MapMan terms associated with a binding site

Binding site
Matrix_29
Name
AP1
Description
N/A
#Associated genes
630
#Associated MapMan terms
239

Click table-header(s) to enable sorting
MapMan Description #Associated genes ath bra cme egr gma ptr ppe sly stu vvi
27RNA68 (10.79%)250246816205
29protein57 (9.05%)460155515106
27.3RNA.regulation of transcription55 (8.73%)240175616203
26misc47 (7.46%)1001111413007
30signalling37 (5.87%)05015057104
34transport36 (5.71%)03092511105
29.4protein.postranslational modification26 (4.13%)3307316102
31cell20 (3.17%)2005331204
20stress18 (2.86%)10010115000
29.5protein.degradation18 (2.86%)1304123004
17hormone metabolism17 (2.70%)1003425101
33development17 (2.70%)2101145102
33.99development.unspecified16 (2.54%)2101144102
30.2signalling.receptor kinases14 (2.22%)0109012001
16secondary metabolism13 (2.06%)1204211002
20.2stress.abiotic12 (1.90%)1005114000
28DNA12 (1.90%)0103133001
10cell wall11 (1.75%)2102033000
31.1cell.organisation11 (1.75%)1004211101
29.5.11.4.2protein.degradation.ubiquitin.E3.RING10 (1.59%)0103012102
26.10misc.cytochrome P4509 (1.43%)0002043000
29.4.1protein.postranslational modification.kinase9 (1.43%)1203002001
29.4.1.57protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII9 (1.43%)1203002001
11lipid metabolism8 (1.27%)0203120000
20.2.1stress.abiotic.heat8 (1.27%)0003113000
27.1RNA.processing8 (1.27%)0104110001
16.1secondary metabolism.isoprenoids7 (1.11%)0102110002
26.2misc.UDP glucosyl and glucoronyl transferases7 (1.11%)0001113001
28.1DNA.synthesis/chromatin structure7 (1.11%)0102121000
29.5.11protein.degradation.ubiquitin7 (1.11%)1100012002
29.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX7 (1.11%)0105010000
30.5signalling.G-proteins7 (1.11%)0004020001
3minor CHO metabolism6 (0.95%)0003111000
13amino acid metabolism6 (0.95%)0102002001
20.1stress.biotic6 (0.95%)0005001000
26.7misc.oxidases - copper, flavone etc6 (0.95%)0002012001
27.3.24RNA.regulation of transcription.MADS box transcription factor family6 (0.95%)1102100100
27.3.99RNA.regulation of transcription.unclassified6 (0.95%)0102021000
30.11signalling.light6 (0.95%)0002013000
30.2.11signalling.receptor kinases.leucine rich repeat XI6 (0.95%)0003011001
30.2.17signalling.receptor kinases.DUF 266 (0.95%)0104001000
30.6signalling.MAP kinases6 (0.95%)0100012002
34.16transport.ABC transporters and multidrug resistance systems6 (0.95%)0002004000
34.99transport.misc6 (0.95%)0101110101
13.1amino acid metabolism.synthesis5 (0.79%)0101002001
17.2hormone metabolism.auxin5 (0.79%)0001102100
23nucleotide metabolism5 (0.79%)0003011000
26.13misc.acid and other phosphatases5 (0.79%)0002010002
27.3.67RNA.regulation of transcription.putative transcription regulator5 (0.79%)0001013000
28.1.3DNA.synthesis/chromatin structure.histone5 (0.79%)0002021000
28.99DNA.unspecified5 (0.79%)0001012001
29.5.11.1protein.degradation.ubiquitin.ubiquitin5 (0.79%)1000011002
29.5.11.4.5.2protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ5 (0.79%)0000111002
31.4cell.vesicle transport5 (0.79%)0001110101
34.3transport.amino acids5 (0.79%)0101012000
10.6cell wall.degradation4 (0.63%)1002001000
11.1lipid metabolism.FA synthesis and FA elongation4 (0.63%)0101020000
16.1.3secondary metabolism.isoprenoids.tocopherol biosynthesis4 (0.63%)0001110001
16.1.3.2secondary metabolism.isoprenoids.tocopherol biosynthesis.homogentisate phytyltransferase4 (0.63%)0001110001
16.2secondary metabolism.phenylpropanoids4 (0.63%)1101001000
17.1hormone metabolism.abscisic acid4 (0.63%)0000220000
17.1.2hormone metabolism.abscisic acid.signal transduction4 (0.63%)0000220000
18Co-factor and vitamine metabolism4 (0.63%)1001110000
26.22misc.short chain dehydrogenase/reductase (SDR)4 (0.63%)0000012001
27.4RNA.RNA binding4 (0.63%)0003010000
29.2.1.1.1.2.11protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L114 (0.63%)0101011000
