PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_285
Name: DDF1
Description: N/A

#Associated genes: 722
#Associated MapMan terms: 180

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	174 (24.10%)	12	21	14	53	35	12	8	19
27.3	RNA.regulation of transcription	159 (22.02%)	11	17	13	50	32	11	8	17
17	hormone metabolism	41 (5.68%)	3	6	4	10	7	3	0	8
29	protein	41 (5.68%)	4	5	5	6	10	4	3	4
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	30 (4.16%)	3	3	1	11	8	0	1	3
29.4	protein.postranslational modification	26 (3.60%)	1	3	4	4	6	3	2	3
30	signalling	25 (3.46%)	5	3	1	3	8	0	2	3
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	22 (3.05%)	3	4	3	2	5	2	1	2
17.5	hormone metabolism.ethylene	21 (2.91%)	2	4	2	2	4	1	0	6
33	development	21 (2.91%)	3	3	2	7	4	1	1	0
20	stress	20 (2.77%)	5	4	0	4	4	2	1	0
17.5.1	hormone metabolism.ethylene.synthesis-degradation	19 (2.63%)	2	4	2	1	4	1	0	5
27.3.99	RNA.regulation of transcription.unclassified	19 (2.63%)	1	2	2	7	3	2	0	2
31	cell	19 (2.63%)	0	2	0	7	7	1	0	2
26	misc	17 (2.35%)	1	2	5	5	1	0	1	2
34	transport	17 (2.35%)	1	0	1	5	4	2	2	2
29.4.1	protein.postranslational modification.kinase	16 (2.22%)	1	1	2	3	5	1	1	2
33.99	development.unspecified	16 (2.22%)	2	1	2	7	3	1	0	0
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	15 (2.08%)	0	1	2	3	5	1	1	2
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	14 (1.94%)	1	0	1	5	4	1	1	1
27.1	RNA.processing	13 (1.80%)	1	4	1	3	3	1	0	0
20.1	stress.biotic	10 (1.39%)	1	2	0	3	2	1	1	0
20.2	stress.abiotic	10 (1.39%)	4	2	0	1	2	1	0	0
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	10 (1.39%)	0	1	2	2	3	1	0	1
27.3.4	RNA.regulation of transcription.ARF, Auxin Response Factor family	10 (1.39%)	0	2	1	4	1	0	1	1
27.3.40	RNA.regulation of transcription.Aux/IAA family	10 (1.39%)	1	2	1	3	1	0	0	2
30.2	signalling.receptor kinases	10 (1.39%)	2	1	1	1	3	0	0	2
31.1	cell.organisation	10 (1.39%)	0	0	0	5	4	0	0	1
17.5.1.1	hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase	9 (1.25%)	2	2	0	0	2	0	0	3
27.3.67	RNA.regulation of transcription.putative transcription regulator	9 (1.25%)	0	1	0	2	1	2	1	2
29.5	protein.degradation	8 (1.11%)	1	1	0	2	2	1	0	1
3	minor CHO metabolism	7 (0.97%)	0	0	0	4	0	1	0	2
10	cell wall	7 (0.97%)	1	3	0	0	1	1	1	0
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	7 (0.97%)	2	0	0	4	1	0	0	0
30.2.11	signalling.receptor kinases.leucine rich repeat XI	7 (0.97%)	2	1	0	1	2	0	0	1
17.2	hormone metabolism.auxin	6 (0.83%)	1	0	1	3	0	0	0	1
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	6 (0.83%)	1	0	1	3	0	0	0	1
17.4	hormone metabolism.cytokinin	6 (0.83%)	0	1	1	3	0	0	0	1
17.4.2	hormone metabolism.cytokinin.signal transduction	6 (0.83%)	0	1	1	3	0	0	0	1
27.3.64	RNA.regulation of transcription.PHOR1	6 (0.83%)	0	0	0	4	0	2	0	0
17.1	hormone metabolism.abscisic acid	5 (0.69%)	0	1	0	1	2	1	0	0
17.1.1	hormone metabolism.abscisic acid.synthesis-degradation	5 (0.69%)	0	1	0	1	2	1	0	0
27.1.1	RNA.processing.splicing	5 (0.69%)	1	0	0	2	2	0	0	0
30.4	signalling.phosphinositides	5 (0.69%)	2	1	0	0	1	0	0	1
31.3	cell.cycle	5 (0.69%)	0	1	0	0	3	0	0	1
33.3	development.squamosa promoter binding like (SPL)	5 (0.69%)	1	2	0	0	1	0	1	0
