PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_27
Name: ATAIB;ATNIG1
Description: N/A

#Associated genes: 484
#Associated MapMan terms: 174

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MapMan	Description	#Associated genes	gma	sly
27	RNA	122 (25.21%)	106	16
27.3	RNA.regulation of transcription	122 (25.21%)	106	16
29	protein	37 (7.64%)	28	9
29.4	protein.postranslational modification	30 (6.20%)	24	6
30	signalling	23 (4.75%)	17	6
17	hormone metabolism	20 (4.13%)	17	3
26	misc	18 (3.72%)	16	2
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	18 (3.72%)	16	2
31	cell	18 (3.72%)	14	4
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	14 (2.89%)	12	2
33	development	14 (2.89%)	13	1
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	13 (2.69%)	12	1
10	cell wall	11 (2.27%)	8	3
31.1	cell.organisation	11 (2.27%)	10	1
34	transport	11 (2.27%)	10	1
11	lipid metabolism	10 (2.07%)	8	2
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	10 (2.07%)	9	1
30.2	signalling.receptor kinases	10 (2.07%)	8	2
33.99	development.unspecified	10 (2.07%)	9	1
16	secondary metabolism	9 (1.86%)	5	4
29.4.1	protein.postranslational modification.kinase	9 (1.86%)	6	3
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	8 (1.65%)	6	2
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	8 (1.65%)	5	3
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	8 (1.65%)	5	3
17.2	hormone metabolism.auxin	7 (1.45%)	6	1
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	7 (1.45%)	5	2
30.2.11	signalling.receptor kinases.leucine rich repeat XI	7 (1.45%)	6	1
2	major CHO metabolism	6 (1.24%)	5	1
2.2	major CHO metabolism.degradation	6 (1.24%)	5	1
2.2.2	major CHO metabolism.degradation.starch	6 (1.24%)	5	1
26.10	misc.cytochrome P450	6 (1.24%)	6	0
27.3.5	RNA.regulation of transcription.ARR	6 (1.24%)	6	0
27.3.99	RNA.regulation of transcription.unclassified	6 (1.24%)	5	1
1	PS	5 (1.03%)	5	0
1.1	PS.lightreaction	5 (1.03%)	5	0
10.5	cell wall.cell wall proteins	5 (1.03%)	4	1
10.5.5	cell wall.cell wall proteins.RGP	5 (1.03%)	4	1
15	metal handling	5 (1.03%)	3	2
15.2	metal handling.binding, chelation and storage	5 (1.03%)	3	2
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	5 (1.03%)	4	1
17.5	hormone metabolism.ethylene	5 (1.03%)	5	0
17.5.2	hormone metabolism.ethylene.signal transduction	5 (1.03%)	5	0
26.2	misc.UDP glucosyl and glucoronyl transferases	5 (1.03%)	5	0
27.3.37	RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family	5 (1.03%)	4	1
30.11	signalling.light	5 (1.03%)	3	2
34.16	transport.ABC transporters and multidrug resistance systems	5 (1.03%)	5	0
1.1.1	PS.lightreaction.photosystem II	4 (0.83%)	4	0
10.6	cell wall.degradation	4 (0.83%)	2	2
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	4 (0.83%)	2	2
11.1	lipid metabolism.FA synthesis and FA elongation	4 (0.83%)	3	1
16.1	secondary metabolism.isoprenoids	4 (0.83%)	2	2
16.8	secondary metabolism.flavonoids	4 (0.83%)	2	2
17.4	hormone metabolism.cytokinin	4 (0.83%)	3	1
20	stress	4 (0.83%)	3	1
20.2	stress.abiotic	4 (0.83%)	3	1
27.3.9	RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family	4 (0.83%)	4	0
30.3	signalling.calcium	4 (0.83%)	4	0
33.1	development.storage proteins	4 (0.83%)	4	0
11.1.1	lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation	3 (0.62%)	2	1
11.1.1.1	lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.homomeric Enzyme	3 (0.62%)	2	1
14.3	S-assimilation.sulfite redox	3 (0.62%)	2	1
2.2.2.1	major CHO metabolism.degradation.starch.starch cleavage	3 (0.62%)	2	1
2.2.2.1.2	major CHO metabolism.degradation.starch.starch cleavage.beta amylase	3 (0.62%)	2	1
