Matrix_497 | AP3 | Not Available | | 87.16% |
Matrix_184 | AGL15 | Not Available | | 77.91% |
Matrix_407 | AP1 | Not Available | | 77.83% |
Matrix_36 | RAV1_1 | RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants | | 68.94% |
Matrix_208 | AP1 | Not Available | | 68.05% |
Matrix_412 | GL1 | Not Available | | 65.75% |
Matrix_258 | WOX13 | Not Available | | 63.29% |
Matrix_72 | CDF2 | Not Available | | 61.65% |
Matrix_181 | Dof5.7 | Not Available | | 60.50% |
Matrix_89 | SOC1 | Genome-wide identification of SOC1 and SVP targets during the floral transition in Arabidopsis | | 60.39% |
Matrix_357 | WRKY61; WRKY6; WRKY9; WRKY36; WRKY47; WRKY42; WRKY31; WRKY72 | Not Available | | 60.29% |
Matrix_227 | AT1G64620 | Not Available | | 60.11% |
Matrix_439 | AP3 | Not Available | | 59.83% |
Matrix_25 | AP3 | Not Available | | 59.78% |
Motif_660 | GT-3b | Pathogen- and NaCl-induced expression of the SCaM-4 promoter is mediated in part by a GT-1 box that interacts with a GT-1-like transcription factor | | 58.91% |
Matrix_136 | SEP3 | Not Available | | 58.50% |
Matrix_132 | SOC1 | Not Available | | 58.20% |
Matrix_61 | ATCBF3 | Not Available | | 57.19% |
Matrix_92 | AT1G33760 | Not Available | | 56.92% |
Matrix_210 | ARR1 | Not Available | | 56.56% |
Matrix_97 | APRR2 | Not Available | | 56.53% |
Matrix_454 | AT1G77200; ATERF38; AT4G16750; AT5G52020 | Not Available | | 56.20% |
Matrix_176 | MYB98 | Not Available | | 56.17% |
Matrix_4 | ARR14 | Not Available | | 56.01% |
Matrix_383 | CCA1 | Not Available | | 55.96% |
Matrix_213 | ATHB22 | Not Available | | 55.70% |
Motif_143 | VND6 | Arabidopsis VASCULAR-RELATED NAC-DOMAIN6 directly regulates the genes that govern programmed cell death and secondary wall formation during xylem differentiation | | 55.57% |
Matrix_341 | HMGA | Not Available | | 55.49% |
Matrix_153 | AP2 | Not Available | | 55.48% |
Matrix_160 | RVE1 | Not Available | | 55.42% |
Matrix_491 | AT1G68670; AT3G25790 | Not Available | | 55.40% |
Matrix_393 | REM1 | Not Available | | 55.30% |
Matrix_508 | APL; AT3G12730; AT3G24120; UNE16 | Not Available | | 55.27% |
Matrix_501 | DAG2 | Not Available | | 55.17% |
Motif_257 | BOX1PSGS2 | Box 1 element in pea glutamine synthetase (GS2) gene; An element in a 33-bp AT-rich sequence (box 1) of the 5' end of a GS2 promoter; Located at -837 to -827 of pea GS2; Multimer of box 1 element was used to isolate a cDNA encoding an AT-rich DNA binding protein (ATBP-1) | | 54.96% |
Motif_540 | CCA1 motif1 BS in CAB1 | A myb-related transcription factor is involved in the phytochrome regulation of an Arabidopsis Lhcb gene | | 54.87% |
Matrix_308 | INO | Not Available | | 54.85% |
Matrix_317 | AT1G06070; AT2G31370; AT2G40620 | Not Available | | 54.68% |
Matrix_255 | cdf3 | Not Available | | 54.62% |
Matrix_352 | LEC2 | Not Available | | 54.51% |
Motif_333 | GLUTEBP1OS | Glutelin BP-1; Binding site in the promoter region of glutelin Gt3 gene family of nuclear factor (PB-1); PB-1 is observed only in nuclear extract of developing seeds | | 54.51% |
Matrix_99 | DOF4.7 | Not Available | | 54.49% |
Motif_188 | CDA1ATCAB2 | CDA-1 (CAB2 DET1-associated factor 1) binding site in DtRE (dark response element) f of chlorophyll a/b-binding protein2 (CAB2) gene in Arabidopsis | | 54.49% |
Matrix_204 | WOX13 | Not Available | | 54.43% |
Matrix_324 | AT2G01060 | Not Available | | 54.29% |
Motif_420 | SORLREP2AT | one of Sequences Over-Represented in Light-Repressed Promoters (SORLREPs) in Arabidopsis; Computationally identified phyA-repressed motifs; See also all SORLREPs and all SORLIPs; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data | | 54.28% |
Motif_153 | MARABOX1 | A-box found in SAR(scaffold attachment region; or matrix attachment region, MAR) | | 54.04% |
Matrix_440 | LFY | Not Available | | 53.75% |
Matrix_361 | AT1G25550 | Not Available | | 53.66% |