20.2.3	stress.abiotic.drought/salt	4 (0.55%)	0	1	0	0	2	1	0	0
20.2.99	stress.abiotic.unspecified	4 (0.55%)	4	0	0	0	0	0	0	0
21	redox	4 (0.55%)	0	0	0	1	2	1	0	0
21.4	redox.glutaredoxins	4 (0.55%)	0	0	0	1	2	1	0	0
26.2	misc.UDP glucosyl and glucoronyl transferases	4 (0.55%)	1	0	0	3	0	0	0	0
26.3	misc.gluco-, galacto- and mannosidases	4 (0.55%)	0	1	1	1	0	0	0	1
27.1.19	RNA.processing.ribonucleases	4 (0.55%)	0	2	1	0	0	1	0	0
27.3.37	RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family	4 (0.55%)	0	0	0	3	1	0	0	0
27.3.7	RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family	4 (0.55%)	0	1	0	2	1	0	0	0
27.3.8	RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family	4 (0.55%)	0	0	0	1	2	0	0	1
3.2	minor CHO metabolism.trehalose	4 (0.55%)	0	0	0	2	0	1	0	1
3.2.2	minor CHO metabolism.trehalose.TPP	4 (0.55%)	0	0	0	2	0	1	0	1
31.3.1	cell.cycle.peptidylprolyl isomerase	4 (0.55%)	0	1	0	0	2	0	0	1
31.4	cell.vesicle transport	4 (0.55%)	0	1	0	2	0	1	0	0
34.1	transport.p- and v-ATPases	4 (0.55%)	0	0	0	3	0	0	0	1
34.21	transport.calcium	4 (0.55%)	0	0	1	1	1	1	0	0
1	PS	3 (0.42%)	0	0	0	1	2	0	0	0
1.1	PS.lightreaction	3 (0.42%)	0	0	0	1	2	0	0	0
10.7	cell wall.modification	3 (0.42%)	1	0	0	0	0	1	1	0
12	N-metabolism	3 (0.42%)	0	0	0	2	1	0	0	0
15	metal handling	3 (0.42%)	0	0	0	0	2	0	0	1
15.2	metal handling.binding, chelation and storage	3 (0.42%)	0	0	0	0	2	0	0	1
20.1.7	stress.biotic.PR-proteins	3 (0.42%)	0	0	0	2	0	1	0	0
20.1.7.6	stress.biotic.PR-proteins.proteinase inhibitors	3 (0.42%)	0	0	0	2	0	1	0	0
20.1.7.6.1	stress.biotic.PR-proteins.proteinase inhibitors.trypsin inhibitor	3 (0.42%)	0	0	0	2	0	1	0	0
23	nucleotide metabolism	3 (0.42%)	0	0	0	1	1	1	0	0
26.7	misc.oxidases - copper, flavone etc	3 (0.42%)	0	1	0	1	0	0	1	0
27.1.2	RNA.processing.RNA helicase	3 (0.42%)	0	1	0	1	1	0	0	0
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	3 (0.42%)	0	0	1	0	0	0	1	1
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	3 (0.42%)	0	0	0	2	0	0	0	1
3.6	minor CHO metabolism.callose	3 (0.42%)	0	0	0	2	0	0	0	1
28	DNA	3 (0.42%)	0	0	0	1	2	0	0	0
29.2	protein.synthesis	3 (0.42%)	1	0	1	0	0	0	1	0
29.5.5	protein.degradation.serine protease	3 (0.42%)	0	0	0	1	1	1	0	0
30.11	signalling.light	3 (0.42%)	0	0	0	2	1	0	0	0
30.3	signalling.calcium	3 (0.42%)	0	0	0	0	2	0	1	0
1.1.5	PS.lightreaction.other electron carrier (ox/red)	2 (0.28%)	0	0	0	1	1	0	0	0
1.1.5.2	PS.lightreaction.other electron carrier (ox/red).ferredoxin	2 (0.28%)	0	0	0	1	1	0	0	0
12.4	N-metabolism.misc	2 (0.28%)	0	0	0	2	0	0	0	0
16	secondary metabolism	2 (0.28%)	1	0	0	0	0	0	0	1
17.5.2	hormone metabolism.ethylene.signal transduction	2 (0.28%)	0	0	0	1	0	0	0	1
17.8	hormone metabolism.salicylic acid	2 (0.28%)	0	0	0	0	1	1	0	0
17.8.1	hormone metabolism.salicylic acid.synthesis-degradation	2 (0.28%)	0	0	0	0	1	1	0	0
26.10	misc.cytochrome P450	2 (0.28%)	0	0	1	0	0	0	0	1
27.3.14	RNA.regulation of transcription.CCAAT box binding factor family, HAP2	2 (0.28%)	0	0	0	2	0	0	0	0
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	2 (0.28%)	0	0	0	1	1	0	0	0
27.3.52	RNA.regulation of transcription.Global transcription factor group	2 (0.28%)	0	1	0	0	0	0	0	1
27.3.60	RNA.regulation of transcription.NIN-like bZIP-related family	2 (0.28%)	0	0	1	0	1	0	0	0
