PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_193
Name: RAV1
Description: N/A

#Associated genes: 462
#Associated MapMan terms: 141

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	83 (17.97%)	5	1	4	29	19	12	6	7
27.3	RNA.regulation of transcription	54 (11.69%)	3	1	2	20	14	7	4	3
29	protein	46 (9.96%)	3	1	4	11	9	4	6	8
30	signalling	30 (6.49%)	3	0	1	7	8	1	6	4
31	cell	24 (5.19%)	0	2	2	4	5	4	4	3
29.4	protein.postranslational modification	21 (4.55%)	1	0	1	5	3	2	4	5
27.1	RNA.processing	19 (4.11%)	2	0	1	7	3	3	1	2
17	hormone metabolism	17 (3.68%)	0	0	0	9	2	3	2	1
30.5	signalling.G-proteins	14 (3.03%)	1	0	0	4	2	1	3	3
28	DNA	13 (2.81%)	0	1	2	2	1	3	2	2
28.1	DNA.synthesis/chromatin structure	13 (2.81%)	0	1	2	2	1	3	2	2
17.2	hormone metabolism.auxin	12 (2.60%)	0	0	0	7	1	1	2	1
29.3	protein.targeting	11 (2.38%)	1	1	2	3	2	1	0	1
31.1	cell.organisation	11 (2.38%)	0	0	2	3	1	2	2	1
29.4.1	protein.postranslational modification.kinase	10 (2.16%)	0	0	0	3	2	0	3	2
27.4	RNA.RNA binding	9 (1.95%)	0	0	1	1	2	2	1	2
29.5	protein.degradation	9 (1.95%)	0	0	1	2	3	1	0	2
31.2	cell.division	9 (1.95%)	0	0	0	0	3	2	2	2
20	stress	8 (1.73%)	0	0	1	4	0	2	0	1
27.1.1	RNA.processing.splicing	8 (1.73%)	1	0	0	4	1	1	0	1
27.3.99	RNA.regulation of transcription.unclassified	8 (1.73%)	1	0	0	4	1	2	0	0
29.3.1	protein.targeting.nucleus	8 (1.73%)	1	1	1	3	1	0	0	1
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	8 (1.73%)	0	0	0	3	1	0	2	2
34	transport	8 (1.73%)	0	0	2	1	1	2	1	1
11	lipid metabolism	7 (1.52%)	1	0	0	1	2	1	1	1
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	7 (1.52%)	0	0	0	6	0	0	1	0
30.2	signalling.receptor kinases	7 (1.52%)	0	0	0	3	3	0	1	0
33	development	7 (1.52%)	0	0	0	3	2	2	0	0
33.99	development.unspecified	7 (1.52%)	0	0	0	3	2	2	0	0
26	misc	6 (1.30%)	0	0	0	1	2	2	0	1
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	6 (1.30%)	0	0	1	1	2	1	1	0
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	6 (1.30%)	0	0	0	4	1	0	1	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	6 (1.30%)	0	0	1	3	1	0	1	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	6 (1.30%)	0	0	0	3	0	1	1	1
17.2.2	hormone metabolism.auxin.signal transduction	5 (1.08%)	0	0	0	1	1	1	1	1
27.1.2	RNA.processing.RNA helicase	5 (1.08%)	0	0	1	1	0	1	1	1
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	5 (1.08%)	1	0	0	0	3	0	0	1
29.5.11.4.1	protein.degradation.ubiquitin.E3.HECT	5 (1.08%)	0	0	0	1	2	1	0	1
30.3	signalling.calcium	5 (1.08%)	1	0	0	0	1	0	2	1
10	cell wall	4 (0.87%)	0	0	0	1	0	2	1	0
20.1	stress.biotic	4 (0.87%)	0	0	1	1	0	1	0	1
20.2	stress.abiotic	4 (0.87%)	0	0	0	3	0	1	0	0
29.5.7	protein.degradation.metalloprotease	4 (0.87%)	0	0	1	1	1	0	0	1
30.11	signalling.light	4 (0.87%)	1	0	1	0	2	0	0	0
11.9	lipid metabolism.lipid degradation	3 (0.65%)	1	0	0	0	0	0	1	1
11.9.3	lipid metabolism.lipid degradation.lysophospholipases	3 (0.65%)	1	0	0	0	0	0	1	1
16	secondary metabolism	3 (0.65%)	0	0	0	1	2	0	0	0
16.10	secondary metabolism.simple phenols	3 (0.65%)	0	0	0	1	2	0	0	0
17.3	hormone metabolism.brassinosteroid	3 (0.65%)	0	0	0	2	1	0	0	0
17.3.2	hormone metabolism.brassinosteroid.signal transduction	3 (0.65%)	0	0	0	2	1	0	0	0
17.3.2.2	hormone metabolism.brassinosteroid.signal transduction.BZR	3 (0.65%)	0	0	0	2	1	0	0	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	3 (0.65%)	0	0	0	0	2	0	0	1
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	3 (0.65%)	0	0	0	2	0	0	1	0