3	minor CHO metabolism	3 (0.62%)	3	0
14	S-assimilation	3 (0.62%)	2	1
27.3.29	RNA.regulation of transcription.TCP transcription factor family	3 (0.62%)	3	0
27.3.64	RNA.regulation of transcription.PHOR1	3 (0.62%)	3	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	3 (0.62%)	3	0
27.3.7	RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family	3 (0.62%)	2	1
29.5	protein.degradation	3 (0.62%)	2	1
29.5.5	protein.degradation.serine protease	3 (0.62%)	2	1
31.4	cell.vesicle transport	3 (0.62%)	1	2
1.1.1.1	PS.lightreaction.photosystem II.LHC-II	2 (0.41%)	2	0
1.1.1.2	PS.lightreaction.photosystem II.PSII polypeptide subunits	2 (0.41%)	2	0
3.7	minor CHO metabolism.sugar kinases	2 (0.41%)	2	0
11.9	lipid metabolism.lipid degradation	2 (0.41%)	2	0
16.1.2	secondary metabolism.isoprenoids.mevalonate pathway	2 (0.41%)	2	0
16.1.2.3	secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA reductase	2 (0.41%)	2	0
16.8.2	secondary metabolism.flavonoids.chalcones	2 (0.41%)	1	1
16.8.3	secondary metabolism.flavonoids.dihydroflavonols	2 (0.41%)	1	1
17.4.1	hormone metabolism.cytokinin.synthesis-degradation	2 (0.41%)	1	1
17.4.2	hormone metabolism.cytokinin.signal transduction	2 (0.41%)	2	0
17.6	hormone metabolism.gibberelin	2 (0.41%)	1	1
17.6.2	hormone metabolism.gibberelin.signal transduction	2 (0.41%)	1	1
2.2.2.3	major CHO metabolism.degradation.starch.glucan water dikinase	2 (0.41%)	2	0
20.2.1	stress.abiotic.heat	2 (0.41%)	2	0
26.7	misc.oxidases - copper, flavone etc	2 (0.41%)	2	0
27.3.1	RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family	2 (0.41%)	2	0
27.3.15	RNA.regulation of transcription.CCAAT box binding factor family, HAP3	2 (0.41%)	2	0
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	2 (0.41%)	2	0
27.3.44	RNA.regulation of transcription.Chromatin Remodeling Factors	2 (0.41%)	2	0
27.3.8	RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family	2 (0.41%)	2	0
28	DNA	2 (0.41%)	1	1
28.1	DNA.synthesis/chromatin structure	2 (0.41%)	1	1
29.2	protein.synthesis	2 (0.41%)	1	1
29.2.3	protein.synthesis.initiation	2 (0.41%)	1	1
29.3	protein.targeting	2 (0.41%)	1	1
29.3.4	protein.targeting.secretory pathway	2 (0.41%)	1	1
29.3.4.99	protein.targeting.secretory pathway.unspecified	2 (0.41%)	1	1
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	2 (0.41%)	1	1
30.2.3	signalling.receptor kinases.leucine rich repeat III	2 (0.41%)	2	0
30.4	signalling.phosphinositides	2 (0.41%)	1	1
30.4.1	signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase	2 (0.41%)	1	1
31.2	cell.division	2 (0.41%)	2	0
31.3	cell.cycle	2 (0.41%)	1	1
34.19	transport.Major Intrinsic Proteins	2 (0.41%)	2	0
34.19.2	transport.Major Intrinsic Proteins.TIP	2 (0.41%)	2	0
34.99	transport.misc	2 (0.41%)	2	0
1.1.5	PS.lightreaction.other electron carrier (ox/red)	1 (0.21%)	1	0
1.1.5.2	PS.lightreaction.other electron carrier (ox/red).ferredoxin	1 (0.21%)	1	0
10.2.1	cell wall.cellulose synthesis.cellulose synthase	1 (0.21%)	1	0
11.1.7	lipid metabolism.FA synthesis and FA elongation.ACP thioesterase	1 (0.21%)	1	0
11.10.2	lipid metabolism.glycolipid synthesis.DGDG synthase	1 (0.21%)	1	0
11.8.1	lipid metabolism.exotics (steroids, squalene etc).sphingolipids	1 (0.21%)	1	0
11.9.1	lipid metabolism.lipid degradation.palmitoyl[protein] hydrolase	1 (0.21%)	1	0
11.9.3	lipid metabolism.lipid degradation.lysophospholipases	1 (0.21%)	1	0
11.9.3.4	lipid metabolism.lipid degradation.lysophospholipases.phospholipase A2	1 (0.21%)	1	0
13.2.3	amino acid metabolism.degradation.aspartate family	1 (0.21%)	0	1
13.2.3.5	amino acid metabolism.degradation.aspartate family.lysine	1 (0.21%)	0	1
