PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_48
Name: PI
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_269	FHY3/FAR1	Not Available	74.32%
Matrix_115	AGL15	Not Available	74.15%
Matrix_219	AGL15	Not Available	73.24%
Matrix_439	AP3	Not Available	72.29%
Matrix_39	AP1	Not Available	71.43%
Matrix_83	PRR5	Not Available	69.28%
Matrix_172	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	68.77%
Matrix_9	AT5G04760	Not Available	64.33%
Matrix_413	RAV1	Not Available	63.95%
Matrix_298	RAV1	Not Available	63.95%
Matrix_29	AP1	Not Available	62.34%
Matrix_176	MYB98	Not Available	58.69%
Matrix_153	AP2	Not Available	58.26%
Matrix_4	ARR14	Not Available	57.63%
Matrix_440	LFY	Not Available	57.60%
Motif_654	DR5GMGH3	DR5; A highly active synthetic auxin response element; Created by site-directed mutations in a natural composite AuxRE found in the soybean GH3 promoter; The DR5 showed greater auxin responsiveness; Binding site of ARF1	57.27%
Matrix_210	ARR1	Not Available	57.23%
Matrix_489	RAV1	Not Available	56.78%
Matrix_237	MYB55	Not Available	56.41%
Motif_668	TCA1MOTIF	TCA-1 (tobacco nuclear protein 1) binding site; Related to salicylic acid-inducible expression of many genes; Found in barley beta-1,3-glucanase and over 30 different plant genes which are known to be induced by one or more forms of stress; A similar sequence (TCATTTCTT) was found in tobacco Tnt1 retrotransposon promoter	56.41%
Matrix_154	AT1G22190; AT1G36060; AT1G64380; RAP2.4; AT2G20880; AT2G22200; AT4G13620; AT4G28140; AT4G39780; AT5G65130	Not Available	56.06%
Matrix_77	PRR5	Not Available	56.03%
Matrix_55	PIF3	Not Available	56.02%
Motif_69	CTRMCAMV35S	CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA	55.80%
Matrix_458	MGP; AT1G14580; AtIDD7; AtIDD5; AtIDD4; AtIDD12; JKD; AT5G66730	Not Available	55.80%
Matrix_336	AT5G08520	Not Available	55.80%
Matrix_161	MYBC1; AT3G10760; LUX; AT5G05090; AT5G59570	Not Available	55.50%
Matrix_268	EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105	Not Available	55.37%
Matrix_108	PIF4	Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses	54.96%
Matrix_183	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	54.68%
Matrix_231	HDG2; HDG3; ATML1; HB-7	Not Available	54.28%
Matrix_352	LEC2	Not Available	54.26%
Matrix_395	AT1G19210; ORA47; AT4G31060; AT5G21960	Not Available	54.21%
Matrix_446	LBD16	Not Available	54.04%
Matrix_6	AT1G70000	Not Available	54.01%
Matrix_157	LHY; RVE2	Not Available	53.93%
Matrix_97	APRR2	Not Available	53.88%
Matrix_499	ARR18	Not Available	53.82%
Matrix_1	TOE2	Not Available	53.71%
Matrix_34	RAV1_2	RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants	53.68%
Matrix_467	RAV1	Not Available	53.68%
Matrix_477	RAV1	Not Available	53.68%
Matrix_406	ATERF-7	Not Available	53.61%
Matrix_333	GATA3	Not Available	53.59%
Matrix_431	ATHB21; HB-3	Not Available	53.50%
Matrix_259	AT1G50680; AT1G51120	Not Available	53.49%
Matrix_491	AT1G68670; AT3G25790	Not Available	53.40%
Matrix_497	AP3	Not Available	53.20%
Matrix_462	ATERF-8	Not Available	53.16%
Matrix_351	HAT9; ATHB-4; ATHB2; HAT22; HAT14	Not Available	53.15%
Matrix_308	INO	Not Available	53.14%
Matrix_53	MYC3	Not Available	53.07%
Matrix_271	AT3G16350	Not Available	53.00%
Matrix_422	TOE1	Not Available	52.79%
Matrix_109	GBF3	Not Available	52.69%
Matrix_69	AT2G03500	Not Available	52.57%
