Matrix_284 | KAN2; KAN3; KAN; KAN4 | Not Available | | 80.00% |
Matrix_114 | EPR1; AT3G10113 | Not Available | | 74.55% |
Matrix_429 | KAN4 | Not Available | | 74.26% |
Matrix_351 | HAT9; ATHB-4; ATHB2; HAT22; HAT14 | Not Available | | 73.52% |
Matrix_97 | APRR2 | Not Available | | 71.47% |
Matrix_491 | AT1G68670; AT3G25790 | Not Available | | 71.46% |
Matrix_259 | AT1G50680; AT1G51120 | Not Available | | 70.98% |
Matrix_508 | APL; AT3G12730; AT3G24120; UNE16 | Not Available | | 70.33% |
Matrix_69 | AT2G03500 | Not Available | | 70.26% |
Matrix_231 | HDG2; HDG3; ATML1; HB-7 | Not Available | | 70.16% |
Matrix_143 | GATA14; GATA6; GATA5 | Not Available | | 69.88% |
Matrix_93 | YAB5 | Not Available | | 69.64% |
Matrix_328 | AT1G76580 | Not Available | | 69.52% |
Matrix_212 | ATHB-12 | Not Available | | 69.44% |
Matrix_333 | GATA3 | Not Available | | 68.89% |
Matrix_421 | GLK1 | Not Available | | 68.70% |
Matrix_336 | AT5G08520 | Not Available | | 68.69% |
Matrix_70 | GATA26 | Not Available | | 68.27% |
Matrix_444 | AT1G19485; AT4G17950 | Not Available | | 67.97% |
Matrix_162 | AtPHR1 | Not Available | | 67.89% |
Matrix_178 | HSFB2A | Not Available | | 67.74% |
Matrix_461 | ATHB12 | Not Available | | 67.52% |
Matrix_423 | AT3G04030 | Not Available | | 67.45% |
Matrix_431 | ATHB21; HB-3 | Not Available | | 67.26% |
Matrix_4 | ARR14 | Not Available | | 67.15% |
Matrix_210 | ARR1 | Not Available | | 67.15% |
Matrix_227 | AT1G64620 | Not Available | | 67.13% |
Matrix_142 | ZFP8 | Not Available | | 66.66% |
Matrix_88 | AHL12 | Not Available | | 66.52% |
Matrix_17 | WRKY22 | Not Available | | 66.48% |
Matrix_16 | AT3G04450; PHL1 | Not Available | | 66.28% |
Matrix_308 | INO | Not Available | | 66.16% |
Matrix_380 | ATMYR1 | Not Available | | 66.02% |
Matrix_361 | AT1G25550 | Not Available | | 65.63% |
Matrix_236 | CCA1 | Not Available | | 65.56% |
Matrix_38 | SPL14 | Not Available | | 65.56% |
Matrix_157 | LHY; RVE2 | Not Available | | 65.50% |
Matrix_87 | AT1G19000 | Not Available | | 65.34% |
Matrix_435 | ATHB51 | Not Available | | 65.26% |
Matrix_182 | ATHB6 | Not Available | | 65.25% |
Matrix_125 | AHL12 | Not Available | | 64.94% |
Matrix_120 | BEE2 | Not Available | | 64.73% |
Matrix_21 | HSFC1 | Not Available | | 64.69% |
Matrix_59 | AT4G00238; AT4G00250 | Not Available | | 64.48% |
Matrix_416 | ASL5 | Not Available | | 64.05% |
Matrix_131 | HDG12; EDT1; GL2; HDG8 | Not Available | | 63.96% |
Matrix_465 | MYC4 | Not Available | | 63.93% |
Matrix_12 | EIN3; EIL2 | Not Available | | 63.76% |
Matrix_75 | WRKY29 | Not Available | | 63.74% |
Matrix_141 | AT3G25990 | Not Available | | 63.73% |
Matrix_206 | CUC1; ANAC100 | Not Available | | 63.63% |
Matrix_37 | GATA27 | Not Available | | 63.59% |
Matrix_324 | AT2G01060 | Not Available | | 63.54% |
Matrix_341 | HMGA | Not Available | | 63.39% |
Matrix_389 | ILR3 | Not Available | | 63.24% |
Matrix_283 | GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC | Not Available | | 63.23% |
Matrix_330 | MYC2; TT8 | Not Available | | 63.22% |
Matrix_302 | HAT1; HAT2 | Not Available | | 63.21% |
Matrix_322 | NST3; ANAC015; BRN2 | Not Available | | 63.15% |
Matrix_71 | ATHB7 | Not Available | | 62.94% |
Matrix_9 | AT5G04760 | Not Available | | 62.88% |
Matrix_81 | YAB1 | Not Available | | 62.74% |