28.1	DNA.synthesis/chromatin structure	2 (0.28%)	0	0	0	1	1	0	0	0
29.2.4	protein.synthesis.elongation	2 (0.28%)	1	0	1	0	0	0	0	0
29.3	protein.targeting	2 (0.28%)	1	0	0	0	1	0	0	0
29.5.11	protein.degradation.ubiquitin	2 (0.28%)	0	1	0	0	1	0	0	0
29.5.9	protein.degradation.AAA type	2 (0.28%)	1	0	0	1	0	0	0	0
29.7	protein.glycosylation	2 (0.28%)	0	1	0	0	1	0	0	0
30.8	signalling.misc	2 (0.28%)	1	0	0	0	1	0	0	0
34.10	transport.nucleotides	2 (0.28%)	0	0	0	0	1	0	1	0
34.4	transport.nitrate	2 (0.28%)	0	0	0	0	1	0	1	0
34.99	transport.misc	2 (0.28%)	0	0	0	0	1	0	0	1
1.1.1	PS.lightreaction.photosystem II	1 (0.14%)	0	0	0	0	1	0	0	0
1.1.1.2	PS.lightreaction.photosystem II.PSII polypeptide subunits	1 (0.14%)	0	0	0	0	1	0	0	0
2	major CHO metabolism	1 (0.14%)	0	0	0	0	1	0	0	0
9	mitochondrial electron transport / ATP synthesis	1 (0.14%)	0	0	0	0	0	0	1	0
10.4	cell wall.pectin synthesis	1 (0.14%)	0	1	0	0	0	0	0	0
10.4.3	cell wall.pectin synthesis.rhamnogalacturonan II	1 (0.14%)	0	1	0	0	0	0	0	0
10.4.3.6	cell wall.pectin synthesis.rhamnogalacturonan II.Xylose Transferase with Fucose Acceptor	1 (0.14%)	0	1	0	0	0	0	0	0
10.5	cell wall.cell wall proteins	1 (0.14%)	0	0	0	0	1	0	0	0
10.6	cell wall.degradation	1 (0.14%)	0	1	0	0	0	0	0	0
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	1 (0.14%)	0	1	0	0	0	0	0	0
2.2	major CHO metabolism.degradation	1 (0.14%)	0	0	0	0	1	0	0	0
9.9	mitochondrial electron transport / ATP synthesis.F1-ATPase	1 (0.14%)	0	0	0	0	0	0	1	0
10.8	cell wall.pectin*esterases	1 (0.14%)	0	1	0	0	0	0	0	0
10.8.1	cell wall.pectin*esterases.PME	1 (0.14%)	0	1	0	0	0	0	0	0
11	lipid metabolism	1 (0.14%)	0	0	1	0	0	0	0	0
11.4	lipid metabolism.TAG synthesis	1 (0.14%)	0	0	1	0	0	0	0	0
12.2	N-metabolism.ammonia metabolism	1 (0.14%)	0	0	0	0	1	0	0	0
12.2.1	N-metabolism.ammonia metabolism.glutamate synthase	1 (0.14%)	0	0	0	0	1	0	0	0
16.10	secondary metabolism.simple phenols	1 (0.14%)	0	0	0	0	0	0	0	1
16.8	secondary metabolism.flavonoids	1 (0.14%)	1	0	0	0	0	0	0	0
16.8.1	secondary metabolism.flavonoids.anthocyanins	1 (0.14%)	1	0	0	0	0	0	0	0
17.6	hormone metabolism.gibberelin	1 (0.14%)	0	0	0	1	0	0	0	0
17.6.1	hormone metabolism.gibberelin.synthesis-degradation	1 (0.14%)	0	0	0	1	0	0	0	0
2.2.2	major CHO metabolism.degradation.starch	1 (0.14%)	0	0	0	0	1	0	0	0
2.2.2.1	major CHO metabolism.degradation.starch.starch cleavage	1 (0.14%)	0	0	0	0	1	0	0	0
2.2.2.1.2	major CHO metabolism.degradation.starch.starch cleavage.beta amylase	1 (0.14%)	0	0	0	0	1	0	0	0
20.2.1	stress.abiotic.heat	1 (0.14%)	0	1	0	0	0	0	0	0
20.2.4	stress.abiotic.touch/wounding	1 (0.14%)	0	0	0	1	0	0	0	0
23.1	nucleotide metabolism.synthesis	1 (0.14%)	0	0	0	0	0	1	0	0
23.1.3	nucleotide metabolism.synthesis.PRS-PP	1 (0.14%)	0	0	0	0	0	1	0	0
23.2	nucleotide metabolism.degradation	1 (0.14%)	0	0	0	0	1	0	0	0
23.4	nucleotide metabolism.phosphotransfer and pyrophosphatases	1 (0.14%)	0	0	0	1	0	0	0	0
23.4.1	nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase	1 (0.14%)	0	0	0	1	0	0	0	0
26.12	misc.peroxidases	1 (0.14%)	0	0	1	0	0	0	0	0
26.13	misc.acid and other phosphatases	1 (0.14%)	0	0	0	0	1	0	0	0
26.14	misc.oxygenases	1 (0.14%)	0	0	0	0	0	0	1	0
26.4	misc.beta 1,3 glucan hydrolases	1 (0.14%)	0	0	1	0	0	0	0	0
