PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_475
Name: AT5G64220
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_14	ZCW32; AT5G62610	Not Available	71.44%
Matrix_377	AT1G75490; DREB2C; AT2G40350; AT5G18450	Not Available	70.25%
Matrix_44	CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2	Not Available	69.37%
Matrix_374	AT5G07580; AT5G61590	Not Available	68.65%
Matrix_321	HRD	Not Available	67.03%
Matrix_243	RAP2.12; RAP2.2	Not Available	66.92%
Matrix_493	AT1G22985; AT1G71130	Not Available	64.87%
Matrix_91	CRF3	Not Available	63.36%
Matrix_99	DOF4.7	Not Available	63.27%
Matrix_151	ASIL1	Not Available	63.26%
Matrix_78	AT3G45610	Not Available	62.91%
Matrix_61	ATCBF3	Not Available	62.82%
Matrix_334	AT3G23230	Not Available	62.80%
Matrix_171	LBD3; LBD4	Not Available	62.55%
Matrix_111	ABF3	Not Available	62.49%
Matrix_261	ATERF-1	Not Available	62.49%
Matrix_454	AT1G77200; ATERF38; AT4G16750; AT5G52020	Not Available	62.27%
Matrix_416	ASL5	Not Available	61.70%
Matrix_80	BIM1	Not Available	61.43%
Matrix_142	ZFP8	Not Available	61.06%
Matrix_41	anac058	Not Available	60.91%
Motif_158	ZDNAFORMINGATCAB1	Z-DNA-forming sequence found in the Arabidopsis chlorophyll a/b binding protein gene (cab1) promoter; Involved in light-dependent developmental expression of the gene; Z-box; Activation of Z-box containing promoters is regulated by downstream regulatory components, COP1 and HY5; phyB and CRY1 photoreceptors act redundantly to induce Z-box containing promoters in white light; Identification of upstream regulatory elements involved in the developmental expression of the Arabidopsis thaliana cab1 gene	60.81%
Matrix_287	ERF2	Not Available	60.64%
Matrix_57	WIN1; SHN3; SHN2	Not Available	60.62%
Matrix_38	SPL14	Not Available	60.57%
Matrix_389	ILR3	Not Available	59.94%
Matrix_206	CUC1; ANAC100	Not Available	59.86%
Motif_218	ABRERATCAL	ABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABRE	59.73%
Matrix_177	ADOF2	Not Available	59.64%
Matrix_155	RAP2.6; ERF110; ABR1	Not Available	59.33%
Matrix_145	GBF4; AT5G44080	Not Available	59.27%
Matrix_409	DEAR3	Not Available	59.21%
Matrix_373	E2FE	Not Available	59.20%
Matrix_506	DRNL; ATERF-4	Not Available	59.12%
Matrix_188	SPL4	Not Available	58.94%
Matrix_476	bHLH115; bHLH34	Not Available	58.76%
Matrix_50	ATERF14; AT5G43410	Not Available	58.54%
Matrix_320	MYC4	Not Available	58.47%
Matrix_101	ERF5	Not Available	58.40%
Matrix_255	cdf3	Not Available	58.27%
Matrix_35	YAB5; YAB3	Not Available	58.24%
Matrix_224	ERF1	Not Available	58.08%
Matrix_59	AT4G00238; AT4G00250	Not Available	57.57%
Matrix_233	MYC3	Not Available	57.57%
Matrix_516	ANAC038; ANAC079	Not Available	57.34%
Matrix_158	AT1G03040; LRL1; UNE12; LRL2; LRL3	Not Available	57.29%
Matrix_330	MYC2; TT8	Not Available	57.25%
Matrix_137	SPL1; SPL12	Not Available	57.24%
Matrix_60	AT1G01260; AT5G57150	Not Available	57.21%
Matrix_411	DOF5.6	Not Available	57.21%
Matrix_326	AT5G07310; Rap2.6L; AT5G61890	Not Available	57.19%
Matrix_150	UNE10; PIF7	Not Available	57.16%
Matrix_365	AT1G10120; AT1G25330; CIB5; AT1G68920; AT3G23690; CIB1	Not Available	57.16%
Matrix_86	CRF5; CRF6; CRF4	Not Available	56.88%
Matrix_323	BIM3	Not Available	56.86%
Matrix_248	ZFP5	Not Available	56.82%
Matrix_200	PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815	Not Available	56.74%
Matrix_465	MYC4	Not Available	56.67%
Matrix_300	bZIP68; bZIP16	Not Available	56.64%
Matrix_259	AT1G50680; AT1G51120	Not Available	56.61%
Motif_349	QARBNEXTA	QAR (quantitative activator region) in promoter region of Brassica napus extA extensin gene	56.59%