Matrix_99 | DOF4.7 | Not Available | | 62.66% |
Matrix_268 | EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105 | Not Available | | 62.48% |
Matrix_152 | EIL1; AT5G65100 | Not Available | | 62.47% |
Matrix_471 | KAN4 | Not Available | | 62.34% |
Matrix_151 | ASIL1 | Not Available | | 62.30% |
Matrix_101 | ERF5 | Not Available | | 62.16% |
Matrix_72 | CDF2 | Not Available | | 61.94% |
Matrix_276 | AT1G01520; AT3G09600; AT4G01280; LCL1; AT5G52660 | Not Available | | 61.88% |
Matrix_32 | AHL25 | Not Available | | 61.75% |
Matrix_286 | GATA7 | Not Available | | 61.52% |
Matrix_168 | AHL25 | Not Available | | 61.46% |
Matrix_160 | RVE1 | Not Available | | 61.46% |
Matrix_374 | AT5G07580; AT5G61590 | Not Available | | 61.43% |
Matrix_287 | ERF2 | Not Available | | 61.35% |
Matrix_46 | AT4G21895 | Not Available | | 61.33% |
Matrix_279 | HRS1 | Not Available | | 61.28% |
Matrix_63 | ARR10 | Not Available | | 61.03% |
Matrix_103 | ATHB1 | The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities | | 61.02% |
Matrix_249 | WRKY11 | Not Available | | 60.96% |
Matrix_354 | AHL12 | Not Available | | 60.86% |
Motif_131 | P1BS | PHR1-binding sequence found in the upstream regions of phosphate starvation responsive genes from several plant species; phr1 (phosphate starvation response 1) gene codes for PHR1 protein related to PSR1 gene in C. reinhardtii | | 60.85% |
Matrix_204 | WOX13 | Not Available | | 60.63% |
Matrix_280 | TCP24; TCP1; BRC2; ATTCP18 | Not Available | | 60.48% |
Matrix_158 | AT1G03040; LRL1; UNE12; LRL2; LRL3 | Not Available | | 60.41% |
Matrix_384 | ATWRKY17 | Not Available | | 60.39% |
Matrix_271 | AT3G16350 | Not Available | | 60.27% |
Matrix_323 | BIM3 | Not Available | | 60.26% |
Matrix_14 | ZCW32; AT5G62610 | Not Available | | 60.09% |
Matrix_505 | GATA8 | Not Available | | 59.98% |
Matrix_313 | ATMYB65; MYB33 | Not Available | | 59.97% |
Matrix_226 | GATA1 | Not Available | | 59.93% |
Matrix_129 | ABF1 | Not Available | | 59.87% |
Matrix_248 | ZFP5 | Not Available | | 59.83% |
Matrix_449 | BIM2 | Not Available | | 59.80% |
Matrix_263 | WRKY33; WRKY19; WRKY32 | Not Available | | 59.79% |
Matrix_112 | TBP2; TFIID-1 | Not Available | | 59.67% |
Matrix_489 | RAV1 | Not Available | | 59.66% |
Matrix_447 | RVE1 | Not Available | | 59.62% |
Matrix_53 | MYC3 | Not Available | | 59.62% |
Matrix_181 | Dof5.7 | Not Available | | 59.61% |
Matrix_3 | WRKY48 | Not Available | | 59.60% |
Matrix_501 | DAG2 | Not Available | | 59.55% |
Matrix_78 | AT3G45610 | Not Available | | 59.46% |
Matrix_161 | MYBC1; AT3G10760; LUX; AT5G05090; AT5G59570 | Not Available | | 59.14% |
Matrix_383 | CCA1 | Not Available | | 59.10% |
Matrix_500 | WRKY43 | Not Available | | 58.88% |
Matrix_495 | HD-GL2-1; ANL2 | Not Available | | 58.85% |
Matrix_370 | WRKY50; WRKY51 | Not Available | | 58.82% |
Matrix_463 | HAT3.1 | Not Available | | 58.75% |
Matrix_177 | ADOF2 | Not Available | | 58.72% |
Matrix_502 | AT3G13040 | Not Available | | 58.72% |
Motif_235 | C8GCARGAT | Binding site of plant MADS-domain protein AGL15; CArG motif with a longer A/T-rich core;A variant of CArG motif, with a longer A/T-rich core; Binding site for AGL15 (AGAMOUS-like 15) | | 58.53% |
Matrix_201 | AT1G74840 | Not Available | | 58.50% |