29.3protein.targeting4 (0.63%)0001003000
29.5.3protein.degradation.cysteine protease4 (0.63%)0201000001
3.4minor CHO metabolism.myo-inositol4 (0.63%)0001111000
3.4.2minor CHO metabolism.myo-inositol.InsP-Kinases4 (0.63%)0001111000
34.15transport.potassium4 (0.63%)0002010001
10.7cell wall.modification3 (0.48%)0100011000
16.1.5secondary metabolism.isoprenoids.terpenoids3 (0.48%)0101000001
17.2.3hormone metabolism.auxin.induced-regulated-responsive-activated3 (0.48%)0001001100
20.1.7stress.biotic.PR-proteins3 (0.48%)0003000000
23.3nucleotide metabolism.salvage3 (0.48%)0003000000
26.3misc.gluco-, galacto- and mannosidases3 (0.48%)0000011001
26.3.2misc.gluco-, galacto- and mannosidases.beta-galactosidase3 (0.48%)0000011001
27.1.2RNA.processing.RNA helicase3 (0.48%)0002100000
27.3.11RNA.regulation of transcription.C2H2 zinc finger family3 (0.48%)0000003000
27.3.32RNA.regulation of transcription.WRKY domain transcription factor family3 (0.48%)0001002000
27.3.57RNA.regulation of transcription.JUMONJI family3 (0.48%)0001200000
29.2protein.synthesis3 (0.48%)0001011000
29.5.9protein.degradation.AAA type3 (0.48%)0001110000
34.1transport.p- and v-ATPases3 (0.48%)0001001001
34.1.1transport.p- and v-ATPases.H+-transporting two-sector ATPase3 (0.48%)0001001001
34.14transport.unspecified cations3 (0.48%)0001001001
1PS2 (0.32%)0001010000
1.1PS.lightreaction2 (0.32%)0001010000
1.1.1PS.lightreaction.photosystem II2 (0.32%)0001010000
1.1.1.2PS.lightreaction.photosystem II.PSII polypeptide subunits2 (0.32%)0001010000
2major CHO metabolism2 (0.32%)0000001001
4glycolysis2 (0.32%)0001000001
10.1cell wall.precursor synthesis2 (0.32%)0000011000
10.1.6cell wall.precursor synthesis.GAE2 (0.32%)0000011000
10.6.2cell wall.degradation.mannan-xylose-arabinose-fucose2 (0.32%)0001001000
10.6.3cell wall.degradation.pectate lyases and polygalacturonases2 (0.32%)1001000000
11.1.10lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase2 (0.32%)0000020000
2.1major CHO metabolism.synthesis2 (0.32%)0000001001
11.9lipid metabolism.lipid degradation2 (0.32%)0001100000
13.1.3amino acid metabolism.synthesis.aspartate family2 (0.32%)0000001001
13.1.3.2amino acid metabolism.synthesis.aspartate family.threonine2 (0.32%)0000001001
13.1.3.2.1amino acid metabolism.synthesis.aspartate family.threonine.threonine synthase2 (0.32%)0000001001
13.1.5amino acid metabolism.synthesis.serine-glycine-cysteine group2 (0.32%)0100001000
13.1.5.3amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine2 (0.32%)0100001000
13.1.5.3.2amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.SAT2 (0.32%)0100001000
15.2metal handling.binding, chelation and storage2 (0.32%)0100010000
16.2.1secondary metabolism.phenylpropanoids.lignin biosynthesis2 (0.32%)1000001000
17.3hormone metabolism.brassinosteroid2 (0.32%)1000100000
17.3.1hormone metabolism.brassinosteroid.synthesis-degradation2 (0.32%)1000100000
17.3.1.1hormone metabolism.brassinosteroid.synthesis-degradation.BRs2 (0.32%)1000100000
17.3.1.1.1hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DET22 (0.32%)1000100000
17.4hormone metabolism.cytokinin2 (0.32%)0001001000
17.4.2hormone metabolism.cytokinin.signal transduction2 (0.32%)0001001000
17.5hormone metabolism.ethylene2 (0.32%)0000001001
17.5.1hormone metabolism.ethylene.synthesis-degradation2 (0.32%)0000001001
17.7hormone metabolism.jasmonate2 (0.32%)0001001000
17.7.1hormone metabolism.jasmonate.synthesis-degradation2 (0.32%)0001001000
17.7.1.2hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase2 (0.32%)0001001000
2.1.2major CHO metabolism.synthesis.starch2 (0.32%)0000001001
20.2.99stress.abiotic.unspecified2 (0.32%)1001000000
23.3.3nucleotide metabolism.salvage.NUDIX hydrolases2 (0.32%)0002000000
26.17misc.dynamin2 (0.32%)1000010000
26.24misc.GCN5-related N-acetyltransferase2 (0.32%)0000010001
26.8misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases2 (0.32%)0001010000
