PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_22
Name: BES1
Description: A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana

#Associated genes: 261
#Associated MapMan terms: 119

Show species without binding site experiments

Click table-header(s) to enable sorting

MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	45 (17.24%)	5	3	1	12	9	7	4	4
27.3	RNA.regulation of transcription	37 (14.18%)	5	2	1	10	7	6	3	3
29	protein	22 (8.43%)	1	0	0	9	4	3	3	2
29.4	protein.postranslational modification	15 (5.75%)	0	0	0	7	1	3	2	2
31	cell	11 (4.21%)	2	4	0	1	3	0	1	0
30	signalling	9 (3.45%)	0	2	0	0	2	2	2	1
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	7 (2.68%)	0	0	0	3	3	1	0	0
3	minor CHO metabolism	6 (2.30%)	0	2	0	1	2	0	0	1
15	metal handling	6 (2.30%)	0	1	0	1	2	0	0	2
15.2	metal handling.binding, chelation and storage	6 (2.30%)	0	1	0	1	2	0	0	2
27.1	RNA.processing	6 (2.30%)	0	1	0	1	2	1	1	0
33	development	6 (2.30%)	1	0	1	0	2	1	0	1
33.99	development.unspecified	6 (2.30%)	1	0	1	0	2	1	0	1
3.6	minor CHO metabolism.callose	5 (1.92%)	0	1	0	1	2	0	0	1
9	mitochondrial electron transport / ATP synthesis	5 (1.92%)	0	0	1	1	0	0	0	3
34	transport	5 (1.92%)	0	1	1	1	1	0	0	1
17.1.1.1.10	hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase	4 (1.53%)	0	0	1	1	1	0	0	1
20	stress	4 (1.53%)	0	0	0	1	2	1	0	0
20.2	stress.abiotic	4 (1.53%)	0	0	0	1	2	1	0	0
21	redox	4 (1.53%)	0	0	1	1	2	0	0	0
26	misc	4 (1.53%)	0	1	0	2	0	0	1	0
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	4 (1.53%)	0	0	0	2	1	1	0	0
28	DNA	4 (1.53%)	0	0	0	3	0	0	1	0
28.99	DNA.unspecified	4 (1.53%)	0	0	0	3	0	0	1	0
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	4 (1.53%)	0	0	0	0	1	1	0	2
31.3	cell.cycle	4 (1.53%)	2	2	0	0	0	0	0	0
1	PS	3 (1.15%)	0	0	1	0	0	0	2	0
1.1	PS.lightreaction	3 (1.15%)	0	0	1	0	0	0	2	0
9.6	mitochondrial electron transport / ATP synthesis.cytochrome c	3 (1.15%)	0	0	1	0	0	0	0	2
10	cell wall	3 (1.15%)	0	0	0	0	3	0	0	0
16	secondary metabolism	3 (1.15%)	0	0	1	2	0	0	0	0
18	Co-factor and vitamine metabolism	3 (1.15%)	0	0	0	0	1	0	1	1
29.3	protein.targeting	3 (1.15%)	0	0	0	1	2	0	0	0
29.3.4	protein.targeting.secretory pathway	3 (1.15%)	0	0	0	1	2	0	0	0
29.3.4.99	protein.targeting.secretory pathway.unspecified	3 (1.15%)	0	0	0	1	2	0	0	0
29.4.1	protein.postranslational modification.kinase	3 (1.15%)	0	0	0	2	0	0	0	1
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	3 (1.15%)	0	0	0	2	0	0	0	1
30.3	signalling.calcium	3 (1.15%)	0	0	0	0	1	1	0	1
30.5	signalling.G-proteins	3 (1.15%)	0	0	0	0	1	1	1	0
31.1	cell.organisation	3 (1.15%)	0	1	0	1	1	0	0	0
1.1.40	PS.lightreaction.cyclic electron flow-chlororespiration	2 (0.77%)	0	0	0	0	0	0	2	0
10.5	cell wall.cell wall proteins	2 (0.77%)	0	0	0	0	2	0	0	0
10.5.4	cell wall.cell wall proteins.HRGP	2 (0.77%)	0	0	0	0	2	0	0	0