Matrix_102 | WRKY21 | Not Available | | 58.37% |
Matrix_472 | ZN_C2_H2 | Not Available | | 58.16% |
Matrix_171 | LBD3; LBD4 | Not Available | | 58.13% |
Matrix_415 | WRKY27 | Not Available | | 58.01% |
Matrix_174 | ZAT2 | Not Available | | 57.77% |
Matrix_258 | WOX13 | Not Available | | 57.64% |
Matrix_296 | GBF2 | Not Available | | 57.55% |
Matrix_100 | AT1G48610 | Not Available | | 57.50% |
Matrix_200 | PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815 | Not Available | | 57.47% |
Matrix_317 | AT1G06070; AT2G31370; AT2G40620 | Not Available | | 57.39% |
Matrix_441 | ATHB5 | Not Available | | 57.39% |
Matrix_185 | AHL25 | Not Available | | 57.39% |
Matrix_41 | anac058 | Not Available | | 57.33% |
Matrix_316 | WRKY15; WRKY39; WRKY7; WRKY74 | Not Available | | 57.28% |
Matrix_350 | ARR14 | Not Available | | 57.10% |
Motif_115 | HSEs binding site motif | Arabidopsis and the heat stress transcription factor world: how many heat stress transcription factors do we need? | | 56.99% |
Matrix_195 | GATA2; GATA4 | Not Available | | 56.89% |
Matrix_6 | AT1G70000 | Not Available | | 56.88% |
Matrix_44 | CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2 | Not Available | | 56.82% |
Matrix_167 | ZAT6 | Not Available | | 56.78% |
Matrix_300 | bZIP68; bZIP16 | Not Available | | 56.77% |
Matrix_314 | WRKY65; WRKY14; WRKY35; WRKY69; WRKY16; ATWRKY52 | Not Available | | 56.77% |
Matrix_230 | ARR11 | Not Available | | 56.77% |
Matrix_202 | WRKY71; WRKY28; WRKY8 | Not Available | | 56.76% |
Matrix_408 | GATA12 | Not Available | | 56.75% |
Matrix_418 | KNAT6; KNAT2 | Not Available | | 56.69% |
Matrix_241 | HB-1; AT5G44180 | Not Available | | 56.60% |
Matrix_382 | AT3G04850 | Not Available | | 56.55% |
Matrix_512 | HAT3 | Not Available | | 56.55% |
Matrix_106 | AT5G47390 | Not Available | | 56.55% |
Matrix_207 | WRKY10; WRKY57; AT2G44745; ATWRKY13; WRKY49 | Not Available | | 56.51% |
Matrix_411 | DOF5.6 | Not Available | | 56.44% |
Matrix_391 | AHL20 | Not Available | | 56.38% |
Matrix_115 | AGL15 | Not Available | | 56.29% |
Matrix_54 | AHL20 | Not Available | | 56.28% |
Matrix_434 | ARR11 | Not Available | | 56.25% |
Motif_408 | EVENINGAT | Evening element found 46 times in the promoters of 31 cycling genes in Arabidopsis thaliana; Required for circadian control of gene expression; EE (evening element) motif; Also found in the promoter of the Solanum melongena gene encoding cysteine protease, and identified as cis-element for its circadian regulation;Orchestrated transcription of key pathways in Arabidopsis by the circadian clock | | 56.10% |
Matrix_483 | ICU4 | Not Available | | 55.94% |
Matrix_362 | DEAR3 | Not Available | | 55.88% |
Matrix_85 | SPL5 | Not Available | | 55.87% |
Matrix_425 | TIFY2A | Not Available | | 55.86% |
Matrix_452 | MYB46 | Not Available | | 55.84% |
Matrix_255 | cdf3 | Not Available | | 55.78% |
Matrix_109 | GBF3 | Not Available | | 55.68% |
Matrix_35 | YAB5; YAB3 | Not Available | | 55.33% |
Matrix_96 | TMO6 | Not Available | | 55.26% |
Matrix_122 | ABF1; AREB2 | Not Available | | 55.18% |
Matrix_392 | ARR2 | Not Available | | 55.09% |
Matrix_393 | REM1 | Not Available | | 55.05% |
Matrix_521 | AHL20 | Not Available | | 54.93% |
Matrix_256 | IXR11; KNAT5; KNAT4; KNAT3 | Not Available | | 54.77% |
