PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_199
Name: AT1G69170;SPL9;SPL15;SPL13A;SPL13B
Description: N/A

#Associated genes: 360
#Associated MapMan terms: 122

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	61 (16.94%)	4	2	1	19	15	11	4	5
27.3	RNA.regulation of transcription	52 (14.44%)	3	2	1	17	12	10	3	4
17	hormone metabolism	24 (6.67%)	0	0	4	5	8	3	2	2
29	protein	24 (6.67%)	2	1	3	8	4	1	1	4
10	cell wall	23 (6.39%)	4	3	0	4	6	0	1	5
17.2	hormone metabolism.auxin	21 (5.83%)	0	0	4	5	7	2	1	2
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	21 (5.83%)	0	0	4	5	7	2	1	2
34	transport	21 (5.83%)	2	2	3	4	2	2	3	3
30	signalling	16 (4.44%)	4	4	0	5	1	1	1	0
29.4	protein.postranslational modification	14 (3.89%)	1	1	2	7	2	0	0	1
21	redox	13 (3.61%)	2	2	2	2	2	1	2	0
21.4	redox.glutaredoxins	13 (3.61%)	2	2	2	2	2	1	2	0
26	misc	12 (3.33%)	0	0	1	3	1	3	2	2
27.3.52	RNA.regulation of transcription.Global transcription factor group	12 (3.33%)	0	1	0	5	2	1	1	2
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	12 (3.33%)	0	0	0	6	4	1	0	1
10.6	cell wall.degradation	11 (3.06%)	1	2	0	2	2	0	1	3
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	10 (2.78%)	1	2	0	2	2	0	1	2
33	development	10 (2.78%)	1	1	1	3	2	0	1	1
31	cell	9 (2.50%)	1	3	0	2	0	1	0	2
10.7	cell wall.modification	8 (2.22%)	2	1	0	1	3	0	0	1
30.3	signalling.calcium	8 (2.22%)	2	2	0	2	0	1	1	0
31.1	cell.organisation	7 (1.94%)	1	3	0	0	0	1	0	2
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	6 (1.67%)	0	0	0	1	2	3	0	0
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	6 (1.67%)	0	0	0	5	0	1	0	0
11	lipid metabolism	5 (1.39%)	0	0	0	3	0	1	0	1
27.3.21	RNA.regulation of transcription.GRAS transcription factor family	5 (1.39%)	0	0	0	2	2	1	0	0
27.3.99	RNA.regulation of transcription.unclassified	5 (1.39%)	0	0	0	2	1	0	1	1
27.4	RNA.RNA binding	5 (1.39%)	0	0	0	0	2	1	1	1
29.5	protein.degradation	5 (1.39%)	0	0	0	1	1	1	1	1
33.3	development.squamosa promoter binding like (SPL)	5 (1.39%)	0	0	1	2	0	0	1	1
33.99	development.unspecified	5 (1.39%)	1	1	0	1	2	0	0	0
34.1	transport.p- and v-ATPases	5 (1.39%)	0	1	1	0	0	1	0	2
34.99	transport.misc	5 (1.39%)	0	0	0	1	1	1	2	0
26.10	misc.cytochrome P450	4 (1.11%)	0	0	0	2	0	1	1	0
26.4	misc.beta 1,3 glucan hydrolases	4 (1.11%)	0	0	1	1	1	0	1	0
29.4.1	protein.postranslational modification.kinase	4 (1.11%)	0	0	0	3	0	0	0	1
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	4 (1.11%)	0	0	0	3	0	0	0	1
30.2	signalling.receptor kinases	4 (1.11%)	0	0	0	3	1	0	0	0
34.15	transport.potassium	4 (1.11%)	1	0	1	1	0	0	1	0
1	PS	3 (0.83%)	0	0	0	0	1	0	1	1
3	minor CHO metabolism	3 (0.83%)	0	0	1	1	0	0	1	0
10.5	cell wall.cell wall proteins	3 (0.83%)	1	0	0	1	0	0	0	1
11.3	lipid metabolism.Phospholipid synthesis	3 (0.83%)	0	0	0	2	0	0	0	1
15	metal handling	3 (0.83%)	0	1	0	2	0	0	0	0