Motif_290	CCTCGTGTCTCGMGH3	Sequence found in D1 element in Soybean GH3 gene promoter; Showed constitutive activity with TGTCTC element; Confers auxin inducibility; Binding site of nuclear protein	52.44%
Matrix_50	ATERF14; AT5G43410	Not Available	52.41%
Matrix_495	HD-GL2-1; ANL2	Not Available	52.30%
Matrix_8	KAN1	Not Available	52.26%
Matrix_212	ATHB-12	Not Available	52.23%
Matrix_204	WOX13	Not Available	52.22%
Motif_55	MRNASTA1CRPSBD	mRNA stability determinant found in 5'-UTR of psbD mRNA of Chlamydomonas reinhardtii; Required for the stable accumulation; Located within the first 12 nucleotides of the leader region	52.21%
Matrix_286	GATA7	Not Available	52.19%
Matrix_393	REM1	Not Available	52.16%
Matrix_284	KAN2; KAN3; KAN; KAN4	Not Available	52.08%
Matrix_387	ORA47	Not Available	52.05%
Matrix_70	GATA26	Not Available	52.04%
Matrix_317	AT1G06070; AT2G31370; AT2G40620	Not Available	52.02%
Matrix_93	YAB5	Not Available	51.99%
Matrix_12	EIN3; EIL2	Not Available	51.94%
Matrix_453	EIL3	Not Available	51.93%
Matrix_16	AT3G04450; PHL1	Not Available	51.88%
Matrix_324	AT2G01060	Not Available	51.77%
Matrix_361	AT1G25550	Not Available	51.69%
Matrix_56	BZIP17; BZIP28; BZIP49	Not Available	51.69%
Matrix_106	AT5G47390	Not Available	51.68%
Matrix_328	AT1G76580	Not Available	51.68%
Matrix_454	AT1G77200; ATERF38; AT4G16750; AT5G52020	Not Available	51.68%
Motif_681	TDBA12NTCHN50	TDBA12 binding site found in tobacco basic class I chitinase gene (CHN50); Elicitor response element; TDBA12 belongs to WRKY proteins that appear to be unique to plants; TDBA12 is activated by TMV infection in resistant tobacco plant and by plant defense signal molecule SA	51.64%
Matrix_331	GBF1	Not Available	51.63%
Matrix_206	CUC1; ANAC100	Not Available	51.57%
Matrix_173	ZAP1	Not Available	51.54%
Motif_406	ABREBZMRAB28	ABA-responsive element (ABRE B) found at -105 to -96 in maize rab28; Maize rab28 is ABA-inducible in embryos and vegetative tissues	51.39%
Matrix_122	ABF1; AREB2	Not Available	51.37%
Matrix_186	FHY3	Not Available	51.34%
Matrix_264	ATAREB1	Not Available	51.32%
Matrix_59	AT4G00238; AT4G00250	Not Available	51.29%
Matrix_162	AtPHR1	Not Available	51.26%
Matrix_515	ddf2; ATCBF3; CBF1; CBF4	Not Available	51.22%
Matrix_471	KAN4	Not Available	51.21%
Matrix_143	GATA14; GATA6; GATA5	Not Available	51.19%
Matrix_456	bZIP60	Not Available	51.02%
Matrix_141	AT3G25990	Not Available	51.01%
Matrix_226	GATA1	Not Available	50.90%
Matrix_355	ERF10; ERF11	Not Available	50.89%
Matrix_283	GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC	Not Available	50.88%
Matrix_51	LFY	Not Available	50.82%
Matrix_326	AT5G07310; Rap2.6L; AT5G61890	Not Available	50.79%
Matrix_322	NST3; ANAC015; BRN2	Not Available	50.76%
Matrix_151	ASIL1	Not Available	50.74%
Matrix_258	WOX13	Not Available	50.68%
Matrix_152	EIL1; AT5G65100	Not Available	50.64%
Matrix_430	TOE2	Not Available	50.61%
Matrix_175	Dof5.7	Not Available	50.55%
Motif_438	CAMTA5; CAMTA1; CAMTA2; CAMTA3	Roles for Arabidopsis CAMTA transcription factors in cold-regulated gene expression and freezing tolerance	50.53%
Matrix_518	AT2G21230	Not Available	50.44%
Matrix_382	AT3G04850	Not Available	50.40%
Matrix_508	APL; AT3G12730; AT3G24120; UNE16	Not Available	50.37%
Matrix_17	WRKY22	Not Available	50.19%
Matrix_311	TGA1	Not Available	50.10%
Matrix_26	ATMYB3; MYB24	Not Available	50.08%
Matrix_22	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	50.05%
Matrix_75	WRKY29	Not Available	50.01%