Matrix_327 | ARR11 | Not Available | | 54.76% |
Matrix_274 | EDF3 | Not Available | | 54.75% |
Matrix_62 | HAT5 | Not Available | | 54.75% |
Matrix_197 | NAP | Not Available | | 54.68% |
Matrix_273 | ANAC55 | Not Available | | 54.68% |
Matrix_420 | ANAC58 | Not Available | | 54.67% |
Matrix_175 | Dof5.7 | Not Available | | 54.27% |
Matrix_326 | AT5G07310; Rap2.6L; AT5G61890 | Not Available | | 54.19% |
Matrix_67 | GLK1 | Not Available | | 54.06% |
Matrix_26 | ATMYB3; MYB24 | Not Available | | 54.01% |
Matrix_239 | AT5G04390 | Not Available | | 53.98% |
Motif_277 | ATHB1 binding site motif | Recognition sequence of Arabidopsis Athb-1 protein; Athb-1 protein has a HD-Zip motif (homeodomain (HD) with a closely linked leucine zipper motif (Zip)); HD-Zip domain binds to DNA as a dimer; The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities | | 53.98% |
Motif_352 | ATHB5 binding site motif | Consensus binding sequence for Arabidopsis class I HDzip (Homeodomein-leucine zipper) protein, ATHB5; ATHB5 protein forms dimers in solution; ATHB5 and ATHB6 exhibit identical DNA binding specificities; ATHB5 forms heterodimers with other class I HDzip proteins; DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro | | 53.97% |
Matrix_198 | STZ; C2H2; AZF3 | Not Available | | 53.92% |
Matrix_80 | BIM1 | Not Available | | 53.92% |
Matrix_126 | RBE | Not Available | | 53.84% |
Matrix_188 | SPL4 | Not Available | | 53.73% |
Matrix_261 | ATERF-1 | Not Available | | 53.58% |
Matrix_355 | ERF10; ERF11 | Not Available | | 53.41% |
Matrix_282 | bZIP60 | Not Available | | 53.31% |
Matrix_225 | MYB52 | Not Available | | 53.28% |
Matrix_520 | ARR14 | Not Available | | 53.23% |
Matrix_442 | AT5G62260 | Not Available | | 53.13% |
Matrix_329 | WRKY12 | Not Available | | 53.00% |
Matrix_164 | AT1G02030; AT2G45120; AZF2; AT3G60580 | Not Available | | 52.77% |
Matrix_379 | RHL41 | Not Available | | 52.70% |
Matrix_503 | AT2G37430; AT3G53600 | Not Available | | 52.68% |
Matrix_254 | MYB52 | Not Available | | 52.60% |
Matrix_199 | AT1G69170; SPL9; SPL15; SPL13A; SPL13B | Not Available | | 52.56% |
Motif_198 | CARGATCONSENSUS | CArG consensus sequence found in the promoter of Arabidopsis SOC1 which is the MADS-box flowering-time gene; FLC is a component of the vernalization (low-temperature) pathway binds directly to this site and blocks transcriptional activation of SOC1 by CONSTANS (CO) | | 52.52% |
Matrix_243 | RAP2.12; RAP2.2 | Not Available | | 52.49% |
Motif_231 | EIN3 | Ethylene signaling in Arabidopsis involves feedback regulation via the elaborate control of EBF2 expression by EIN3 | | 52.43% |
Matrix_436 | AT3G49930; AZF1 | Not Available | | 52.37% |
Matrix_515 | ddf2; ATCBF3; CBF1; CBF4 | Not Available | | 52.33% |
Matrix_23 | ANAC46 | Not Available | | 52.29% |
Matrix_190 | ATERF1 | Not Available | | 52.25% |
Matrix_332 | SPT; ALC | Not Available | | 52.23% |
Matrix_456 | bZIP60 | Not Available | | 52.12% |
Matrix_404 | OBP4 | Not Available | | 52.12% |
Matrix_321 | HRD | Not Available | | 51.77% |
Matrix_84 | AtGRF6 | Not Available | | 51.75% |
Matrix_293 | WRKY38 | Not Available | | 51.67% |
Matrix_89 | SOC1 | Genome-wide identification of SOC1 and SVP targets during the floral transition in Arabidopsis | | 51.67% |