11	lipid metabolism	2 (0.77%)	0	0	0	1	1	0	0	0
11.7	lipid metabolism.unassigned	2 (0.77%)	0	0	0	1	1	0	0	0
16.1	secondary metabolism.isoprenoids	2 (0.77%)	0	0	0	2	0	0	0	0
16.1.4	secondary metabolism.isoprenoids.carotenoids	2 (0.77%)	0	0	0	2	0	0	0	0
16.1.4.5	secondary metabolism.isoprenoids.carotenoids.lycopene beta cyclase	2 (0.77%)	0	0	0	2	0	0	0	0
17	hormone metabolism	2 (0.77%)	1	0	0	0	0	0	0	1
20.2.99	stress.abiotic.unspecified	2 (0.77%)	0	0	0	1	0	1	0	0
21.3	redox.heme	2 (0.77%)	0	0	1	1	0	0	0	0
21.4	redox.glutaredoxins	2 (0.77%)	0	0	0	0	2	0	0	0
26.10	misc.cytochrome P450	2 (0.77%)	0	1	0	0	0	0	1	0
27.1.1	RNA.processing.splicing	2 (0.77%)	0	0	0	0	2	0	0	0
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	2 (0.77%)	1	1	0	0	0	0	0	0
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	2 (0.77%)	1	0	0	1	0	0	0	0
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	2 (0.77%)	0	1	0	0	1	0	0	0
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	2 (0.77%)	0	0	0	1	0	1	0	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	2 (0.77%)	0	0	0	1	0	0	0	1
27.3.64	RNA.regulation of transcription.PHOR1	2 (0.77%)	0	0	0	0	1	1	0	0
27.3.99	RNA.regulation of transcription.unclassified	2 (0.77%)	0	0	0	0	0	0	1	1
29.2	protein.synthesis	2 (0.77%)	0	0	0	0	1	0	1	0
29.2.1.2.2.34	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34	2 (0.77%)	0	0	1	0	1	0	0	0
29.2.4	protein.synthesis.elongation	2 (0.77%)	0	0	0	0	1	0	1	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	2 (0.77%)	0	0	0	1	0	1	0	0
30.4	signalling.phosphinositides	2 (0.77%)	0	1	0	0	0	0	1	0
31.3.1	cell.cycle.peptidylprolyl isomerase	2 (0.77%)	1	1	0	0	0	0	0	0
31.4	cell.vesicle transport	2 (0.77%)	0	1	0	0	1	0	0	0
31.5	cell.cell death	2 (0.77%)	0	0	0	0	1	0	1	0
31.5.1	cell.cell death.plants	2 (0.77%)	0	0	0	0	1	0	1	0
1.1.5	PS.lightreaction.other electron carrier (ox/red)	1 (0.38%)	0	0	1	0	0	0	0	0
1.1.5.2	PS.lightreaction.other electron carrier (ox/red).ferredoxin	1 (0.38%)	0	0	1	0	0	0	0	0
10.7	cell wall.modification	1 (0.38%)	0	0	0	0	1	0	0	0
13	amino acid metabolism	1 (0.38%)	1	0	0	0	0	0	0	0
13.2	amino acid metabolism.degradation	1 (0.38%)	1	0	0	0	0	0	0	0
13.2.2	amino acid metabolism.degradation.glutamate family	1 (0.38%)	1	0	0	0	0	0	0	0
13.2.2.3	amino acid metabolism.degradation.glutamate family.arginine	1 (0.38%)	1	0	0	0	0	0	0	0
16.2	secondary metabolism.phenylpropanoids	1 (0.38%)	0	0	1	0	0	0	0	0
17.2	hormone metabolism.auxin	1 (0.38%)	0	0	0	0	0	0	0	1
17.2.2	hormone metabolism.auxin.signal transduction	1 (0.38%)	0	0	0	0	0	0	0	1
17.3	hormone metabolism.brassinosteroid	1 (0.38%)	1	0	0	0	0	0	0	0
17.3.2	hormone metabolism.brassinosteroid.signal transduction	1 (0.38%)	1	0	0	0	0	0	0	0
17.3.2.1	hormone metabolism.brassinosteroid.signal transduction.BRI	1 (0.38%)	1	0	0	0	0	0	0	0
