PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_71
Name: ATHB7
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_302	HAT1; HAT2	Not Available	91.32%
Matrix_461	ATHB12	Not Available	90.07%
Matrix_435	ATHB51	Not Available	83.25%
Matrix_351	HAT9; ATHB-4; ATHB2; HAT22; HAT14	Not Available	80.91%
Matrix_93	YAB5	Not Available	74.23%
Matrix_182	ATHB6	Not Available	73.67%
Matrix_131	HDG12; EDT1; GL2; HDG8	Not Available	72.08%
Matrix_103	ATHB1	The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities	71.99%
Matrix_347	WOX14; WOX10	Not Available	71.54%
Motif_169	ATHB2 binding site motif	Recognition sequence of Arabidopsis Athb-2 protein; Athb-2 protein has a HD-Zip motif (homeodomain (HD) with a closely linked leucine zipper motif (Zip)); The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities	71.22%
Motif_87	AGL22; AGL20; AGL24	Regulation of floral patterning by flowering time genes	70.69%
Matrix_303	ATWOX13	Not Available	70.16%
Motif_352	ATHB5 binding site motif	Consensus binding sequence for Arabidopsis class I HDzip (Homeodomein-leucine zipper) protein, ATHB5; ATHB5 protein forms dimers in solution; ATHB5 and ATHB6 exhibit identical DNA binding specificities; ATHB5 forms heterodimers with other class I HDzip proteins; DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro	70.10%
Matrix_283	GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC	Not Available	68.38%
Matrix_441	ATHB5	Not Available	68.34%
Motif_41	ARR2	Arabidopsis ARR1 and ARR2 response regulators operate as transcriptional activators	68.06%
Matrix_87	AT1G19000	Not Available	67.63%
Motif_277	ATHB1 binding site motif	Recognition sequence of Arabidopsis Athb-1 protein; Athb-1 protein has a HD-Zip motif (homeodomain (HD) with a closely linked leucine zipper motif (Zip)); HD-Zip domain binds to DNA as a dimer; The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities	67.56%
Motif_464	ARR1; ARR2	Arabidopsis ARR1 and ARR2 response regulators operate as transcriptional activators	67.11%
Matrix_512	HAT3	Not Available	67.01%
Motif_91	SORLIP4AT	one of Sequences Over-Represented in Light-Induced Promoters (SORLIPs) in Arabidopsis; Computationally identified phyA-induced motifs; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data	66.64%
Matrix_81	YAB1	Not Available	65.93%
Matrix_318	ATHB16	Not Available	65.14%
Matrix_431	ATHB21; HB-3	Not Available	65.00%
Matrix_157	LHY; RVE2	Not Available	64.44%
Matrix_401	MYB55	Not Available	63.65%
Matrix_327	ARR11	Not Available	63.01%
Matrix_8	KAN1	Not Available	62.94%
Motif_285	HDZIP2ATATHB2	Binding site of the Arabidopsis homeobox gene (ATHB-2) found in its own promoter; Located between -72 and -80; Similar to the HD-ZIP-2 binding consensus sequence; ATHB-2 is regulated by light signals which function as a negative autoregulator of its own gene	62.81%
Matrix_308	INO	Not Available	62.73%
Matrix_62	HAT5	Not Available	62.69%
Motif_624	ATHB6 binding site motif	Consensus binding sequence for Arabidopsis homeodomain-leucine zipper protein, ATHB6; ATHB6 is a target of the protein phosphatase ABI1 and regulates hormone responses; Homeodomain protein ATHB6 is a target of the protein phosphatase ABI1 and regulates hormone responses in Arabidopsis	62.37%
Matrix_434	ARR11	Not Available	61.99%
Matrix_274	EDF3	Not Available	61.77%