Matrix_394 | DREB_U | Not Available | | 53.39% |
Matrix_69 | AT2G03500 | Not Available | | 53.38% |
Matrix_284 | KAN2; KAN3; KAN; KAN4 | Not Available | | 53.35% |
Matrix_262 | ATGRP2B; CSDP2 | Not Available | | 53.33% |
Matrix_237 | MYB55 | Not Available | | 53.32% |
Matrix_157 | LHY; RVE2 | Not Available | | 53.30% |
Matrix_249 | WRKY11 | Not Available | | 53.26% |
Matrix_26 | ATMYB3; MYB24 | Not Available | | 53.25% |
Matrix_404 | OBP4 | Not Available | | 53.24% |
Matrix_399 | TGA1 | Not Available | | 53.19% |
Matrix_114 | EPR1; AT3G10113 | Not Available | | 53.16% |
Matrix_109 | GBF3 | Not Available | | 53.10% |
Matrix_411 | DOF5.6 | Not Available | | 53.10% |
Matrix_104 | PI | Not Available | | 53.07% |
Matrix_382 | AT3G04850 | Not Available | | 53.04% |
Matrix_108 | PIF4 | Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | | 52.86% |
Matrix_452 | MYB46 | Not Available | | 52.86% |
Matrix_16 | AT3G04450; PHL1 | Not Available | | 52.83% |
Matrix_141 | AT3G25990 | Not Available | | 52.80% |
Matrix_280 | TCP24; TCP1; BRC2; ATTCP18 | Not Available | | 52.62% |
Matrix_286 | GATA7 | Not Available | | 52.62% |
Matrix_175 | Dof5.7 | Not Available | | 52.58% |
Matrix_54 | AHL20 | Not Available | | 52.58% |
Motif_423 | MYB2 | Evidence for a role for AtMYB2 in the induction of the Arabidopsis alcohol dehydrogenase gene (ADH1) by low oxygen | | 52.57% |
Matrix_244 | DREB2C | Not Available | | 52.55% |
Matrix_80 | BIM1 | Not Available | | 52.54% |
Matrix_385 | DEAR4 | Not Available | | 52.51% |
Motif_11 | L4DCPAL1 | L4 element, found in PAL1 promoter in carrot (Daucus carota), is a UV-B responsive element; L4 contains Box L-like sequence (TCCAACCA) | | 52.50% |
Matrix_168 | AHL25 | Not Available | | 52.46% |
Matrix_212 | ATHB-12 | Not Available | | 52.34% |
Matrix_340 | HSFC1 | Not Available | | 52.34% |
Matrix_58 | WRKY55; ATWRKY54; WRKY46; WRKY70; AtWRKY41; WRKY53; WRKY30 | Not Available | | 52.31% |
Matrix_17 | WRKY22 | Not Available | | 52.30% |
Matrix_265 | NGA3 | Not Available | | 52.25% |
Matrix_193 | RAV1 | Not Available | | 52.25% |
Matrix_12 | EIN3; EIL2 | Not Available | | 52.16% |
Matrix_311 | TGA1 | Not Available | | 52.15% |
Matrix_46 | AT4G21895 | Not Available | | 52.13% |
Matrix_430 | TOE2 | Not Available | | 51.98% |
Matrix_207 | WRKY10; WRKY57; AT2G44745; ATWRKY13; WRKY49 | Not Available | | 51.95% |
Matrix_354 | AHL12 | Not Available | | 51.94% |
Matrix_231 | HDG2; HDG3; ATML1; HB-7 | Not Available | | 51.92% |
Matrix_162 | AtPHR1 | Not Available | | 51.87% |
Matrix_66 | AtLEC2 | Genes directly regulated by LEAFY COTYLEDON2 provide insight into the control of embryo maturation and somatic embryogenesis | | 51.81% |
Matrix_420 | ANAC58 | Not Available | | 51.80% |
Matrix_201 | AT1G74840 | Not Available | | 51.74% |
Matrix_22 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 51.62% |
Matrix_500 | WRKY43 | Not Available | | 51.61% |
Matrix_259 | AT1G50680; AT1G51120 | Not Available | | 51.60% |
Matrix_142 | ZFP8 | Not Available | | 51.58% |
Motif_90 | GT1MOTIFPSRBCS | GT-1 motif; Consensus sequence of rbcS BOX II, III, II', III'; GT-1 box; 5' upstream region (-151) of pea (P.s.) rbcS gene; binding with trans factor GT-1; See GT1CORE | | 51.54% |
Motif_184 | PROXBBNNAPA | prox B (proximal portion of B-box) found in napA gene of Brassica napus; CA-rich sequence; Found between -130 and -124; Required for seed specific expression and ABA responsiveness; dist B ABRE mediated transactivation by ABI3 adn ABI3-dependent response to ABA; a tetramer of the composite RY/G complex mediated only ABA-independent transactivation by ABI3; B2 domain of ABI3 is necessary for ABA-independent and ABA-dependent activation through the dist B ABRE | | 51.49% |
Matrix_143 | GATA14; GATA6; GATA5 | Not Available | | 51.43% |
Matrix_148 | WRKY60 | Not Available | | 51.37% |