16.1.1	secondary metabolism.isoprenoids.non-mevalonate pathway	1 (0.21%)	0	1
16.1.1.7	secondary metabolism.isoprenoids.non-mevalonate pathway.HDR	1 (0.21%)	0	1
16.1.5	secondary metabolism.isoprenoids.terpenoids	1 (0.21%)	0	1
16.2.1	secondary metabolism.phenylpropanoids.lignin biosynthesis	1 (0.21%)	1	0
16.2.1.1	secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL	1 (0.21%)	1	0
16.8.3.1	secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase	1 (0.21%)	1	0
17.1.1.1.10	hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase	1 (0.21%)	0	1
17.1.3	hormone metabolism.abscisic acid.induced-regulated-responsive-activated	1 (0.21%)	1	0
17.2.1	hormone metabolism.auxin.synthesis-degradation	1 (0.21%)	1	0
17.2.2	hormone metabolism.auxin.signal transduction	1 (0.21%)	1	0
17.7.2	hormone metabolism.jasmonate.signal transduction	1 (0.21%)	1	0
2.2.2.4	major CHO metabolism.degradation.starch.D enzyme	1 (0.21%)	1	0
20.2.3	stress.abiotic.drought/salt	1 (0.21%)	1	0
20.2.99	stress.abiotic.unspecified	1 (0.21%)	0	1
23.3.1	nucleotide metabolism.salvage.phosphoribosyltransferases	1 (0.21%)	1	0
23.3.1.1	nucleotide metabolism.salvage.phosphoribosyltransferases.aprt	1 (0.21%)	1	0
27.3.12	RNA.regulation of transcription.C3H zinc finger family	1 (0.21%)	0	1
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	1 (0.21%)	1	0
27.3.21	RNA.regulation of transcription.GRAS transcription factor family	1 (0.21%)	0	1
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	1 (0.21%)	1	0
27.3.4	RNA.regulation of transcription.ARF, Auxin Response Factor family	1 (0.21%)	1	0
27.3.42	RNA.regulation of transcription.Bromodomain proteins	1 (0.21%)	1	0
27.3.50	RNA.regulation of transcription.General Transcription	1 (0.21%)	1	0
27.3.59	RNA.regulation of transcription.Methyl binding domain proteins	1 (0.21%)	0	1
27.3.63	RNA.regulation of transcription.PHD finger transcription factor	1 (0.21%)	1	0
27.3.66	RNA.regulation of transcription.Psudo ARR transcription factor family	1 (0.21%)	1	0
29.4.1.56	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI	1 (0.21%)	1	0
3.2	minor CHO metabolism.trehalose	1 (0.21%)	1	0
10.2	cell wall.cellulose synthesis	1 (0.21%)	1	0
10.7	cell wall.modification	1 (0.21%)	1	0
11.10	lipid metabolism.glycolipid synthesis	1 (0.21%)	1	0
11.3	lipid metabolism.Phospholipid synthesis	1 (0.21%)	0	1
11.4	lipid metabolism.TAG synthesis	1 (0.21%)	1	0
11.8	lipid metabolism.exotics(steroids, squalene etc)	1 (0.21%)	1	0
13.2	amino acid metabolism.degradation	1 (0.21%)	0	1
16.2	secondary metabolism.phenylpropanoids	1 (0.21%)	1	0
17.1	hormone metabolism.abscisic acid	1 (0.21%)	1	0
17.7	hormone metabolism.jasmonate	1 (0.21%)	1	0
3.2.3	minor CHO metabolism.trehalose.potential TPS/TPP	1 (0.21%)	1	0
13	amino acid metabolism	1 (0.21%)	0	1
19	tetrapyrrole synthesis	1 (0.21%)	1	0
19.16	tetrapyrrole synthesis.chlorophyll b synthase	1 (0.21%)	1	0
23	nucleotide metabolism	1 (0.21%)	1	0
23.3	nucleotide metabolism.salvage	1 (0.21%)	1	0
24	Biodegradation of Xenobiotics	1 (0.21%)	0	1
26.12	misc.peroxidases	1 (0.21%)	1	0
26.13	misc.acid and other phosphatases	1 (0.21%)	1	0
26.21	misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	1 (0.21%)	1	0
26.22	misc.short chain dehydrogenase/reductase (SDR)	1 (0.21%)	0	1
26.9	misc.glutathione S transferases	1 (0.21%)	0	1
30.2.17	signalling.receptor kinases.DUF 26	1 (0.21%)	0	1
30.5	signalling.G-proteins	1 (0.21%)	0	1
30.7	signalling.14-3-3 proteins	1 (0.21%)	1	0
34.13	transport.peptides and oligopeptides	1 (0.21%)	0	1
34.9	transport.metabolite transporters at the mitochondrial membrane	1 (0.21%)	1	0