Matrix_9	AT5G04760	Not Available	61.36%
Matrix_495	HD-GL2-1; ANL2	Not Available	61.15%
Matrix_366	ARR14	Not Available	60.95%
Motif_381	GATA-2; GATA-4; GATA-3; GATA-1	Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics	60.83%
Matrix_212	ATHB-12	Not Available	60.60%
Matrix_206	CUC1; ANAC100	Not Available	60.42%
Matrix_408	GATA12	Not Available	60.38%
Matrix_425	TIFY2A	Not Available	60.32%
Matrix_336	AT5G08520	Not Available	60.21%
Matrix_88	AHL12	Not Available	60.05%
Matrix_225	MYB52	Not Available	59.85%
Matrix_491	AT1G68670; AT3G25790	Not Available	59.81%
Matrix_508	APL; AT3G12730; AT3G24120; UNE16	Not Available	59.76%
Matrix_195	GATA2; GATA4	Not Available	59.58%
Matrix_380	ATMYR1	Not Available	59.56%
Motif_298	GMHDLGMVSPB	Binding site of the soybean homeodomein leucine zipper proteins (GmHdl56, GmHdl57); Found in the phosphate response domain of the soybean VspB promoter; Located between -536 and -527; VspB encodes vacuolar glycoprotein acid phosphatase that serve as vegetative storage protein	59.46%
Matrix_41	anac058	Not Available	59.26%
Matrix_32	AHL25	Not Available	59.21%
Matrix_483	ICU4	Not Available	59.16%
Matrix_259	AT1G50680; AT1G51120	Not Available	59.14%
Motif_345	GT-1	Molecular dissection of GT-1 from Arabidopsis	59.10%
Matrix_97	APRR2	Not Available	59.04%
Matrix_12	EIN3; EIL2	Not Available	58.80%
Matrix_276	AT1G01520; AT3G09600; AT4G01280; LCL1; AT5G52660	Not Available	58.79%
Matrix_203	GATA9; GATA12	Not Available	58.77%
Motif_347	OPAQUE2ZMB32	opaque-2 binding site of maize b-32 (type I ribosome-inactivating protein gene); O2; O2S; O2S and GARE form a gibberellin response complex (GARC)	58.68%
Matrix_505	GATA8	Not Available	58.67%
Matrix_391	AHL20	Not Available	58.66%
Matrix_13	HAT5	Not Available	58.57%
Matrix_447	RVE1	Not Available	58.43%
Motif_675	FUS3; ABI3	Gene regulation during late embryogenesis: the RY motif of maturation-specific gene promoters is a direct target of the FUS3 gene product	58.37%
Matrix_471	KAN4	Not Available	58.33%
Matrix_501	DAG2	Not Available	58.12%
Matrix_69	AT2G03500	Not Available	57.85%
Matrix_284	KAN2; KAN3; KAN; KAN4	Not Available	57.69%
Motif_656	AG BS in SUP	Dimerization specificity of Arabidopsis MADS domain homeotic proteins APETALA1, APETALA3, PISTILLATA, and AGAMOUS	57.59%
Matrix_54	AHL20	Not Available	57.59%
Matrix_249	WRKY11	Not Available	57.51%
Matrix_231	HDG2; HDG3; ATML1; HB-7	Not Available	57.36%
Matrix_99	DOF4.7	Not Available	57.35%
Matrix_114	EPR1; AT3G10113	Not Available	57.33%
Motif_582	ARR1; ARR2	Arabidopsis ARR1 and ARR2 response regulators operate as transcriptional activators	57.31%
Matrix_72	CDF2	Not Available	57.13%
Matrix_210	ARR1	Not Available	57.08%
Matrix_162	AtPHR1	Not Available	56.97%
Matrix_254	MYB52	Not Available	56.79%
Matrix_226	GATA1	Not Available	56.77%
Motif_436	WRKY18	Identification of genes encoding receptor-like protein kinases as possible targets of pathogen- and salicylic acid-induced WRKY DNA-binding proteins in Arabidopsis	56.70%
Motif_456	FUS3; ABI3	Gene regulation during late embryogenesis: the RY motif of maturation-specific gene promoters is a direct target of the FUS3 gene product	56.69%
Matrix_469	NAC041; NAC083	Not Available	56.62%
Matrix_161	MYBC1; AT3G10760; LUX; AT5G05090; AT5G59570	Not Available	56.62%