20.2.1	stress.abiotic.heat	1 (0.38%)	0	0	0	0	1	0	0	0
26.7	misc.oxidases - copper, flavone etc	1 (0.38%)	0	0	0	1	0	0	0	0
26.8	misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases	1 (0.38%)	0	0	0	1	0	0	0	0
27.1.19	RNA.processing.ribonucleases	1 (0.38%)	0	0	0	1	0	0	0	0
27.1.2	RNA.processing.RNA helicase	1 (0.38%)	0	1	0	0	0	0	0	0
27.2	RNA.transcription	1 (0.38%)	0	0	0	0	0	0	0	1
27.3.1	RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family	1 (0.38%)	0	0	0	1	0	0	0	0
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	1 (0.38%)	0	0	0	0	0	0	0	1
27.3.21	RNA.regulation of transcription.GRAS transcription factor family	1 (0.38%)	0	0	0	0	0	1	0	0
27.3.27	RNA.regulation of transcription.NAC domain transcription factor family	1 (0.38%)	0	0	0	0	1	0	0	0
27.3.29	RNA.regulation of transcription.TCP transcription factor family	1 (0.38%)	0	0	0	1	0	0	0	0
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	1 (0.38%)	0	0	0	0	0	0	1	0
27.3.4	RNA.regulation of transcription.ARF, Auxin Response Factor family	1 (0.38%)	0	0	0	0	0	1	0	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	1 (0.38%)	1	0	0	0	0	0	0	0
27.3.68	RNA.regulation of transcription.PWWP domain protein	1 (0.38%)	1	0	0	0	0	0	0	0
27.3.7	RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family	1 (0.38%)	0	0	0	0	0	0	1	0
3.8	minor CHO metabolism.galactose	1 (0.38%)	0	1	0	0	0	0	0	0
9.1	mitochondrial electron transport / ATP synthesis.NADH-DH	1 (0.38%)	0	0	0	1	0	0	0	0
9.7	mitochondrial electron transport / ATP synthesis.cytochrome c oxidase	1 (0.38%)	0	0	0	0	0	0	0	1
27.4	RNA.RNA binding	1 (0.38%)	0	0	0	1	0	0	0	0
29.1	protein.aa activation	1 (0.38%)	0	0	0	1	0	0	0	0
29.1.3	protein.aa activation.threonine-tRNA ligase	1 (0.38%)	0	0	0	1	0	0	0	0
29.2.1.2.1.13	protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S13	1 (0.38%)	0	0	0	1	0	0	0	0
29.2.1.2.1.8	protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S8	1 (0.38%)	0	0	0	1	0	0	0	0
29.2.1.99.99	protein.synthesis.ribosomal protein.unknown.unknown	1 (0.38%)	0	0	0	0	0	1	0	0
29.6	protein.folding	1 (0.38%)	1	0	0	0	0	0	0	0
3.8.1	minor CHO metabolism.galactose.galactokinases	1 (0.38%)	0	1	0	0	0	0	0	0
30.11	signalling.light	1 (0.38%)	0	1	0	0	0	0	0	0
30.4.1	signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase	1 (0.38%)	0	0	0	0	0	0	1	0
34.12	transport.metal	1 (0.38%)	0	0	0	0	0	0	0	1
34.19	transport.Major Intrinsic Proteins	1 (0.38%)	0	0	1	0	0	0	0	0
34.19.2	transport.Major Intrinsic Proteins.TIP	1 (0.38%)	0	0	1	0	0	0	0	0
34.2	transport.sugars	1 (0.38%)	0	1	0	0	0	0	0	0
34.4	transport.nitrate	1 (0.38%)	0	0	0	1	0	0	0	0
34.99	transport.misc	1 (0.38%)	0	0	0	0	1	0	0	0
9.1.2	mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear	1 (0.38%)	0	0	0	1	0	0	0	0