PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_289
Name: WRKY25
Description: N/A

#Associated genes: 336
#Associated MapMan terms: 129

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	62 (18.45%)	7	6	12	13	7	11	4	2
27.3	RNA.regulation of transcription	60 (17.86%)	7	6	11	13	7	11	4	1
30	signalling	34 (10.12%)	1	0	7	9	3	6	1	7
29	protein	21 (6.25%)	0	1	3	4	5	6	0	2
29.4	protein.postranslational modification	17 (5.06%)	0	1	3	3	3	5	0	2
31	cell	17 (5.06%)	1	3	0	6	4	1	1	1
34	transport	14 (4.17%)	2	3	3	2	1	3	0	0
30.5	signalling.G-proteins	13 (3.87%)	0	0	2	4	2	2	1	2
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	10 (2.98%)	0	0	2	4	3	0	1	0
30.2	signalling.receptor kinases	10 (2.98%)	0	0	4	1	0	2	0	3
31.4	cell.vesicle transport	10 (2.98%)	1	3	0	3	2	1	0	0
17	hormone metabolism	9 (2.68%)	3	0	1	0	2	0	2	1
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	9 (2.68%)	1	1	1	3	2	1	0	0
27.3.64	RNA.regulation of transcription.PHOR1	9 (2.68%)	0	2	1	2	1	2	1	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	9 (2.68%)	1	0	6	0	1	1	0	0
30.2.11	signalling.receptor kinases.leucine rich repeat XI	9 (2.68%)	0	0	3	1	0	2	0	3
26	misc	8 (2.38%)	1	1	1	2	2	1	0	0
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	7 (2.08%)	1	0	0	2	0	2	2	0
30.7	signalling.14-3-3 proteins	7 (2.08%)	1	0	1	2	0	2	0	1
16	secondary metabolism	6 (1.79%)	0	1	1	0	2	1	1	0
21	redox	5 (1.49%)	0	0	0	3	1	0	1	0
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	5 (1.49%)	0	0	2	0	1	2	0	0
31.1	cell.organisation	5 (1.49%)	0	0	0	2	1	0	1	1
33	development	5 (1.49%)	1	1	0	0	0	1	2	0
33.99	development.unspecified	5 (1.49%)	1	1	0	0	0	1	2	0
4	glycolysis	4 (1.19%)	0	0	1	0	1	1	0	1
4.2	glycolysis.plastid branch	4 (1.19%)	0	0	1	0	1	1	0	1
16.2	secondary metabolism.phenylpropanoids	4 (1.19%)	0	0	1	0	1	1	1	0
17.2	hormone metabolism.auxin	4 (1.19%)	1	0	1	0	1	0	1	0
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	4 (1.19%)	1	0	1	0	1	0	1	0
17.5	hormone metabolism.ethylene	4 (1.19%)	1	0	0	0	1	0	1	1
17.5.2	hormone metabolism.ethylene.signal transduction	4 (1.19%)	1	0	0	0	1	0	1	1
4.2.14	glycolysis.plastid branch.pyruvate kinase (PK)	4 (1.19%)	0	0	1	0	1	1	0	1
20	stress	4 (1.19%)	2	1	0	0	0	0	1	0
29.4.1	protein.postranslational modification.kinase	4 (1.19%)	0	0	0	0	0	3	0	1
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	4 (1.19%)	0	0	0	0	0	3	0	1
9	mitochondrial electron transport / ATP synthesis	3 (0.89%)	0	0	0	0	0	0	3	0
20.1	stress.biotic	3 (0.89%)	2	1	0	0	0	0	0	0
21.2	redox.ascorbate and glutathione	3 (0.89%)	0	0	0	2	1	0	0	0
21.2.1	redox.ascorbate and glutathione.ascorbate	3 (0.89%)	0	0	0	2	1	0	0	0
23	nucleotide metabolism	3 (0.89%)	0	1	0	0	1	0	0	1
27.3.21	RNA.regulation of transcription.GRAS transcription factor family	3 (0.89%)	0	0	3	0	0	0	0	0
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	3 (0.89%)	1	1	0	1	0	0	0	0
28	DNA	3 (0.89%)	0	0	0	0	1	1	0	1
30.1	signalling.in sugar and nutrient physiology	3 (0.89%)	0	0	0	2	0	0	0	1