Motif_131	P1BS	PHR1-binding sequence found in the upstream regions of phosphate starvation responsive genes from several plant species; phr1 (phosphate starvation response 1) gene codes for PHR1 protein related to PSR1 gene in C. reinhardtii	56.62%
Matrix_429	KAN4	Not Available	56.52%
Matrix_4	ARR14	Not Available	56.42%
Matrix_218	TIFY2B; TIFY1	Not Available	56.41%
Matrix_332	SPT; ALC	Not Available	56.37%
Matrix_201	AT1G74840	Not Available	56.30%
Matrix_444	AT1G19485; AT4G17950	Not Available	56.30%
Motif_142	HDZIPIIIAT	Ath b-9 HD-Zip (HD-Zip-9), a member of a small family of HD-Zip proteins (HD-ZIP III), in Arabidopsis recognize this sequence	56.24%
Motif_367	FUS3	Gene regulation during late embryogenesis: the RY motif of maturation-specific gene promoters is a direct target of the FUS3 gene product	56.10%
Matrix_423	AT3G04030	Not Available	56.07%
Matrix_241	HB-1; AT5G44180	Not Available	55.98%
Matrix_361	AT1G25550	Not Available	55.94%
Matrix_16	AT3G04450; PHL1	Not Available	55.93%
Matrix_168	AHL25	Not Available	55.73%
Matrix_314	WRKY65; WRKY14; WRKY35; WRKY69; WRKY16; ATWRKY52	Not Available	55.62%
Matrix_233	MYC3	Not Available	55.35%
Matrix_65	POC1; PIL1	Not Available	55.33%
Matrix_416	ASL5	Not Available	55.28%
Matrix_85	SPL5	Not Available	55.20%
Matrix_199	AT1G69170; SPL9; SPL15; SPL13A; SPL13B	Not Available	55.13%
Matrix_500	WRKY43	Not Available	55.12%
Matrix_324	AT2G01060	Not Available	55.08%
Motif_430	WRKY11	Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function	55.01%
Motif_363	WRKY26	Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function	55.01%
Matrix_174	ZAT2	Not Available	54.87%
Matrix_46	AT4G21895	Not Available	54.86%
Matrix_316	WRKY15; WRKY39; WRKY7; WRKY74	Not Available	54.64%
Matrix_185	AHL25	Not Available	54.57%
Matrix_21	HSFC1	Not Available	54.51%
Matrix_227	AT1G64620	Not Available	54.46%
Matrix_494	OBP4	Not Available	54.32%
Matrix_44	CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2	Not Available	54.27%
Matrix_271	AT3G16350	Not Available	54.19%
Matrix_411	DOF5.6	Not Available	54.13%
Matrix_350	ARR14	Not Available	54.10%
Matrix_346	AtMYB70; MYB73	Not Available	54.06%
Matrix_6	AT1G70000	Not Available	54.01%
Motif_341	NAM	Molecular characterization of AtNAM: a member of the Arabidopsis NAC domain superfamily	53.98%
Motif_376	WRKY63	ABO3, a WRKY transcription factor, mediates plant responses to abscisic acid and drought tolerance in Arabidopsis	53.92%
Motif_214	TAC1	Regulation of telomerase in Arabidopsis by BT2, an apparent target of TELOMERASE ACTIVATOR1	53.80%
Matrix_328	AT1G76580	Not Available	53.78%
Matrix_177	ADOF2	Not Available	53.71%
Matrix_255	cdf3	Not Available	53.70%
Motif_523	GATA-2; GATA-4; GATA-3; GATA-1	Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics	53.68%
Matrix_150	UNE10; PIF7	Not Available	53.64%
Matrix_60	AT1G01260; AT5G57150	Not Available	53.63%
Matrix_286	GATA7	Not Available	53.44%
Motif_325	WRKY18	Identification of genes encoding receptor-like protein kinases as possible targets of pathogen- and salicylic acid-induced WRKY DNA-binding proteins in Arabidopsis	53.43%
Matrix_152	EIL1; AT5G65100	Not Available	53.38%
Matrix_27	ATAIB; ATNIG1	Not Available	53.34%
Matrix_260	CAMTA3	Not Available	53.26%
Motif_610	GATA-2; GATA-4; GATA-3; GATA-1	Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics	53.25%
