PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_161
Name: MYBC1;AT3G10760;LUX;AT5G05090;AT5G59570
Description: N/A

#Associated genes: 380
#Associated MapMan terms: 143

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	71 (18.68%)	2	9	4	28	11	4	7	6
27.3	RNA.regulation of transcription	45 (11.84%)	2	4	3	19	9	2	3	3
29	protein	36 (9.47%)	3	7	2	8	4	4	2	6
28	DNA	26 (6.84%)	3	1	2	6	5	0	8	1
28.1	DNA.synthesis/chromatin structure	24 (6.32%)	2	1	2	6	4	0	8	1
29.4	protein.postranslational modification	19 (5.00%)	1	4	1	5	2	2	0	4
31	cell	19 (5.00%)	1	2	1	6	2	2	3	2
27.1	RNA.processing	18 (4.74%)	0	3	0	6	1	2	3	3
27.1.2	RNA.processing.RNA helicase	16 (4.21%)	0	2	0	6	1	2	3	2
30	signalling	15 (3.95%)	0	0	1	4	2	3	2	3
17	hormone metabolism	12 (3.16%)	1	0	0	6	5	0	0	0
31.4	cell.vesicle transport	12 (3.16%)	1	1	1	3	2	1	2	1
27.3.99	RNA.regulation of transcription.unclassified	11 (2.89%)	0	1	0	6	2	0	1	1
33	development	10 (2.63%)	1	0	0	4	2	0	1	2
28.1.3	DNA.synthesis/chromatin structure.histone	9 (2.37%)	1	1	2	1	2	0	2	0
23	nucleotide metabolism	8 (2.11%)	0	2	1	1	1	1	0	2
26	misc	8 (2.11%)	1	3	2	1	1	0	0	0
29.5	protein.degradation	8 (2.11%)	1	1	0	2	0	1	1	2
30.5	signalling.G-proteins	8 (2.11%)	0	0	1	4	1	1	1	0
27.4	RNA.RNA binding	7 (1.84%)	0	2	1	3	1	0	0	0
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	7 (1.84%)	1	0	0	1	3	1	1	0
33.99	development.unspecified	7 (1.84%)	1	0	0	3	1	0	0	2
34	transport	7 (1.84%)	1	0	0	3	3	0	0	0
17.2	hormone metabolism.auxin	6 (1.58%)	1	0	0	4	1	0	0	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	6 (1.58%)	0	1	1	0	2	1	1	0
11	lipid metabolism	5 (1.32%)	0	1	1	1	0	1	1	0
20	stress	5 (1.32%)	2	0	0	1	1	1	0	0
23.4	nucleotide metabolism.phosphotransfer and pyrophosphatases	5 (1.32%)	0	1	1	0	1	1	0	1
23.4.1	nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase	5 (1.32%)	0	1	1	0	1	1	0	1
29.3	protein.targeting	5 (1.32%)	1	1	0	1	1	0	1	0
29.5.9	protein.degradation.AAA type	5 (1.32%)	0	0	0	2	0	0	1	2
31.1	cell.organisation	5 (1.32%)	0	1	0	2	0	1	1	0
10	cell wall	4 (1.05%)	1	0	1	0	1	1	0	0
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	4 (1.05%)	1	0	0	3	0	0	0	0
20.2	stress.abiotic	4 (1.05%)	2	0	0	1	0	1	0	0
20.2.3	stress.abiotic.drought/salt	4 (1.05%)	2	0	0	1	0	1	0	0
27.3.5	RNA.regulation of transcription.ARR	4 (1.05%)	0	0	0	2	2	0	0	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	4 (1.05%)	0	1	0	1	2	0	0	0
29.3.4	protein.targeting.secretory pathway	4 (1.05%)	1	1	0	1	1	0	0	0
30.4	signalling.phosphinositides	4 (1.05%)	0	0	0	0	1	1	0	2
2	major CHO metabolism	3 (0.79%)	1	0	0	1	0	0	1	0
2.2	major CHO metabolism.degradation	3 (0.79%)	1	0	0	1	0	0	1	0
3	minor CHO metabolism	3 (0.79%)	0	1	0	2	0	0	0	0
11.8	lipid metabolism.exotics(steroids, squalene etc)	3 (0.79%)	0	0	0	1	0	1	1	0
2.2.2	major CHO metabolism.degradation.starch	3 (0.79%)	1	0	0	1	0	0	1	0
2.2.2.1	major CHO metabolism.degradation.starch.starch cleavage	3 (0.79%)	1	0	0	1	0	0	1	0
2.2.2.1.2	major CHO metabolism.degradation.starch.starch cleavage.beta amylase	3 (0.79%)	1	0	0	1	0	0	1	0
26.2	misc.UDP glucosyl and glucoronyl transferases	3 (0.79%)	0	1	2	0	0	0	0	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	3 (0.79%)	1	1	0	0	0	0	1	0
27.3.4	RNA.regulation of transcription.ARF, Auxin Response Factor family	3 (0.79%)	0	0	0	2	0	0	0	1
29.2.1.2.2.34	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34	3 (0.79%)	0	1	0	0	1	0	0	1