26.3	misc.gluco-, galacto- and mannosidases	3 (0.83%)	0	0	0	0	0	1	0	2
26.4.1	misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase	3 (0.83%)	0	0	0	1	1	0	1	0
27.1	RNA.processing	3 (0.83%)	0	0	0	2	1	0	0	0
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	3 (0.83%)	0	0	1	0	1	1	0	0
1.3	PS.calvin cycle	2 (0.56%)	0	0	0	0	1	0	0	1
1.3.5	PS.calvin cycle.TPI	2 (0.56%)	0	0	0	0	1	0	0	1
10.5.5	cell wall.cell wall proteins.RGP	2 (0.56%)	0	0	0	1	0	0	0	1
15.2	metal handling.binding, chelation and storage	2 (0.56%)	0	0	0	2	0	0	0	0
17.5	hormone metabolism.ethylene	2 (0.56%)	0	0	0	0	1	0	1	0
17.5.2	hormone metabolism.ethylene.signal transduction	2 (0.56%)	0	0	0	0	1	0	1	0
20	stress	2 (0.56%)	0	0	0	0	2	0	0	0
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	2 (0.56%)	1	1	0	0	0	0	0	0
27.3.23	RNA.regulation of transcription.HSF,Heat-shock transcription factor family	2 (0.56%)	0	0	0	0	1	0	0	1
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	2 (0.56%)	0	0	0	0	1	0	1	0
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	2 (0.56%)	1	0	0	0	0	1	0	0
3.2	minor CHO metabolism.trehalose	2 (0.56%)	0	0	0	1	0	0	1	0
28	DNA	2 (0.56%)	0	1	0	0	0	1	0	0
29.1	protein.aa activation	2 (0.56%)	0	0	0	0	0	0	0	2
29.3	protein.targeting	2 (0.56%)	0	0	1	0	1	0	0	0
29.3.4	protein.targeting.secretory pathway	2 (0.56%)	0	0	1	0	1	0	0	0
3.2.2	minor CHO metabolism.trehalose.TPP	2 (0.56%)	0	0	0	1	0	0	1	0
30.2.11	signalling.receptor kinases.leucine rich repeat XI	2 (0.56%)	0	0	0	2	0	0	0	0
30.6	signalling.MAP kinases	2 (0.56%)	1	1	0	0	0	0	0	0
31.4	cell.vesicle transport	2 (0.56%)	0	0	0	2	0	0	0	0
34.12	transport.metal	2 (0.56%)	0	1	1	0	0	0	0	0
34.16	transport.ABC transporters and multidrug resistance systems	2 (0.56%)	0	0	0	1	1	0	0	0
34.19	transport.Major Intrinsic Proteins	2 (0.56%)	0	0	0	1	0	0	0	1
34.19.2	transport.Major Intrinsic Proteins.TIP	2 (0.56%)	0	0	0	1	0	0	0	1
1.1	PS.lightreaction	1 (0.28%)	0	0	0	0	0	0	1	0
1.1.40	PS.lightreaction.cyclic electron flow-chlororespiration	1 (0.28%)	0	0	0	0	0	0	1	0
10.1	cell wall.precursor synthesis	1 (0.28%)	0	0	0	0	1	0	0	0
10.1.6	cell wall.precursor synthesis.GAE	1 (0.28%)	0	0	0	0	1	0	0	0
10.5.1	cell wall.cell wall proteins.AGPs	1 (0.28%)	1	0	0	0	0	0	0	0
10.5.1.1	cell wall.cell wall proteins.AGPs.AGP	1 (0.28%)	1	0	0	0	0	0	0	0
10.6.1	cell wall.degradation.cellulases and beta -1,4-glucanases	1 (0.28%)	0	0	0	0	0	0	0	1
11.1	lipid metabolism.FA synthesis and FA elongation	1 (0.28%)	0	0	0	0	0	1	0	0
11.1.9	lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase	1 (0.28%)	0	0	0	0	0	1	0	0
11.5	lipid metabolism.glyceral metabolism	1 (0.28%)	0	0	0	1	0	0	0	0
11.5.2	lipid metabolism.glyceral metabolism.Glycerol-3-phosphate dehydrogenase (NAD+)	1 (0.28%)	0	0	0	1	0	0	0	0
15.3	metal handling.regulation	1 (0.28%)	0	1	0	0	0	0	0	0
16	secondary metabolism	1 (0.28%)	1	0	0	0	0	0	0	0