26.4.1	misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase	1 (0.14%)	0	0	1	0	0	0	0	0
26.8	misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases	1 (0.14%)	0	0	1	0	0	0	0	0
27.2	RNA.transcription	1 (0.14%)	0	0	0	0	0	0	0	1
27.3.12	RNA.regulation of transcription.C3H zinc finger family	1 (0.14%)	0	0	0	0	1	0	0	0
27.3.21	RNA.regulation of transcription.GRAS transcription factor family	1 (0.14%)	0	0	0	1	0	0	0	0
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	1 (0.14%)	0	0	0	0	0	1	0	0
27.3.28	RNA.regulation of transcription.SBP,Squamosa promoter binding protein family	1 (0.14%)	0	0	0	0	0	0	1	0
27.3.34	RNA.regulation of transcription.Orphan family	1 (0.14%)	1	0	0	0	0	0	0	0
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	1 (0.14%)	1	0	0	0	0	0	0	0
27.3.50	RNA.regulation of transcription.General Transcription	1 (0.14%)	0	0	0	0	0	1	0	0
27.3.66	RNA.regulation of transcription.Psudo ARR transcription factor family	1 (0.14%)	0	0	0	1	0	0	0	0
27.3.71	RNA.regulation of transcription.SNF7	1 (0.14%)	0	0	0	0	0	0	1	0
27.4	RNA.RNA binding	1 (0.14%)	0	0	0	0	0	0	0	1
28.2	DNA.repair	1 (0.14%)	0	0	0	0	1	0	0	0
29.2.1.2.1.11	protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S11	1 (0.14%)	0	0	0	1	0	0	0	0
29.2.1.2.1.17	protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S17	1 (0.14%)	0	1	0	0	0	0	0	0
29.2.1.2.1.2	protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S2	1 (0.14%)	0	0	0	0	1	0	0	0
29.2.1.2.2.24	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L24	1 (0.14%)	0	0	0	0	1	0	0	0
29.2.1.2.2.34	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34	1 (0.14%)	0	0	0	0	1	0	0	0
29.2.1.99.99	protein.synthesis.ribosomal protein.unknown.unknown	1 (0.14%)	0	0	0	0	1	0	0	0
29.2.2	protein.synthesis.ribosome biogenesis	1 (0.14%)	0	0	0	0	0	0	1	0
29.2.2.50	protein.synthesis.ribosome biogenesis.BRIX	1 (0.14%)	0	0	0	0	0	0	1	0
29.3.3	protein.targeting.chloroplast	1 (0.14%)	1	0	0	0	0	0	0	0
29.3.99	protein.targeting.unknown	1 (0.14%)	0	0	0	0	1	0	0	0
29.4.1.59	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX	1 (0.14%)	1	0	0	0	0	0	0	0
29.5.11.3	protein.degradation.ubiquitin.E2	1 (0.14%)	0	0	0	0	1	0	0	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	1 (0.14%)	0	0	1	0	0	0	0	0
29.5.11.4.5.2	protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ	1 (0.14%)	0	0	0	0	0	0	1	0
30.1	signalling.in sugar and nutrient physiology	1 (0.14%)	0	1	0	0	0	0	0	0
30.2.16	signalling.receptor kinases.Catharanthus roseus-like RLK1	1 (0.14%)	0	0	0	0	0	0	0	1
30.2.17	signalling.receptor kinases.DUF 26	1 (0.14%)	0	0	1	0	0	0	0	0
30.2.3	signalling.receptor kinases.leucine rich repeat III	1 (0.14%)	0	0	0	0	1	0	0	0
30.4.1	signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase	1 (0.14%)	0	0	0	0	1	0	0	0
30.4.4	signalling.phosphinositides.phosphoinositide phospholipase C	1 (0.14%)	1	0	0	0	0	0	0	0
30.5	signalling.G-proteins	1 (0.14%)	0	0	0	0	0	0	1	0
34.14	transport.unspecified cations	1 (0.14%)	0	0	0	1	0	0	0	0
34.15	transport.potassium	1 (0.14%)	1	0	0	0	0	0	0	0
34.19	transport.Major Intrinsic Proteins	1 (0.14%)	0	0	0	0	0	1	0	0
34.19.2	transport.Major Intrinsic Proteins.TIP	1 (0.14%)	0	0	0	0	0	1	0	0