26.9misc.glutathione S transferases2 (0.32%)0000020000
27.1.19RNA.processing.ribonucleases2 (0.32%)0001010000
27.2RNA.transcription2 (0.32%)0001000001
27.3.20RNA.regulation of transcription.G2-like transcription factor family, GARP2 (0.32%)0001000001
27.3.25RNA.regulation of transcription.MYB domain transcription factor family2 (0.32%)0001000100
27.3.30RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family2 (0.32%)0200000000
27.3.39RNA.regulation of transcription.AtSR Transcription Factor family2 (0.32%)0002000000
27.3.52RNA.regulation of transcription.Global transcription factor group2 (0.32%)0001001000
27.3.60RNA.regulation of transcription.NIN-like bZIP-related family2 (0.32%)0000101000
4.1glycolysis.cytosolic branch2 (0.32%)0001000001
29.1protein.aa activation2 (0.32%)0000002000
29.2.3protein.synthesis.initiation2 (0.32%)0000011000
29.3.4protein.targeting.secretory pathway2 (0.32%)0001001000
29.3.4.4protein.targeting.secretory pathway.plasma membrane2 (0.32%)0001001000
29.6protein.folding2 (0.32%)0001010000
29.7protein.glycosylation2 (0.32%)0001100000
30.3signalling.calcium2 (0.32%)0100000100
34.12transport.metal2 (0.32%)0100010000
34.13transport.peptides and oligopeptides2 (0.32%)0000011000
34.2transport.sugars2 (0.32%)0000100001
4.1.4glycolysis.cytosolic branch.phosphofructokinase (PFK)2 (0.32%)0001000001
15metal handling2 (0.32%)0100010000
21redox2 (0.32%)0101000000
24Biodegradation of Xenobiotics2 (0.32%)0000001001
10.2cell wall.cellulose synthesis1 (0.16%)0000010000
10.8cell wall.pectin*esterases1 (0.16%)1000000000
10.8.1cell wall.pectin*esterases.PME1 (0.16%)1000000000
11.1.8lipid metabolism.FA synthesis and FA elongation.acyl coa ligase1 (0.16%)0001000000
11.1.9lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase1 (0.16%)0100000000
11.3lipid metabolism.Phospholipid synthesis1 (0.16%)0001000000
11.3.8lipid metabolism.Phospholipid synthesis.phosphatidylserine decarboxylase1 (0.16%)0001000000
11.6lipid metabolism.lipid transfer proteins etc1 (0.16%)0100000000
11.9.3lipid metabolism.lipid degradation.lysophospholipases1 (0.16%)0001000000
11.9.3.2lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase1 (0.16%)0001000000
11.9.4lipid metabolism.lipid degradation.beta-oxidation1 (0.16%)0000100000
11.9.4.9lipid metabolism.lipid degradation.beta-oxidation.multifunctional1 (0.16%)0000100000
13.1.6amino acid metabolism.synthesis.aromatic aa1 (0.16%)0001000000
13.1.6.3amino acid metabolism.synthesis.aromatic aa.phenylalanine1 (0.16%)0001000000
13.1.6.3.1amino acid metabolism.synthesis.aromatic aa.phenylalanine.arogenate dehydratase / prephenate dehydratase1 (0.16%)0001000000
13.2amino acid metabolism.degradation1 (0.16%)0001000000
13.2.4amino acid metabolism.degradation.branched chain group1 (0.16%)0001000000
13.2.4.4amino acid metabolism.degradation.branched chain group.leucine1 (0.16%)0001000000
16.10secondary metabolism.simple phenols1 (0.16%)0001000000
16.2.1.3secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL1 (0.16%)0000001000
16.2.1.5secondary metabolism.phenylpropanoids.lignin biosynthesis.C3H1 (0.16%)1000000000
16.8secondary metabolism.flavonoids1 (0.16%)0000100000
16.8.3secondary metabolism.flavonoids.dihydroflavonols1 (0.16%)0000100000
16.8.3.1secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase1 (0.16%)0000100000
17.2.1hormone metabolism.auxin.synthesis-degradation1 (0.16%)0000001000
17.2.2hormone metabolism.auxin.signal transduction1 (0.16%)0000100000
2.1.2.1major CHO metabolism.synthesis.starch.AGPase1 (0.16%)0000000001
20.2.3stress.abiotic.drought/salt1 (0.16%)0001000000
21.1redox.thioredoxin1 (0.16%)0001000000
21.4redox.glutaredoxins1 (0.16%)0100000000
23.1nucleotide metabolism.synthesis1 (0.16%)0000001000
23.1.1nucleotide metabolism.synthesis.pyrimidine1 (0.16%)0000001000
23.1.1.10nucleotide metabolism.synthesis.pyrimidine.CTP synthetase1 (0.16%)0000001000
