regulator family	2 (0.29%)	0	0	0	1	1	0	0	0
27.4	RNA.RNA binding	2 (0.29%)	0	0	0	0	1	1	0	0
29.2.1.2.1.7	protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S7	2 (0.29%)	1	1	0	0	0	0	0	0
30.4.1	signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase	2 (0.29%)	0	1	0	1	0	0	0	0
34.19	transport.Major Intrinsic Proteins	2 (0.29%)	0	0	0	0	0	0	1	1
34.2	transport.sugars	2 (0.29%)	0	0	0	2	0	0	0	0
7.2.1	OPP.non-reductive PP.transketolase	2 (0.29%)	0	2	0	0	0	0	0	0
1.1.1	PS.lightreaction.photosystem II	1 (0.15%)	0	0	0	0	1	0	0	0
1.1.1.1	PS.lightreaction.photosystem II.LHC-II	1 (0.15%)	0	0	0	0	1	0	0	0
1.3.11	PS.calvin cycle.RPE	1 (0.15%)	0	0	0	0	1	0	0	0
8	TCA / org transformation	1 (0.15%)	0	0	0	0	0	0	1	0
10.1	cell wall.precursor synthesis	1 (0.15%)	0	0	0	1	0	0	0	0
10.1.6	cell wall.precursor synthesis.GAE	1 (0.15%)	0	0	0	1	0	0	0	0
10.2.1	cell wall.cellulose synthesis.cellulose synthase	1 (0.15%)	0	0	0	0	0	0	0	1
10.6.1	cell wall.degradation.cellulases and beta -1,4-glucanases	1 (0.15%)	0	0	0	0	0	1	0	0
11.8	lipid metabolism.exotics(steroids, squalene etc)	1 (0.15%)	0	1	0	0	0	0	0	0
11.8.1	lipid metabolism.exotics (steroids, squalene etc).sphingolipids	1 (0.15%)	0	1	0	0	0	0	0	0
11.9	lipid metabolism.lipid degradation	1 (0.15%)	0	0	0	0	0	0	0	1
11.9.3	lipid metabolism.lipid degradation.lysophospholipases	1 (0.15%)	0	0	0	0	0	0	0	1
16.1.4	secondary metabolism.isoprenoids.carotenoids	1 (0.15%)	0	0	0	1	0	0	0	0
16.1.4.1	secondary metabolism.isoprenoids.carotenoids.phytoene synthase	1 (0.15%)	0	0	0	1	0	0	0	0
16.8	secondary metabolism.flavonoids	1 (0.15%)	0	1	0	0	0	0	0	0
16.8.2	secondary metabolism.flavonoids.chalcones	1 (0.15%)	0	1	0	0	0	0	0	0
17.4	hormone metabolism.cytokinin	1 (0.15%)	0	0	0	1	0	0	0	0
17.4.1	hormone metabolism.cytokinin.synthesis-degradation	1 (0.15%)	0	0	0	1	0	0	0	0
17.6.2	hormone metabolism.gibberelin.signal transduction	1 (0.15%)	0	0	0	0	0	0	0	1
17.6.3	hormone metabolism.gibberelin.induced-regulated-responsive-activated	1 (0.15%)	0	0	0	0	1	0	0	0
2.1	major CHO metabolism.synthesis	1 (0.15%)	0	0	0	0	0	0	0	1
18.11	Co-factor and vitamine metabolism.lipoic acid	1 (0.15%)	0	0	0	0	1	0	0	0
2.1.2	major CHO metabolism.synthesis.starch	1 (0.15%)	0	0	0	0	0	0	0	1
2.1.2.3	major CHO metabolism.synthesis.starch.starch branching	1 (0.15%)	0	0	0	0	0	0	0	1
2.2	major CHO metabolism.degradation	1 (0.15%)	0	0	0	0	1	0	0	0
2.2.2	major CHO metabolism.degradation.starch	1 (0.15%)	0	0	0	0	1	0	0	0
2.2.2.3	major CHO metabolism.degradation.starch.glucan water dikinase	1 (0.15%)	0	0	0	0	1	0	0	0
18	Co-factor and vitamine metabolism	1 (0.15%)	0	0	0	0	1	0	0	0
19	tetrapyrrole synthesis	1 (0.15%)	0	0	0	0	1	0	0	0
19.3	tetrapyrrole synthesis.GSA	1 (0.15%)	0	0	0	0	1	0	0	0
21.1	redox.thioredoxin	1 (0.15%)	0	1	0	0	0	0	0	0
21.2	redox.ascorbate and glutathione	1 (0.15%)	0	0	0	1	0	0	0	0
21.2.1	redox.ascorbate and glutathione.ascorbate	1 (0.15%)	0	0	0	1	0	0	0	0
21.3	redox.heme	1 (0.15%)	0	0	0	0	1	0	0	0
21.4	redox.glutaredoxins	1 (0.15%)	0	0	0	0	1	0	0	0
23.2	nucleotide metabolism.degradation	1 (0.15%)	0	0	0	0	1	0	0	0
23.4.1	nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase	1 (0.15%)	0	0	0	1	0	0	0	0
25.1	C1-metabolism.glycine hydroxymethyltransferase	1 (0.15%)	1	0	0	0	0	0	0	0
25.4	C1-metabolism.5-formyltetrahydrofolate cyclo-ligase	1 (0.15%)	0	0	0	0	1	0	0	0