29.5.11	protein.degradation.ubiquitin	3 (0.79%)	1	1	0	0	0	1	0	0
29.5.11.3	protein.degradation.ubiquitin.E2	3 (0.79%)	1	1	0	0	0	1	0	0
30.4.1	signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase	3 (0.79%)	0	0	0	0	1	1	0	1
34.99	transport.misc	3 (0.79%)	0	0	0	2	1	0	0	0
4	glycolysis	2 (0.53%)	0	1	0	0	0	0	1	0
10.5	cell wall.cell wall proteins	2 (0.53%)	1	0	0	0	1	0	0	0
10.5.1	cell wall.cell wall proteins.AGPs	2 (0.53%)	1	0	0	0	1	0	0	0
10.5.1.1	cell wall.cell wall proteins.AGPs.AGP	2 (0.53%)	1	0	0	0	1	0	0	0
11.10	lipid metabolism.glycolipid synthesis	2 (0.53%)	0	1	1	0	0	0	0	0
11.10.1	lipid metabolism.glycolipid synthesis.MGDG synthase	2 (0.53%)	0	1	1	0	0	0	0	0
11.8.3	lipid metabolism.exotics (steroids, squalene etc).UDP-glucose:sterol glucosyltransferase	2 (0.53%)	0	0	0	1	0	1	0	0
17.1.1.1.10	hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase	2 (0.53%)	0	0	0	2	0	0	0	0
17.2.2	hormone metabolism.auxin.signal transduction	2 (0.53%)	0	0	0	1	1	0	0	0
17.3	hormone metabolism.brassinosteroid	2 (0.53%)	0	0	0	0	2	0	0	0
17.3.2	hormone metabolism.brassinosteroid.signal transduction	2 (0.53%)	0	0	0	0	2	0	0	0
17.3.2.2	hormone metabolism.brassinosteroid.signal transduction.BZR	2 (0.53%)	0	0	0	0	2	0	0	0
17.4	hormone metabolism.cytokinin	2 (0.53%)	0	0	0	0	2	0	0	0
17.4.1	hormone metabolism.cytokinin.synthesis-degradation	2 (0.53%)	0	0	0	0	2	0	0	0
17.8	hormone metabolism.salicylic acid	2 (0.53%)	0	0	0	2	0	0	0	0
17.8.1	hormone metabolism.salicylic acid.synthesis-degradation	2 (0.53%)	0	0	0	2	0	0	0	0
23.2	nucleotide metabolism.degradation	2 (0.53%)	0	0	0	1	0	0	0	1
26.4	misc.beta 1,3 glucan hydrolases	2 (0.53%)	1	1	0	0	0	0	0	0
26.4.1	misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase	2 (0.53%)	1	1	0	0	0	0	0	0
27.3.23	RNA.regulation of transcription.HSF,Heat-shock transcription factor family	2 (0.53%)	0	0	0	2	0	0	0	0
27.3.29	RNA.regulation of transcription.TCP transcription factor family	2 (0.53%)	0	0	0	2	0	0	0	0
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	2 (0.53%)	0	0	0	2	0	0	0	0
28.1.1	DNA.synthesis/chromatin structure.retrotransposon/transposase	2 (0.53%)	0	0	0	0	1	0	1	0
28.1.1.4	DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase	2 (0.53%)	0	0	0	0	1	0	1	0
28.1.3.2	DNA.synthesis/chromatin structure.histone.core	2 (0.53%)	1	0	0	0	1	0	0	0
29.2.1.2.2.14	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L14	2 (0.53%)	0	0	0	0	1	1	0	0
29.3.4.2	protein.targeting.secretory pathway.golgi	2 (0.53%)	1	0	0	1	0	0	0	0
3.5	minor CHO metabolism.others	2 (0.53%)	0	1	0	1	0	0	0	0
29.7	protein.glycosylation	2 (0.53%)	0	0	0	0	1	1	0	0
30.2	signalling.receptor kinases	2 (0.53%)	0	0	0	0	0	1	1	0
33.30	development.multitarget	2 (0.53%)	0	0	0	1	0	0	1	0
33.30.1	development.multitarget.target of rapamycin	2 (0.53%)	0	0	0	1	0	0	1	0
4.1	glycolysis.cytosolic branch	2 (0.53%)	0	1	0	0	0	0	1	0
34.13	transport.peptides and oligopeptides	2 (0.53%)	1	0	0	1	0	0	0	0
4.1.8	glycolysis.cytosolic branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)	2 (0.53%)	0	1	0	0	0	0	1	0
9	mitochondrial electron transport / ATP synthesis	1 (0.26%)	0	0	0	1	0	0	0	0
10.1	cell wall.precursor synthesis	1 (0.26%)	0	0	0	0	0	1	0	0
10.1.4	cell wall.precursor synthesis.UGD	1 (0.26%)	0	0	0	0	0	1	0	0
10.6	cell wall.degradation	1 (0.26%)	0	0	1	0	0	0	0	0
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	1 (0.26%)	0	0	1	0	0	0	0	0