23.3.1nucleotide metabolism.salvage.phosphoribosyltransferases1 (0.16%)0001000000
23.3.1.1nucleotide metabolism.salvage.phosphoribosyltransferases.aprt1 (0.16%)0001000000
23.4nucleotide metabolism.phosphotransfer and pyrophosphatases1 (0.16%)0000010000
23.4.99nucleotide metabolism.phosphotransfer and pyrophosphatases.misc1 (0.16%)0000010000
24.2Biodegradation of Xenobiotics.lactoylglutathione lyase1 (0.16%)0000000001
26.1misc.misc21 (0.16%)0001000000
26.11misc.alcohol dehydrogenases1 (0.16%)0000001000
26.12misc.peroxidases1 (0.16%)0000001000
26.16misc.myrosinases-lectin-jacalin1 (0.16%)0001000000
26.28misc.GDSL-motif lipase1 (0.16%)0001000000
27.1.1RNA.processing.splicing1 (0.16%)0001000000
27.3.1RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family1 (0.16%)0001000000
27.3.12RNA.regulation of transcription.C3H zinc finger family1 (0.16%)0000000001
27.3.13RNA.regulation of transcription.CCAAT box binding factor family, DR11 (0.16%)0000001000
27.3.22RNA.regulation of transcription.HB,Homeobox transcription factor family1 (0.16%)0001000000
27.3.29RNA.regulation of transcription.TCP transcription factor family1 (0.16%)0000001000
27.3.3RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family1 (0.16%)0000001000
27.3.35RNA.regulation of transcription.bZIP transcription factor family1 (0.16%)0000010000
27.3.4RNA.regulation of transcription.ARF, Auxin Response Factor family1 (0.16%)0000000001
27.3.5RNA.regulation of transcription.ARR1 (0.16%)0001000000
27.3.50RNA.regulation of transcription.General Transcription1 (0.16%)0001000000
27.3.55RNA.regulation of transcription.HDA1 (0.16%)0000010000
27.3.6RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family1 (0.16%)0001000000
27.3.62RNA.regulation of transcription.Nucleosome/chromatin assembly factor group1 (0.16%)1000000000
27.3.68RNA.regulation of transcription.PWWP domain protein1 (0.16%)0000100000
27.3.7RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family1 (0.16%)0000001000
27.3.80RNA.regulation of transcription.zf-HD1 (0.16%)0000001000
27.3.82RNA.regulation of transcription.plant TF (pbf2)1 (0.16%)0000001000
29.1.17protein.aa activation.glutamate-tRNA ligase1 (0.16%)0000001000
29.2.1.2.1.9protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S91 (0.16%)0000000100
29.2.4protein.synthesis.elongation1 (0.16%)0001000000
29.3.1protein.targeting.nucleus1 (0.16%)0000001000
29.3.3protein.targeting.chloroplast1 (0.16%)0000001000
29.5.1protein.degradation.subtilases1 (0.16%)0001000000
29.5.11.3protein.degradation.ubiquitin.E21 (0.16%)0000001000
29.5.11.5protein.degradation.ubiquitin.ubiquitin protease1 (0.16%)0100000000
29.5.2protein.degradation.autophagy1 (0.16%)0000000001
29.5.5protein.degradation.serine protease1 (0.16%)0000001000
3.2minor CHO metabolism.trehalose1 (0.16%)0001000000
3.2.2minor CHO metabolism.trehalose.TPP1 (0.16%)0001000000
3.7minor CHO metabolism.sugar kinases1 (0.16%)0001000000
30.11.1signalling.light.COP9 signalosome1 (0.16%)0000001000
30.2.24signalling.receptor kinases.S-locus glycoprotein like1 (0.16%)0001000000
30.2.25signalling.receptor kinases.wall associated kinase1 (0.16%)0001000000
30.2.99signalling.receptor kinases.misc1 (0.16%)0001000000
30.4signalling.phosphinositides1 (0.16%)0100000000
30.4.1signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase1 (0.16%)0100000000
30.9signalling.lipids1 (0.16%)0100000000
31.2cell.division1 (0.16%)0000000001
31.3cell.cycle1 (0.16%)0000000001
31.5cell.cell death1 (0.16%)0000010000
31.5.1cell.cell death.plants1 (0.16%)0000010000
31.99cell.unspecified1 (0.16%)1000000000
33.3development.squamosa promoter binding like (SPL)1 (0.16%)0000001000
34.22transport.cyclic nucleotide or calcium regulated channels1 (0.16%)0001000000
34.8transport.metabolite transporters at the envelope membrane1 (0.16%)0000001000
34.9transport.metabolite transporters at the mitochondrial membrane1 (0.16%)0000001000