Matrix_296	GBF2	Not Available	56.55%
Matrix_277	RAP2.6	Not Available	56.48%
Matrix_448	ATERF6	Not Available	56.45%
Motif_650	SITEIIAOSPCNA	Site IIa of rice PCNA (proliferating cell nuclear antigen) gene; Found at -197 to -188; Binding site for two nuclear proteins, PCF1 and PCF2; Suggested to be involved in meristematic tissue-specific expression; Resemble the conserved motif (T/GGTCCCAT) found in promoter regions of auxin-regulated genes; See AUXREPSIAA4	56.43%
Matrix_46	AT4G21895	Not Available	56.38%
Motif_74	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	56.36%
Matrix_426	CRF1; CRF2	Not Available	56.26%
Matrix_7	PIF4	Not Available	56.16%
Matrix_234	RAP2.3	Not Available	56.11%
Matrix_120	BEE2	Not Available	55.89%
Matrix_355	ERF10; ERF11	Not Available	55.86%
Matrix_272	DEAR4	Not Available	55.84%
Matrix_437	MYC2	Not Available	55.81%
Matrix_156	POC1	Not Available	55.80%
Matrix_449	BIM2	Not Available	55.36%
Motif_318	CGCGBOXAT	CGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRs	55.32%
Matrix_343	AT2G33710	Not Available	55.26%
Matrix_420	ANAC58	Not Available	55.26%
Matrix_487	AT1G29160	Not Available	55.12%
Matrix_227	AT1G64620	Not Available	54.88%
Matrix_433	ATERF1	Not Available	54.83%
Matrix_45	DRN	Not Available	54.79%
Matrix_460	NAM; anac025; ATNAC2	Not Available	54.71%
Matrix_418	KNAT6; KNAT2	Not Available	54.71%
Matrix_341	HMGA	Not Available	54.69%
Matrix_256	IXR11; KNAT5; KNAT4; KNAT3	Not Available	54.45%
Matrix_410	TOE2	Not Available	54.42%
Motif_256	RHE_element	Functional Conservation of a Root Hair Cell-Specific cis-Element in Angiosperms with Different Root Hair Distribution Patterns	54.26%
Matrix_307	RGL2; RGL3	Not Available	54.24%
Matrix_244	DREB2C	Not Available	54.18%
Matrix_221	SPL7	Not Available	54.11%
Matrix_92	AT1G33760	Not Available	54.02%
Matrix_484	ATERF13	Not Available	53.94%
Motif_633	PE2FNTRNR1A	pE2F (proximal E2F elemen) at -143bp of tobacco RNR1a promoter; E2F factors involved in gene induction at the G1/S transition of the cell cycle; Important for regulating specific RNR1a (ribonucleotide reductase large subunit) gene expression in response to UV-C irradiation	53.85%
Matrix_23	ANAC46	Not Available	53.83%
Matrix_129	ABF1	Not Available	53.76%
Matrix_84	AtGRF6	Not Available	53.69%
Matrix_415	WRKY27	Not Available	53.65%
Matrix_241	HB-1; AT5G44180	Not Available	53.62%
Matrix_363	RAP2.3	Not Available	53.58%
Matrix_37	GATA27	Not Available	53.43%
Matrix_152	EIL1; AT5G65100	Not Available	53.41%
Matrix_482	AT2G25650; AT4G00270	Not Available	53.31%
Matrix_27	ATAIB; ATNIG1	Not Available	53.26%
Matrix_20	ANAC030; NST1; NAC066	Not Available	53.17%
Motif_24	CAMTA3	Roles for Arabidopsis CAMTA transcription factors in cold-regulated gene expression and freezing tolerance	53.01%
Matrix_385	DEAR4	Not Available	53.00%
Matrix_423	AT3G04030	Not Available	52.97%
Matrix_197	NAP	Not Available	52.94%
Matrix_469	NAC041; NAC083	Not Available	52.93%
Matrix_322	NST3; ANAC015; BRN2	Not Available	52.91%
Matrix_283	GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC	Not Available	52.91%
Matrix_379	RHL41	Not Available	52.86%
Motif_329	AMMORESIIUDCRNIA1	Motifs (IIU and IID) found in the Chlamydomonas Nia1 gene promoter; Involved in ammonium-response; Located between -231 and -219 and also between -76 and -65; Involved in Nia1 transcription activation	52.81%
Matrix_313	ATMYB65; MYB33	Not Available	52.72%
Matrix_138	RRTF1	Not Available	52.64%
Matrix_336	AT5G08520	Not Available	52.62%
Matrix_85	SPL5	Not Available	52.52%
Matrix_65	POC1; PIL1	Not Available	52.52%