Matrix_125	AHL12	Not Available	53.22%
Matrix_236	CCA1	Not Available	53.22%
Matrix_142	ZFP8	Not Available	53.18%
Matrix_392	ARR2	Not Available	53.08%
Matrix_240	AT4G29000	Not Available	53.06%
Matrix_56	BZIP17; BZIP28; BZIP49	Not Available	53.04%
Matrix_178	HSFB2A	Not Available	53.04%
Matrix_357	WRKY61; WRKY6; WRKY9; WRKY36; WRKY47; WRKY42; WRKY31; WRKY72	Not Available	52.99%
Matrix_76	GATA10	Not Available	52.97%
Matrix_515	ddf2; ATCBF3; CBF1; CBF4	Not Available	52.91%
Matrix_490	AtMYB77; ATMYB44	Not Available	52.83%
Matrix_365	AT1G10120; AT1G25330; CIB5; AT1G68920; AT3G23690; CIB1	Not Available	52.71%
Matrix_522	GATA11; GATA13	Not Available	52.66%
Matrix_258	WOX13	Not Available	52.65%
Motif_284	GT-2	DNA binding factor GT-2 from Arabidopsis	52.65%
Matrix_14	ZCW32; AT5G62610	Not Available	52.57%
Matrix_320	MYC4	Not Available	52.47%
Matrix_106	AT5G47390	Not Available	52.43%
Matrix_268	EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105	Not Available	52.41%
Matrix_167	ZAT6	Not Available	52.36%
Matrix_519	ATDOF2.4	Not Available	52.35%
Matrix_165	KNAT1	Not Available	52.35%
Matrix_181	Dof5.7	Not Available	52.33%
Motif_282	D4GMAUX28	D4; DNase I protected sequence found in the soybean auxin responsive gene, Aux28, promoter; D1 and D4 share a very similar core sequence TAGTXXCTGT and TAGTXCTGT, respectively; D1/D4-like sequence were identified in several other auxin-responsive genes	52.31%
Matrix_197	NAP	Not Available	52.30%
Matrix_437	MYC2	Not Available	52.14%
Matrix_455	MYB111	Not Available	52.13%
Motif_386	WRKY11	Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function	52.07%
Matrix_415	WRKY27	Not Available	52.05%
Matrix_78	AT3G45610	Not Available	51.95%
Matrix_143	GATA14; GATA6; GATA5	Not Available	51.95%
Matrix_10	STY1	Not Available	51.94%
Matrix_211	MYB3	Not Available	51.93%
Matrix_129	ABF1	Not Available	51.87%
Matrix_151	ASIL1	Not Available	51.77%
Matrix_256	IXR11; KNAT5; KNAT4; KNAT3	Not Available	51.66%
Matrix_427	ZAT14	Not Available	51.65%
Motif_414	ABI3	Gene regulation during late embryogenesis: the RY motif of maturation-specific gene promoters is a direct target of the FUS3 gene product	51.61%
Motif_40	MRNASTA2CRPSBD	mRNA stability determinant found in 5'-UTR of psbD mRNA of Chlamydomonas reinhardtii; Required for the stable accumulation; Located near position -30 relative to the AUG initiation codon	51.59%
Matrix_322	NST3; ANAC015; BRN2	Not Available	51.55%
Matrix_511	AT1G05805; AT1G35460; AT1G51140; AT2G42280; AT2G43140; AT4G09180	Not Available	51.53%
Matrix_313	ATMYB65; MYB33	Not Available	51.32%
Matrix_202	WRKY71; WRKY28; WRKY8	Not Available	51.28%
Matrix_38	SPL14	Not Available	51.22%
Matrix_84	AtGRF6	Not Available	51.17%
Motif_231	EIN3	Ethylene signaling in Arabidopsis involves feedback regulation via the elaborate control of EBF2 expression by EIN3	51.15%
Matrix_145	GBF4; AT5G44080	Not Available	51.12%
Matrix_404	OBP4	Not Available	51.05%
Matrix_315	MYB111	Not Available	51.04%
Matrix_337	MYB46	Not Available	51.01%
Motif_378	WRKY6	Targets of AtWRKY6 regulation during plant senescence and pathogen defense	51.01%
Matrix_312	ARF11; MP; ARF6; IAA21; ARF8; ARF4	Not Available	50.89%