34.12	transport.metal	3 (0.89%)	0	1	0	0	0	2	0	0
34.3	transport.amino acids	3 (0.89%)	0	0	1	0	1	1	0	0
1	PS	2 (0.60%)	0	0	0	0	0	0	1	1
3	minor CHO metabolism	2 (0.60%)	0	0	0	1	0	0	0	1
23.4.99	nucleotide metabolism.phosphotransfer and pyrophosphatases.misc	2 (0.60%)	0	1	0	0	0	0	0	1
9.7	mitochondrial electron transport / ATP synthesis.cytochrome c oxidase	2 (0.60%)	0	0	0	0	0	0	2	0
10	cell wall	2 (0.60%)	0	0	1	1	0	0	0	0
21.4	redox.glutaredoxins	2 (0.60%)	0	0	0	1	0	0	1	0
23.4	nucleotide metabolism.phosphotransfer and pyrophosphatases	2 (0.60%)	0	1	0	0	0	0	0	1
26.12	misc.peroxidases	2 (0.60%)	1	0	0	0	1	0	0	0
26.28	misc.GDSL-motif lipase	2 (0.60%)	0	0	1	1	0	0	0	0
26.9	misc.glutathione S transferases	2 (0.60%)	0	1	0	0	1	0	0	0
27.3.12	RNA.regulation of transcription.C3H zinc finger family	2 (0.60%)	0	0	0	2	0	0	0	0
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	2 (0.60%)	1	1	0	0	0	0	0	0
27.3.30	RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family	2 (0.60%)	0	0	0	0	0	0	1	1
27.3.37	RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family	2 (0.60%)	1	1	0	0	0	0	0	0
27.3.4	RNA.regulation of transcription.ARF, Auxin Response Factor family	2 (0.60%)	0	0	1	0	0	1	0	0
27.3.5	RNA.regulation of transcription.ARR	2 (0.60%)	0	0	0	1	0	1	0	0
27.4	RNA.RNA binding	2 (0.60%)	0	0	1	0	0	0	0	1
28.1	DNA.synthesis/chromatin structure	2 (0.60%)	0	0	0	0	1	1	0	0
29.5	protein.degradation	2 (0.60%)	0	0	0	0	1	1	0	0
34.2	transport.sugars	2 (0.60%)	0	0	0	2	0	0	0	0
34.23	transport.hormones	2 (0.60%)	1	0	1	0	0	0	0	0
34.23.1	transport.hormones.auxin	2 (0.60%)	1	0	1	0	0	0	0	0
1.1	PS.lightreaction	1 (0.30%)	0	0	0	0	0	0	1	0
1.1.40	PS.lightreaction.cyclic electron flow-chlororespiration	1 (0.30%)	0	0	0	0	0	0	1	0
1.3	PS.calvin cycle	1 (0.30%)	0	0	0	0	0	0	0	1
1.3.8	PS.calvin cycle.transketolase	1 (0.30%)	0	0	0	0	0	0	0	1
2	major CHO metabolism	1 (0.30%)	0	0	0	0	0	1	0	0
2.2	major CHO metabolism.degradation	1 (0.30%)	0	0	0	0	0	1	0	0
3.5	minor CHO metabolism.others	1 (0.30%)	0	0	0	0	0	0	0	1
3.6	minor CHO metabolism.callose	1 (0.30%)	0	0	0	1	0	0	0	0
9.9	mitochondrial electron transport / ATP synthesis.F1-ATPase	1 (0.30%)	0	0	0	0	0	0	1	0
10.2	cell wall.cellulose synthesis	1 (0.30%)	0	0	0	1	0	0	0	0
10.2.1	cell wall.cellulose synthesis.cellulose synthase	1 (0.30%)	0	0	0	1	0	0	0	0
10.6	cell wall.degradation	1 (0.30%)	0	0	1	0	0	0	0	0
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	1 (0.30%)	0	0	1	0	0	0	0	0
11	lipid metabolism	1 (0.30%)	0	0	1	0	0	0	0	0
11.4	lipid metabolism.TAG synthesis	1 (0.30%)	0	0	1	0	0	0	0	0
16.1	secondary metabolism.isoprenoids	1 (0.30%)	0	1	0	0	0	0	0	0
16.1.4	secondary metabolism.isoprenoids.carotenoids	1 (0.30%)	0	1	0	0	0	0	0	0
16.1.4.6	secondary metabolism.isoprenoids.carotenoids.carotenoid beta ring hydroxylase	1 (0.30%)	0	1	0	0	0	0	0	0
16.2.1	secondary metabolism.phenylpropanoids.lignin biosynthesis	1 (0.30%)	0	0	0	0	0	0	1	0
16.2.1.10	secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD	1 (0.30%)	0	0	0	0	0	0	1	0