Motif_43 | CCA1 binding site motif | CCA1 binding site; CCA1 protein (myb-related transcription factor) interact with two imperfect repeats of AAMAATCT in Lhcb1*3 gene of Arabidopsis thaliana; Related to regulation by phytochrome;A myb-related transcription factor is involved in the phytochrome regulation of an Arabidopsis Lhcb gene | | 51.57% |
Matrix_237 | MYB55 | Not Available | | 51.54% |
Matrix_58 | WRKY55; ATWRKY54; WRKY46; WRKY70; AtWRKY41; WRKY53; WRKY30 | Not Available | | 51.52% |
Matrix_494 | OBP4 | Not Available | | 51.50% |
Matrix_401 | MYB55 | Not Available | | 51.48% |
Matrix_331 | GBF1 | Not Available | | 51.42% |
Matrix_91 | CRF3 | Not Available | | 51.38% |
Matrix_56 | BZIP17; BZIP28; BZIP49 | Not Available | | 51.33% |
Matrix_213 | ATHB22 | Not Available | | 51.29% |
Matrix_413 | RAV1 | Not Available | | 51.25% |
Matrix_298 | RAV1 | Not Available | | 51.25% |
Motif_579 | WRECSAA01 | Wound-responsive element (WRE) found in the promoter region of cucumber ascorbate oxidase gene, CsAAO1; Binding site of proteins in tobacco nuclear extracts | | 51.20% |
Motif_169 | ATHB2 binding site motif | Recognition sequence of Arabidopsis Athb-2 protein; Athb-2 protein has a HD-Zip motif (homeodomain (HD) with a closely linked leucine zipper motif (Zip)); The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities | | 51.19% |
Matrix_318 | ATHB16 | Not Available | | 51.13% |
Matrix_493 | AT1G22985; AT1G71130 | Not Available | | 51.11% |
Matrix_116 | ANAC55 | Not Available | | 51.00% |
Matrix_427 | ZAT14 | Not Available | | 50.94% |
Matrix_366 | ARR14 | Not Available | | 50.78% |
Matrix_246 | ARR10 | Molecular structure of the GARP family of plant Myb-related DNA binding motifs of the Arabidopsis response regulators | | 50.76% |
Matrix_457 | TGA2 | Not Available | | 50.67% |
Matrix_307 | RGL2; RGL3 | Not Available | | 50.63% |
Motif_503 | EECCRCAH1 | EEC; Consensus motif of the two enhancer elements, EE-1 and EE-2, both found in the promoter region of the Chlamydomonas Cah1 (encoding a periplasmic carbonic anhydrase); Binding site of Myb transcription factor LCR1 | | 50.63% |
Motif_624 | ATHB6 binding site motif | Consensus binding sequence for Arabidopsis homeodomain-leucine zipper protein, ATHB6; ATHB6 is a target of the protein phosphatase ABI1 and regulates hormone responses; Homeodomain protein ATHB6 is a target of the protein phosphatase ABI1 and regulates hormone responses in Arabidopsis | | 50.55% |
Matrix_343 | AT2G33710 | Not Available | | 50.51% |
Matrix_347 | WOX14; WOX10 | Not Available | | 50.44% |
Matrix_518 | AT2G21230 | Not Available | | 50.25% |
Matrix_511 | AT1G05805; AT1G35460; AT1G51140; AT2G42280; AT2G43140; AT4G09180 | Not Available | | 50.23% |
Matrix_453 | EIL3 | Not Available | | 50.22% |
Motif_298 | GMHDLGMVSPB | Binding site of the soybean homeodomein leucine zipper proteins (GmHdl56, GmHdl57); Found in the phosphate response domain of the soybean VspB promoter; Located between -536 and -527; VspB encodes vacuolar glycoprotein acid phosphatase that serve as vegetative storage protein | | 50.17% |
Matrix_203 | GATA9; GATA12 | Not Available | | 50.17% |
Matrix_260 | CAMTA3 | Not Available | | 50.13% |
Motif_87 | AGL22; AGL20; AGL24 | Regulation of floral patterning by flowering time genes | | 50.06% |