Motif_427	LS7ATPR1	LS7; A positive salicylic acid-inducible element found in the Arabidopsis PR-1 gene promoter; Binding site of TGA1; NPR1 increased the binding of TGA2 to the element; NPR1 is essential in activating systemic, inducible plant defense responses; TGA6 expressed in roots in young seedlings; TGA2.1 is a direct transcriptional activator; TGA2.2 stabilizes TGA2.1 binding; The Arabidopsis NPR1/NIM1 protein enhances the DNA binding activity of a subgroup of the TGA family of bZIP transcription factors	50.88%
Motif_422	SP8BFIBSP8BIB	One of SPBF binding site (SP8b); Found at -330, -220, and -200 of gSPO-B1 (sporamin) gene, and also at -80 of gB-Amy (beta-amylase) gene; SP8BF recognizes both SP8a and SP8b sequences; See also SP8BFIBSP8AIB; SP8BF activity is also found in tobacco; SP8b found in the 5' upstream region of three differnt genes coding for sporamin and beta-amylase; Binding site of SPF1; SPF1 also binds to the SP8b	50.83%
Motif_495	TRANSINITMONOCOTS	Context sequence of translational initiation codon in monocots	50.78%
Matrix_418	KNAT6; KNAT2	Not Available	50.75%
Motif_477	MYB1; MYB2	An Arabidopsis myb homolog is induced by dehydration stress and its gene product binds to the conserved MYB recognition sequence;Evidence for a role for AtMYB2 in the induction of the Arabidopsis alcohol dehydrogenase gene (ADH1) by low oxygen	50.69%
Motif_207	MAMMALENHAN	Core sequence in enhancers from polyoma virus and from the IgM heavy chain gene	50.68%
Matrix_280	TCP24; TCP1; BRC2; ATTCP18	Not Available	50.67%
Matrix_141	AT3G25990	Not Available	50.58%
Motif_581	AP1 BS in AP3	The CArG boxes in the promoter of the Arabidopsis floral organ identity gene APETALA3 mediate diverse regulatory effects	50.53%
Matrix_160	RVE1	Not Available	50.41%
Matrix_521	AHL20	Not Available	50.35%
Matrix_279	HRS1	Not Available	50.34%
Matrix_472	ZN_C2_H2	Not Available	50.27%
Matrix_341	HMGA	Not Available	50.24%
Matrix_67	GLK1	Not Available	50.24%
Motif_533	Bellringer/replumless/pennywise BS3 IN AG	Repression of AGAMOUS by BELLRINGER in Floral and Inflorescence Meristems	50.18%
Matrix_204	WOX13	Not Available	50.12%
Matrix_22	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	50.12%
Motif_263	RYREPEATVFLEB4; ABI3	RY repeat motif; quantitative seed expression; Gene: Vicia faba LeB4; Soybean glycinin (Gy2); other dicot and monocot seed protein genes; Sph box found in rice Osem gene promoter; Binding site of Arabidopsis B3-domain-containing transcription factor FUS3; TRAB1, bZIP transcription factor, interacts with VP1 and mediates abscisic acid-induced transcritption; FUS3 protein physically interact with two RY elements present in the AtGA3ox promoter;RY repeats are conserved in the 5 prime-flanking region of legume seed protein genes. Gene regulation during late embryogenesis: the RY motif of maturation-specific gene promoters is a direct target of the FUS3 gene product	50.11%
Motif_382	CATATGGMSAUR	Sequence found in NDE element in soybean SAUR (Small Auxin-Up RNA) 15A gene promoter; Involved in auxin responsiveness	50.11%
Motif_145	MYCATERD1	MYC recognition sequence (from -466 to -461) necessary for expression of erd1 (early responsive to dehydration) in dehydrated Arabidopsis; NAC protein bound specifically to the CATGTG motif; NAC protein bound specifically to the CATGTG motif	50.11%
Motif_221	MYBCORE	Binding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesis	50.05%
Matrix_113	ABI5	Not Available	50.03%