Matrix_239	AT5G04390	Not Available	52.52%
Matrix_100	AT1G48610	Not Available	52.49%
Matrix_126	RBE	Not Available	52.41%
Matrix_96	TMO6	Not Available	52.40%
Matrix_183	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	52.40%
Matrix_273	ANAC55	Not Available	52.39%
Matrix_519	ATDOF2.4	Not Available	52.37%
Matrix_223	MYB60; ATMYB31; ATMYB30; MYB94; MYBCOV1	Not Available	52.36%
Motif_617	ABRE3HVA1	ABA responsive element, ABRE3, found in barley HVA1 gene encoding a class 3 late embryogenesis-abundant protein; stress response	52.32%
Motif_407	CE3OSOSEM	CE3 (Coupling Element 3) found in the promoter of the rice Osem gene; Required for ABA-responsiveness and VP1 activation; Binding site of TRAB1; Motif A and CE3 are functionally equivalent; TRAB1, bZIP transcription factor, interacts with VP1 and mediates abscisic acid-induced transcritption	52.30%
Matrix_511	AT1G05805; AT1G35460; AT1G51140; AT2G42280; AT2G43140; AT4G09180	Not Available	52.24%
Matrix_146	ORA47	Not Available	52.21%
Matrix_395	AT1G19210; ORA47; AT4G31060; AT5G21960	Not Available	52.20%
Matrix_147	ERF3; AT1G80580	Not Available	52.16%
Motif_499	AtMYC2	A basic helix-loop-helix transcription factor in Arabidopsis, MYC2, acts as a repressor of blue light-mediated photomorphogenic growth	52.09%
Matrix_295	ERF1	Not Available	52.04%
Matrix_274	EDF3	Not Available	51.94%
Matrix_518	AT2G21230	Not Available	51.91%
Motif_338	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	51.91%
Matrix_12	EIN3; EIL2	Not Available	51.88%
Matrix_332	SPT; ALC	Not Available	51.84%
Matrix_394	DREB_U	Not Available	51.84%
Matrix_503	AT2G37430; AT3G53600	Not Available	51.83%
Matrix_64	PIF5	Not Available	51.83%
Matrix_378	ATERF1	Not Available	51.82%
Matrix_109	GBF3	Not Available	51.79%
Matrix_463	HAT3.1	Not Available	51.75%
Matrix_141	AT3G25990	Not Available	51.73%
Matrix_360	ORA59	Not Available	51.69%
Matrix_90	BEE1; BEE3; AT3G07340; AT5G48560; AT5G50915	Not Available	51.68%
Matrix_344	ATERF15; AT4G18450	Not Available	51.61%
Motif_566	AREB1; AREB2	Interaction between two cis-acting elements, ABRE and DRE, in ABA-dependent expression of Arabidopsis rd29A gene in response to dehydration and high-salinity stresses	51.55%
Matrix_333	GATA3	Not Available	51.40%
Matrix_63	ARR10	Not Available	51.28%
Matrix_402	TOE1	Not Available	51.19%
Matrix_286	GATA7	Not Available	51.13%
Matrix_436	AT3G49930; AZF1	Not Available	51.09%
Matrix_119	RRTF1	Not Available	50.92%
Matrix_17	WRKY22	Not Available	50.83%
Matrix_331	GBF1	Not Available	50.80%
Matrix_122	ABF1; AREB2	Not Available	50.79%
Matrix_75	WRKY29	Not Available	50.72%
Motif_495	TRANSINITMONOCOTS	Context sequence of translational initiation codon in monocots	50.70%
Matrix_263	WRKY33; WRKY19; WRKY32	Not Available	50.57%
Matrix_202	WRKY71; WRKY28; WRKY8	Not Available	50.56%
Matrix_190	ATERF1	Not Available	50.55%
Matrix_328	AT1G76580	Not Available	50.52%
Matrix_480	BES1	Not Available	50.50%
Matrix_198	STZ; C2H2; AZF3	Not Available	50.50%
Matrix_249	WRKY11	Not Available	50.44%
Matrix_280	TCP24; TCP1; BRC2; ATTCP18	Not Available	50.36%
Matrix_473	RRTF1	Not Available	50.30%
Matrix_3	WRKY48	Not Available	50.25%
Motif_498	SGBFGMGMAUX28	bZIP proteins SGBF-1 and SGBF-2 binding site in soybean GmAux28 gene promoter	50.24%
Motif_571	GBOXSORBCS1	G-box found in the spinach RBCS-1 gene promoter; Located between -219 and -212; G-box trimer confers relatively high level expression in roots	50.24%
Matrix_199	AT1G69170; SPL9; SPL15; SPL13A; SPL13B	Not Available	50.15%
Motif_141	BP5OSWX	OsBP-5 (a MYC protein) binding site in Wx promoter	50.06%