16.8	secondary metabolism.flavonoids	1 (0.30%)	0	0	0	0	1	0	0	0
16.8.3	secondary metabolism.flavonoids.dihydroflavonols	1 (0.30%)	0	0	0	0	1	0	0	0
16.8.3.1	secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase	1 (0.30%)	0	0	0	0	1	0	0	0
17.3	hormone metabolism.brassinosteroid	1 (0.30%)	1	0	0	0	0	0	0	0
17.3.2	hormone metabolism.brassinosteroid.signal transduction	1 (0.30%)	1	0	0	0	0	0	0	0
17.3.2.1	hormone metabolism.brassinosteroid.signal transduction.BRI	1 (0.30%)	1	0	0	0	0	0	0	0
2.2.1	major CHO metabolism.degradation.sucrose	1 (0.30%)	0	0	0	0	0	1	0	0
2.2.1.3	major CHO metabolism.degradation.sucrose.invertases	1 (0.30%)	0	0	0	0	0	1	0	0
2.2.1.3.1	major CHO metabolism.degradation.sucrose.invertases.neutral	1 (0.30%)	0	0	0	0	0	1	0	0
20.1.7	stress.biotic.PR-proteins	1 (0.30%)	1	0	0	0	0	0	0	0
20.2	stress.abiotic	1 (0.30%)	0	0	0	0	0	0	1	0
20.2.1	stress.abiotic.heat	1 (0.30%)	0	0	0	0	0	0	1	0
23.3	nucleotide metabolism.salvage	1 (0.30%)	0	0	0	0	1	0	0	0
23.3.3	nucleotide metabolism.salvage.NUDIX hydrolases	1 (0.30%)	0	0	0	0	1	0	0	0
26.21	misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	1 (0.30%)	0	0	0	1	0	0	0	0
26.4	misc.beta 1,3 glucan hydrolases	1 (0.30%)	0	0	0	0	0	1	0	0
27.3.15	RNA.regulation of transcription.CCAAT box binding factor family, HAP3	1 (0.30%)	0	0	0	0	0	1	0	0
27.3.17	RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family	1 (0.30%)	0	0	0	0	0	1	0	0
27.3.27	RNA.regulation of transcription.NAC domain transcription factor family	1 (0.30%)	0	0	0	0	0	0	1	0
27.3.48	RNA.regulation of transcription.FHA transcription factor	1 (0.30%)	0	0	0	0	0	1	0	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	1 (0.30%)	0	0	1	0	0	0	0	0
27.3.69	RNA.regulation of transcription.SET-domain transcriptional regulator family	1 (0.30%)	1	0	0	0	0	0	0	0
27.3.70	RNA.regulation of transcription.Silencing Group	1 (0.30%)	0	0	0	0	0	1	0	0
27.3.99	RNA.regulation of transcription.unclassified	1 (0.30%)	1	0	0	0	0	0	0	0
28.2	DNA.repair	1 (0.30%)	0	0	0	0	0	0	0	1
29.3	protein.targeting	1 (0.30%)	0	0	0	0	1	0	0	0
29.3.4	protein.targeting.secretory pathway	1 (0.30%)	0	0	0	0	1	0	0	0
29.3.4.99	protein.targeting.secretory pathway.unspecified	1 (0.30%)	0	0	0	0	1	0	0	0
29.5.11	protein.degradation.ubiquitin	1 (0.30%)	0	0	0	0	1	0	0	0
29.5.11.20	protein.degradation.ubiquitin.proteasom	1 (0.30%)	0	0	0	0	1	0	0	0
29.7	protein.glycosylation	1 (0.30%)	0	0	0	1	0	0	0	0
30.2.25	signalling.receptor kinases.wall associated kinase	1 (0.30%)	0	0	1	0	0	0	0	0
30.3	signalling.calcium	1 (0.30%)	0	0	0	0	1	0	0	0
31.3	cell.cycle	1 (0.30%)	0	0	0	0	1	0	0	0
31.5	cell.cell death	1 (0.30%)	0	0	0	1	0	0	0	0
31.5.1	cell.cell death.plants	1 (0.30%)	0	0	0	1	0	0	0	0
34.14	transport.unspecified cations	1 (0.30%)	0	1	0	0	0	0	0	0
34.16	transport.ABC transporters and multidrug resistance systems	1 (0.30%)	0	1	0	0	0	0	0	0
34.7	transport.phosphate	1 (0.30%)	0	0	1	0	0	0	0	0
34.8	transport.metabolite transporters at the envelope membrane	1 (0.30%)	1	0	0	0	0	0	0	0