29.3.4	protein.targeting.secretory pathway	3 (0.65%)	0	0	1	0	1	1	0	0
29.5.11	protein.degradation.ubiquitin	3 (0.65%)	0	0	0	1	1	1	0	0
29.5.11.20	protein.degradation.ubiquitin.proteasom	3 (0.65%)	0	0	0	1	1	1	0	0
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	3 (0.65%)	0	0	1	0	0	1	0	1
30.2.11	signalling.receptor kinases.leucine rich repeat XI	3 (0.65%)	0	0	0	1	2	0	0	0
30.2.3	signalling.receptor kinases.leucine rich repeat III	3 (0.65%)	0	0	0	3	0	0	0	0
1	PS	2 (0.43%)	0	0	0	0	0	0	0	2
10.2	cell wall.cellulose synthesis	2 (0.43%)	0	0	0	0	0	2	0	0
10.2.2	cell wall.cellulose synthesis.COBRA	2 (0.43%)	0	0	0	0	0	2	0	0
11.1	lipid metabolism.FA synthesis and FA elongation	2 (0.43%)	0	0	0	0	2	0	0	0
11.3	lipid metabolism.Phospholipid synthesis	2 (0.43%)	0	0	0	1	0	1	0	0
13	amino acid metabolism	2 (0.43%)	1	0	0	0	0	0	0	1
13.1	amino acid metabolism.synthesis	2 (0.43%)	1	0	0	0	0	0	0	1
17.1	hormone metabolism.abscisic acid	2 (0.43%)	0	0	0	0	0	2	0	0
20.2.1	stress.abiotic.heat	2 (0.43%)	0	0	0	2	0	0	0	0
27.3.21	RNA.regulation of transcription.GRAS transcription factor family	2 (0.43%)	0	0	0	2	0	0	0	0
27.3.26	RNA.regulation of transcription.MYB-related transcription factor family	2 (0.43%)	0	0	0	0	2	0	0	0
27.3.29	RNA.regulation of transcription.TCP transcription factor family	2 (0.43%)	0	0	0	1	1	0	0	0
27.3.44	RNA.regulation of transcription.Chromatin Remodeling Factors	2 (0.43%)	0	0	0	0	1	1	0	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	2 (0.43%)	0	0	0	1	0	0	0	1
29.1	protein.aa activation	2 (0.43%)	0	0	0	1	1	0	0	0
29.1.21	protein.aa activation.histidine-tRNA ligase	2 (0.43%)	0	0	0	1	1	0	0	0
29.3.4.2	protein.targeting.secretory pathway.golgi	2 (0.43%)	0	0	0	0	1	1	0	0
29.6	protein.folding	2 (0.43%)	0	0	0	0	0	0	2	0
30.2.17	signalling.receptor kinases.DUF 26	2 (0.43%)	0	0	0	0	1	0	1	0
31.2.5	cell.division.plastid	2 (0.43%)	0	0	0	0	2	0	0	0
31.4	cell.vesicle transport	2 (0.43%)	0	1	0	1	0	0	0	0
34.7	transport.phosphate	2 (0.43%)	0	0	0	1	0	1	0	0
34.99	transport.misc	2 (0.43%)	0	0	0	0	0	0	1	1
1.1	PS.lightreaction	1 (0.22%)	0	0	0	0	0	0	0	1
1.1.40	PS.lightreaction.cyclic electron flow-chlororespiration	1 (0.22%)	0	0	0	0	0	0	0	1
1.2	PS.photorespiration	1 (0.22%)	0	0	0	0	0	0	0	1
1.2.6	PS.photorespiration.hydroxypyruvate reductase	1 (0.22%)	0	0	0	0	0	0	0	1
3	minor CHO metabolism	1 (0.22%)	0	1	0	0	0	0	0	0
10.1	cell wall.precursor synthesis	1 (0.22%)	0	0	0	0	0	0	1	0
10.1.9	cell wall.precursor synthesis.MUR4	1 (0.22%)	0	0	0	0	0	0	1	0
10.5	cell wall.cell wall proteins	1 (0.22%)	0	0	0	1	0	0	0	0
10.5.4	cell wall.cell wall proteins.HRGP	1 (0.22%)	0	0	0	1	0	0	0	0
11.1.12	lipid metabolism.FA synthesis and FA elongation.ACP protein	1 (0.22%)	0	0	0	0	1	0	0	0
11.1.8	lipid metabolism.FA synthesis and FA elongation.acyl coa ligase	1 (0.22%)	0	0	0	0	1	0	0	0
11.3.5	lipid metabolism.Phospholipid synthesis.diacylglycerol kinase	1 (0.22%)	0	0	0	1	0	0	0	0
11.3.6	lipid metabolism.Phospholipid synthesis.choline-phosphate cytidylyltransferase	1 (0.22%)	0	0	0	0	0	1	0	0
11.9.3.1	lipid metabolism.lipid degradation.lysophospholipases.phospholipase D	1 (0.22%)	0	0	0	0	0	0	0	1
11.9.3.2	lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase	1 (0.22%)	1	0	0	0	0	0	0	0
13.1.6	amino acid metabolism.synthesis.aromatic aa	1 (0.22%)	1	0	0	0	0	0	0	0