16.8	secondary metabolism.flavonoids	1 (0.28%)	1	0	0	0	0	0	0	0
16.8.2	secondary metabolism.flavonoids.chalcones	1 (0.28%)	1	0	0	0	0	0	0	0
17.4	hormone metabolism.cytokinin	1 (0.28%)	0	0	0	0	0	1	0	0
17.4.1	hormone metabolism.cytokinin.synthesis-degradation	1 (0.28%)	0	0	0	0	0	1	0	0
20.1	stress.biotic	1 (0.28%)	0	0	0	0	1	0	0	0
20.2	stress.abiotic	1 (0.28%)	0	0	0	0	1	0	0	0
20.2.1	stress.abiotic.heat	1 (0.28%)	0	0	0	0	1	0	0	0
26.24	misc.GCN5-related N-acetyltransferase	1 (0.28%)	0	0	0	0	0	1	0	0
26.3.4	misc.gluco-, galacto- and mannosidases.endoglucanase	1 (0.28%)	0	0	0	0	0	0	0	1
27.2	RNA.transcription	1 (0.28%)	1	0	0	0	0	0	0	0
27.3.26	RNA.regulation of transcription.MYB-related transcription factor family	1 (0.28%)	0	0	0	0	0	1	0	0
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	1 (0.28%)	1	0	0	0	0	0	0	0
27.3.4	RNA.regulation of transcription.ARF, Auxin Response Factor family	1 (0.28%)	0	0	0	0	0	1	0	0
27.3.40	RNA.regulation of transcription.Aux/IAA family	1 (0.28%)	0	0	0	0	1	0	0	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	1 (0.28%)	0	0	0	1	0	0	0	0
27.3.7	RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family	1 (0.28%)	0	0	0	0	1	0	0	0
27.3.8	RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family	1 (0.28%)	0	0	0	1	0	0	0	0
3.1	minor CHO metabolism.raffinose family	1 (0.28%)	0	0	1	0	0	0	0	0
28.1	DNA.synthesis/chromatin structure	1 (0.28%)	0	1	0	0	0	0	0	0
28.1.3	DNA.synthesis/chromatin structure.histone	1 (0.28%)	0	1	0	0	0	0	0	0
28.99	DNA.unspecified	1 (0.28%)	0	0	0	0	0	1	0	0
29.1.10	protein.aa activation.methionine-tRNA ligase	1 (0.28%)	0	0	0	0	0	0	0	1
29.1.6	protein.aa activation.lysine-tRNA ligase	1 (0.28%)	0	0	0	0	0	0	0	1
29.2	protein.synthesis	1 (0.28%)	1	0	0	0	0	0	0	0
29.2.1.1.2.2.2	protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L2	1 (0.28%)	0	0	0	0	0	0	1	0
29.2.1.2.1.6	protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S6	1 (0.28%)	0	0	0	0	1	0	0	0
29.2.2	protein.synthesis.ribosome biogenesis	1 (0.28%)	1	0	0	0	0	0	0	0
29.2.2.1	protein.synthesis.ribosome biogenesis.export from nucleus	1 (0.28%)	1	0	0	0	0	0	0	0
29.3.4.4	protein.targeting.secretory pathway.plasma membrane	1 (0.28%)	0	0	0	0	1	0	0	0
29.3.4.99	protein.targeting.secretory pathway.unspecified	1 (0.28%)	0	0	1	0	0	0	0	0
3.1.1	minor CHO metabolism.raffinose family.galactinol synthases	1 (0.28%)	0	0	1	0	0	0	0	0
3.1.1.2	minor CHO metabolism.raffinose family.galactinol synthases.putative	1 (0.28%)	0	0	1	0	0	0	0	0
30.1	signalling.in sugar and nutrient physiology	1 (0.28%)	0	1	0	0	0	0	0	0
30.2.17	signalling.receptor kinases.DUF 26	1 (0.28%)	0	0	0	0	1	0	0	0
30.2.20	signalling.receptor kinases.wheat LRK10 like	1 (0.28%)	0	0	0	1	0	0	0	0
30.5	signalling.G-proteins	1 (0.28%)	1	0	0	0	0	0	0	0
34.21	transport.calcium	1 (0.28%)	1	0	0	0	0	0	0	0