Matrix_410 | TOE2 | Not Available | | 51.37% |
Matrix_444 | AT1G19485; AT4G17950 | Not Available | | 51.23% |
Matrix_384 | ATWRKY17 | Not Available | | 51.19% |
Matrix_226 | GATA1 | Not Available | | 51.17% |
Matrix_125 | AHL12 | Not Available | | 51.14% |
Matrix_336 | AT5G08520 | Not Available | | 51.12% |
Motif_373 | TATABOX1 | TATA box; TATA box found in the 5'upstream region of rice alpha-amylase; TATA box found in beta-phaseolin promoter; sequence and spacing of TATA box elements are critical for accurate initiation | | 51.11% |
Matrix_185 | AHL25 | Not Available | | 51.11% |
Matrix_312 | ARF11; MP; ARF6; IAA21; ARF8; ARF4 | Not Available | | 51.07% |
Motif_404 | AACACOREOSGLUB1 | Core of AACA motifs found in rice glutelin genes, involved in controlling the endosperm-specific expression; AACA is also closely associated with the GCN4 motif in all rice glutelin genes and together have been shown to confer endosperm-specific enhancement to the truncated -90 CaMV 35S promoter | | 51.04% |
Matrix_421 | GLK1 | Not Available | | 51.04% |
Motif_461 | MYB80 | The MYB80 transcription factor is required for pollen development and the regulation of tapetal programmed cell death in Arabidopsis thaliana | | 51.02% |
Matrix_177 | ADOF2 | Not Available | | 50.98% |
Matrix_327 | ARR11 | Not Available | | 50.93% |
Motif_58 | LREBOXIPCCHS1 | BoxI; Light responsive element (LRE) found in the parsley CHS-1 (chalcone synthase-1) gene promoter; Required for light responsiveness; nuclear protein binding site; MRECHS (MRE=Myb Recognition Element)Recognition site of MYB305 and a novel factor PcMYB1 (Myb1 from P. crispum); PcMYB1 contains only one MYB repeat | | 50.87% |
Matrix_87 | AT1G19000 | Not Available | | 50.82% |
Matrix_268 | EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105 | Not Available | | 50.81% |
Matrix_154 | AT1G22190; AT1G36060; AT1G64380; RAP2.4; AT2G20880; AT2G22200; AT4G13620; AT4G28140; AT4G39780; AT5G65130 | Not Available | | 50.78% |
Matrix_447 | RVE1 | Not Available | | 50.75% |
Matrix_32 | AHL25 | Not Available | | 50.69% |
Matrix_479 | TOE1 | Not Available | | 50.68% |
Motif_588 | TL1ATSAR | TL1, a consensus sequence overrepresented in the promoter regions of all 13 NPR1-responsive ER-resident genes surveyed; NPR1 is Nonexpressor of pathogenesis-related genes 1, also known as NIM1 | | 50.67% |
Motif_12 | CEREGLUBOX2PSLEGA | cereal glutenin box in pea legumin gene (legA); sequence homologous to the cereal glutenin gene control element (-300 element) | | 50.64% |
Matrix_515 | ddf2; ATCBF3; CBF1; CBF4 | Not Available | | 50.61% |
Matrix_397 | GT2L | Not Available | | 50.61% |
Matrix_88 | AHL12 | Not Available | | 50.49% |
Matrix_446 | LBD16 | Not Available | | 50.49% |
Matrix_521 | AHL20 | Not Available | | 50.48% |
Matrix_387 | ORA47 | Not Available | | 50.48% |
Matrix_77 | PRR5 | Not Available | | 50.47% |
Motif_476 | XYLAT | cis-element identified among the promoters of the core xylem gene set | | 50.46% |
Matrix_8 | KAN1 | Not Available | | 50.45% |
Matrix_333 | GATA3 | Not Available | | 50.44% |
Matrix_314 | WRKY65; WRKY14; WRKY35; WRKY69; WRKY16; ATWRKY52 | Not Available | | 50.36% |
Matrix_246 | ARR10 | Molecular structure of the GARP family of plant Myb-related DNA binding motifs of the Arabidopsis response regulators | | 50.34% |
Matrix_128 | TGA2 | Not Available | | 50.33% |
Matrix_254 | MYB52 | Not Available | | 50.32% |
Matrix_380 | ATMYR1 | Not Available | | 50.31% |
Matrix_38 | SPL14 | Not Available | | 50.21% |
Matrix_70 | GATA26 | Not Available | | 50.19% |
Matrix_122 | ABF1; AREB2 | Not Available | | 50.14% |
Matrix_236 | CCA1 | Not Available | | 50.09% |
Matrix_370 | WRKY50; WRKY51 | Not Available | | 50.08% |
Matrix_151 | ASIL1 | Not Available | | 50.08% |
Matrix_93 | YAB5 | Not Available | | 50.04% |
Matrix_183 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 50.02% |