11.8.1	lipid metabolism.exotics (steroids, squalene etc).sphingolipids	1 (0.26%)	0	0	0	0	0	0	1	0
16	secondary metabolism	1 (0.26%)	0	0	0	1	0	0	0	0
16.10	secondary metabolism.simple phenols	1 (0.26%)	0	0	0	1	0	0	0	0
20.1	stress.biotic	1 (0.26%)	0	0	0	0	1	0	0	0
20.1.7	stress.biotic.PR-proteins	1 (0.26%)	0	0	0	0	1	0	0	0
22	polyamine metabolism	1 (0.26%)	0	0	0	0	0	0	0	1
22.1	polyamine metabolism.synthesis	1 (0.26%)	0	0	0	0	0	0	0	1
22.1.3	polyamine metabolism.synthesis.arginine decarboxylase	1 (0.26%)	0	0	0	0	0	0	0	1
23.5	nucleotide metabolism.deoxynucleotide metabolism	1 (0.26%)	0	1	0	0	0	0	0	0
23.5.3	nucleotide metabolism.deoxynucleotide metabolism.cytosine deaminase	1 (0.26%)	0	1	0	0	0	0	0	0
25	C1-metabolism	1 (0.26%)	0	0	0	0	1	0	0	0
25.7	C1-metabolism.GTP cyclohydrolase I	1 (0.26%)	0	0	0	0	1	0	0	0
26.10	misc.cytochrome P450	1 (0.26%)	0	0	0	0	1	0	0	0
26.13	misc.acid and other phosphatases	1 (0.26%)	0	0	0	1	0	0	0	0
26.8	misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases	1 (0.26%)	0	1	0	0	0	0	0	0
27.2	RNA.transcription	1 (0.26%)	0	0	0	0	0	0	1	0
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	1 (0.26%)	0	0	0	0	1	0	0	0
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	1 (0.26%)	1	0	0	0	0	0	0	0
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	1 (0.26%)	0	0	1	0	0	0	0	0
27.3.50	RNA.regulation of transcription.General Transcription	1 (0.26%)	0	0	0	0	0	1	0	0
27.3.52	RNA.regulation of transcription.Global transcription factor group	1 (0.26%)	0	0	0	1	0	0	0	0
27.3.63	RNA.regulation of transcription.PHD finger transcription factor	1 (0.26%)	0	0	0	1	0	0	0	0
27.3.71	RNA.regulation of transcription.SNF7	1 (0.26%)	0	0	1	0	0	0	0	0
28.1.3.2.1	DNA.synthesis/chromatin structure.histone.core.H2A	1 (0.26%)	1	0	0	0	0	0	0	0
28.1.3.2.3	DNA.synthesis/chromatin structure.histone.core.H3	1 (0.26%)	0	0	0	0	1	0	0	0
28.2	DNA.repair	1 (0.26%)	1	0	0	0	0	0	0	0
28.99	DNA.unspecified	1 (0.26%)	0	0	0	0	1	0	0	0
29.2.1.2.1.3	protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S3	1 (0.26%)	1	0	0	0	0	0	0	0
29.3.3	protein.targeting.chloroplast	1 (0.26%)	0	0	0	0	0	0	1	0
29.3.4.1	protein.targeting.secretory pathway.ER	1 (0.26%)	0	0	0	0	1	0	0	0
29.3.4.99	protein.targeting.secretory pathway.unspecified	1 (0.26%)	0	1	0	0	0	0	0	0
29.4.1	protein.postranslational modification.kinase	1 (0.26%)	0	1	0	0	0	0	0	0
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	1 (0.26%)	0	1	0	0	0	0	0	0
29.6	protein.folding	1 (0.26%)	0	1	0	0	0	0	0	0
29.7.4	protein.glycosylation.UDP-glucose glycoprotein glucosyltransferase	1 (0.26%)	0	0	0	0	0	1	0	0
3.6	minor CHO metabolism.callose	1 (0.26%)	0	0	0	1	0	0	0	0
29.8	protein.assembly and cofactor ligation	1 (0.26%)	0	0	1	0	0	0	0	0
30.2.17	signalling.receptor kinases.DUF 26	1 (0.26%)	0	0	0	0	0	0	1	0
30.2.99	signalling.receptor kinases.misc	1 (0.26%)	0	0	0	0	0	1	0	0
31.3.1	cell.cycle.peptidylprolyl isomerase	1 (0.26%)	0	0	0	0	0	0	0	1
9.1	mitochondrial electron transport / ATP synthesis.NADH-DH	1 (0.26%)	0	0	0	1	0	0	0	0
30.99	signalling.unspecified	1 (0.26%)	0	0	0	0	0	0	0	1
31.2	cell.division	1 (0.26%)	0	0	0	1	0	0	0	0
31.3	cell.cycle	1 (0.26%)	0	0	0	0	0	0	0	1
33.1	development.storage proteins	1 (0.26%)	0	0	0	0	1	0	0	0
34.1	transport.p- and v-ATPases	1 (0.26%)	0	0	0	0	1	0	0	0
34.2	transport.sugars	1 (0.26%)	0	0	0	0	1	0	0	0
9.1.2	mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear	1 (0.26%)	0	0	0	1	0	0	0	0