26.2	misc.UDP glucosyl and glucoronyl transferases	1 (0.15%)	0	1	0	0	0	0	0	0
26.22	misc.short chain dehydrogenase/reductase (SDR)	1 (0.15%)	0	0	0	0	1	0	0	0
26.28	misc.GDSL-motif lipase	1 (0.15%)	0	0	0	1	0	0	0	0
26.3	misc.gluco-, galacto- and mannosidases	1 (0.15%)	0	0	0	0	0	1	0	0
26.3.4	misc.gluco-, galacto- and mannosidases.endoglucanase	1 (0.15%)	0	0	0	0	0	1	0	0
26.8	misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases	1 (0.15%)	0	0	0	0	0	1	0	0
27.2	RNA.transcription	1 (0.15%)	0	0	0	1	0	0	0	0
27.3.17	RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family	1 (0.15%)	0	0	0	1	0	0	0	0
27.3.18	RNA.regulation of transcription.E2F/DP transcription factor family	1 (0.15%)	0	1	0	0	0	0	0	0
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	1 (0.15%)	0	0	0	0	1	0	0	0
27.3.26	RNA.regulation of transcription.MYB-related transcription factor family	1 (0.15%)	0	0	0	1	0	0	0	0
27.3.29	RNA.regulation of transcription.TCP transcription factor family	1 (0.15%)	0	0	0	1	0	0	0	0
27.3.48	RNA.regulation of transcription.FHA transcription factor	1 (0.15%)	0	1	0	0	0	0	0	0
27.3.49	RNA.regulation of transcription.GeBP like	1 (0.15%)	0	0	0	0	1	0	0	0
27.3.52	RNA.regulation of transcription.Global transcription factor group	1 (0.15%)	0	0	0	1	0	0	0	0
27.3.68	RNA.regulation of transcription.PWWP domain protein	1 (0.15%)	0	0	1	0	0	0	0	0
27.3.8	RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family	1 (0.15%)	0	0	0	1	0	0	0	0
29.2	protein.synthesis	1 (0.15%)	0	0	0	0	1	0	0	0
29.2.1.1.1.1.530	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S30A	1 (0.15%)	0	1	0	0	0	0	0	0
29.2.1.2.2.12	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L12	1 (0.15%)	0	0	0	0	0	0	1	0
29.2.1.2.2.513	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13A	1 (0.15%)	0	1	0	0	0	0	0	0
29.2.3	protein.synthesis.initiation	1 (0.15%)	0	0	0	0	1	0	0	0
29.3.1	protein.targeting.nucleus	1 (0.15%)	0	1	0	0	0	0	0	0
29.3.3	protein.targeting.chloroplast	1 (0.15%)	0	0	0	0	0	0	0	1
29.3.4.3	protein.targeting.secretory pathway.vacuole	1 (0.15%)	0	0	0	0	0	0	0	1
29.5.3	protein.degradation.cysteine protease	1 (0.15%)	0	0	0	0	1	0	0	0
29.5.5	protein.degradation.serine protease	1 (0.15%)	0	0	0	0	0	0	0	1
29.5.9	protein.degradation.AAA type	1 (0.15%)	0	0	0	0	1	0	0	0
30.2.11	signalling.receptor kinases.leucine rich repeat XI	1 (0.15%)	0	0	0	0	0	1	0	0
30.2.17	signalling.receptor kinases.DUF 26	1 (0.15%)	0	0	0	0	1	0	0	0
30.2.99	signalling.receptor kinases.misc	1 (0.15%)	0	0	0	0	1	0	0	0
31.2	cell.division	1 (0.15%)	0	0	0	0	0	1	0	0
34.12	transport.metal	1 (0.15%)	0	0	0	0	0	0	1	0
34.18	transport.unspecified anions	1 (0.15%)	0	0	0	1	0	0	0	0
34.19.1	transport.Major Intrinsic Proteins.PIP	1 (0.15%)	0	0	0	0	0	0	0	1
34.19.2	transport.Major Intrinsic Proteins.TIP	1 (0.15%)	0	0	0	0	0	0	1	0
7.2.3	OPP.non-reductive PP.ribulose-phosphate 3-epimerase	1 (0.15%)	0	0	0	0	1	0	0	0
8.3	TCA / org transformation.carbonic anhydrases	1 (0.15%)	0	0	0	0	0	0	1	0
9.1	mitochondrial electron transport / ATP synthesis.NADH-DH	1 (0.15%)	0	0	0	1	0	0	0	0
34.20	transport.porins	1 (0.15%)	0	0	0	1	0	0	0	0
34.8	transport.metabolite transporters at the envelope membrane	1 (0.15%)	0	0	0	1	0	0	0	0
9.1.2	mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear	1 (0.15%)	0	0	0	1	0	0	0	0