13.1.6.1	amino acid metabolism.synthesis.aromatic aa.chorismate	1 (0.22%)	1	0	0	0	0	0	0	0
13.1.6.1.5	amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate kinase	1 (0.22%)	1	0	0	0	0	0	0	0
13.1.7	amino acid metabolism.synthesis.histidine	1 (0.22%)	0	0	0	0	0	0	0	1
13.1.7.2	amino acid metabolism.synthesis.histidine.bifunctional phosphoribosyl-ATP diphosphatase and phosphoribosyl-AMP cyclohydrolase	1 (0.22%)	0	0	0	0	0	0	0	1
17.1.2	hormone metabolism.abscisic acid.signal transduction	1 (0.22%)	0	0	0	0	0	1	0	0
17.1.3	hormone metabolism.abscisic acid.induced-regulated-responsive-activated	1 (0.22%)	0	0	0	0	0	1	0	0
20.1.7	stress.biotic.PR-proteins	1 (0.22%)	0	0	0	0	0	0	0	1
20.2.2	stress.abiotic.cold	1 (0.22%)	0	0	0	1	0	0	0	0
26.10	misc.cytochrome P450	1 (0.22%)	0	0	0	0	0	0	0	1
26.2	misc.UDP glucosyl and glucoronyl transferases	1 (0.22%)	0	0	0	0	0	1	0	0
26.21	misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	1 (0.22%)	0	0	0	0	0	1	0	0
26.22	misc.short chain dehydrogenase/reductase (SDR)	1 (0.22%)	0	0	0	1	0	0	0	0
26.23	misc.rhodanese	1 (0.22%)	0	0	0	0	1	0	0	0
26.3	misc.gluco-, galacto- and mannosidases	1 (0.22%)	0	0	0	0	1	0	0	0
26.3.2	misc.gluco-, galacto- and mannosidases.beta-galactosidase	1 (0.22%)	0	0	0	0	1	0	0	0
27.1.19	RNA.processing.ribonucleases	1 (0.22%)	0	0	0	0	1	0	0	0
27.2	RNA.transcription	1 (0.22%)	0	0	0	1	0	0	0	0
27.3.14	RNA.regulation of transcription.CCAAT box binding factor family, HAP2	1 (0.22%)	0	0	0	0	0	1	0	0
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	1 (0.22%)	1	0	0	0	0	0	0	0
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	1 (0.22%)	0	0	0	0	0	1	0	0
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	1 (0.22%)	0	0	0	0	0	1	0	0
27.3.4	RNA.regulation of transcription.ARF, Auxin Response Factor family	1 (0.22%)	0	0	0	0	0	1	0	0
27.3.54	RNA.regulation of transcription.Histone acetyltransferases	1 (0.22%)	0	0	0	0	1	0	0	0
27.3.66	RNA.regulation of transcription.Psudo ARR transcription factor family	1 (0.22%)	0	0	0	1	0	0	0	0
27.3.7	RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family	1 (0.22%)	0	1	0	0	0	0	0	0
27.3.8	RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family	1 (0.22%)	0	0	0	1	0	0	0	0
28.1.3	DNA.synthesis/chromatin structure.histone	1 (0.22%)	0	0	0	1	0	0	0	0
28.1.3.2	DNA.synthesis/chromatin structure.histone.core	1 (0.22%)	0	0	0	1	0	0	0	0
28.1.3.2.3	DNA.synthesis/chromatin structure.histone.core.H3	1 (0.22%)	0	0	0	1	0	0	0	0
29.2	protein.synthesis	1 (0.22%)	1	0	0	0	0	0	0	0
29.2.1.2.2.34	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34	1 (0.22%)	0	0	0	1	0	0	0	0
29.2.2	protein.synthesis.ribosome biogenesis	1 (0.22%)	1	0	0	0	0	0	0	0
29.3.4.99	protein.targeting.secretory pathway.unspecified	1 (0.22%)	0	0	1	0	0	0	0	0
29.5.2	protein.degradation.autophagy	1 (0.22%)	0	0	0	0	1	0	0	0
3.6	minor CHO metabolism.callose	1 (0.22%)	0	1	0	0	0	0	0	0
30.2.24	signalling.receptor kinases.S-locus glycoprotein like	1 (0.22%)	0	0	0	0	1	0	0	0
31.3	cell.cycle	1 (0.22%)	0	1	0	0	0	0	0	0
31.5	cell.cell death	1 (0.22%)	0	0	0	0	1	0	0	0
31.5.1	cell.cell death.plants	1 (0.22%)	0	0	0	0	1	0	0	0
34.1	transport.p- and v-ATPases	1 (0.22%)	0	0	1	0	0	0	0	0
34.16	transport.ABC transporters and multidrug resistance systems	1 (0.22%)	0	0	0	0	0	1	0	0
34.3	transport.amino acids	1 (0.22%)	0	0	1	0	0	0	0	0
34.8	transport.metabolite transporters at the envelope membrane	1 (0.22%)	0	0	0	0	1	0	0	0