PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_444
Name: AT1G19485; AT4G17950
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_32	AHL25	Not Available	82.07%
Matrix_125	AHL12	Not Available	80.53%
Matrix_88	AHL12	Not Available	78.08%
Matrix_168	AHL25	Not Available	75.79%
Matrix_54	AHL20	Not Available	74.64%
Matrix_521	AHL20	Not Available	74.26%
Matrix_212	ATHB-12	Not Available	73.70%
Matrix_185	AHL25	Not Available	73.63%
Matrix_284	KAN2; KAN3; KAN; KAN4	Not Available	73.02%
Matrix_431	ATHB21; HB-3	Not Available	71.96%
Matrix_131	HDG12; EDT1; GL2; HDG8	Not Available	69.80%
Matrix_143	GATA14; GATA6; GATA5	Not Available	69.23%
Matrix_382	AT3G04850	Not Available	68.04%
Matrix_70	GATA26	Not Available	67.98%
Matrix_8	KAN1	Not Available	67.97%
Matrix_259	AT1G50680; AT1G51120	Not Available	67.55%
Matrix_236	CCA1	Not Available	67.23%
Matrix_333	GATA3	Not Available	66.86%
Matrix_483	ICU4	Not Available	66.81%
Matrix_354	AHL12	Not Available	66.57%
Matrix_240	AT4G29000	Not Available	66.25%
Matrix_182	ATHB6	Not Available	65.73%
Matrix_391	AHL20	Not Available	65.72%
Matrix_17	WRKY22	Not Available	65.72%
Matrix_328	AT1G76580	Not Available	65.42%
Matrix_442	AT5G62260	Not Available	65.26%
Matrix_227	AT1G64620	Not Available	64.94%
Matrix_75	WRKY29	Not Available	64.82%
Matrix_441	ATHB5	Not Available	64.81%
Motif_235	C8GCARGAT	Binding site of plant MADS-domain protein AGL15; CArG motif with a longer A/T-rich core;A variant of CArG motif, with a longer A/T-rich core; Binding site for AGL15 (AGAMOUS-like 15)	64.79%
Matrix_351	HAT9; ATHB-4; ATHB2; HAT22; HAT14	Not Available	64.70%
Matrix_93	YAB5	Not Available	64.51%
Matrix_341	HMGA	Not Available	64.30%
Matrix_276	AT1G01520; AT3G09600; AT4G01280; LCL1; AT5G52660	Not Available	64.25%
Matrix_453	EIL3	Not Available	64.08%
Matrix_160	RVE1	Not Available	63.75%
Matrix_383	CCA1	Not Available	63.61%
Matrix_231	HDG2; HDG3; ATML1; HB-7	Not Available	63.61%
Matrix_308	INO	Not Available	63.36%
Matrix_62	HAT5	Not Available	63.35%
Matrix_99	DOF4.7	Not Available	62.96%
Matrix_114	EPR1; AT3G10113	Not Available	62.83%
Matrix_489	RAV1	Not Available	62.70%
Matrix_263	WRKY33; WRKY19; WRKY32	Not Available	62.67%
Matrix_141	AT3G25990	Not Available	62.41%
Matrix_157	LHY; RVE2	Not Available	62.36%
Matrix_206	CUC1; ANAC100	Not Available	62.20%
Matrix_384	ATWRKY17	Not Available	61.83%
Matrix_12	EIN3; EIL2	Not Available	61.74%
Matrix_3	WRKY48	Not Available	61.74%
Matrix_72	CDF2	Not Available	61.69%
Matrix_103	ATHB1	The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities	61.68%
Matrix_97	APRR2	Not Available	61.49%
Matrix_152	EIL1; AT5G65100	Not Available	61.44%
Matrix_53	MYC3	Not Available	61.22%
Matrix_268	EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105	Not Available	61.22%
Matrix_46	AT4G21895	Not Available	61.21%
Matrix_37	GATA27	Not Available	61.20%
Matrix_501	DAG2	Not Available	61.03%
Motif_285	HDZIP2ATATHB2	Binding site of the Arabidopsis homeobox gene (ATHB-2) found in its own promoter; Located between -72 and -80; Similar to the HD-ZIP-2 binding consensus sequence; ATHB-2 is regulated by light signals which function as a negative autoregulator of its own gene	60.81%
Matrix_495	HD-GL2-1; ANL2	Not Available	60.74%
Matrix_51	LFY	Not Available	60.70%
Matrix_370	WRKY50; WRKY51	Not Available	60.69%
Matrix_491	AT1G68670; AT3G25790	Not Available	60.52%
Matrix_142	ZFP8	Not Available	60.49%
Matrix_435	ATHB51	Not Available	60.34%
Matrix_204	WOX13	Not Available	60.13%
Matrix_249	WRKY11	Not Available	59.95%
Matrix_151	ASIL1	Not Available	59.89%
Matrix_380	ATMYR1	Not Available	59.88%
Motif_277	ATHB1 binding site motif	Recognition sequence of Arabidopsis Athb-1 protein; Athb-1 protein has a HD-Zip motif (homeodomain (HD) with a closely linked leucine zipper motif (Zip)); HD-Zip domain binds to DNA as a dimer; The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities	59.72%
Matrix_523	FUSCA3	Not Available	59.64%
Matrix_241	HB-1; AT5G44180	Not Available	59.63%
Matrix_181	Dof5.7	Not Available	59.63%
Matrix_207	WRKY10; WRKY57; AT2G44745; ATWRKY13; WRKY49	Not Available	59.49%
Matrix_500	WRKY43	Not Available	59.31%
Matrix_508	APL; AT3G12730; AT3G24120; UNE16	Not Available	59.25%
Matrix_461	ATHB12	Not Available	59.02%
Matrix_434	ARR11	Not Available	58.98%
Matrix_205	AGL15	Not Available	58.89%
Matrix_69	AT2G03500	Not Available	58.70%
Matrix_429	KAN4	Not Available	58.67%
Matrix_505	GATA8	Not Available	58.65%
Matrix_313	ATMYB65; MYB33	Not Available	58.60%
Matrix_4	ARR14	Not Available	58.57%
Matrix_286	GATA7	Not Available	58.56%
Matrix_210	ARR1	Not Available	58.16%
Matrix_415	WRKY27	Not Available	58.10%
Motif_352	ATHB5 binding site motif	Consensus binding sequence for Arabidopsis class I HDzip (Homeodomein-leucine zipper) protein, ATHB5; ATHB5 protein forms dimers in solution; ATHB5 and ATHB6 exhibit identical DNA binding specificities; ATHB5 forms heterodimers with other class I HDzip proteins; DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro	58.10%
Matrix_162	AtPHR1	Not Available	57.89%
Matrix_177	ADOF2	Not Available	57.87%
Matrix_87	AT1G19000	Not Available	57.81%
Matrix_255	cdf3	Not Available	57.78%
Matrix_416	ASL5	Not Available	57.75%
Matrix_336	AT5G08520	Not Available	57.25%
Matrix_197	NAP	Not Available	57.10%
Matrix_318	ATHB16	Not Available	56.98%
Matrix_520	ARR14	Not Available	56.75%
Matrix_393	REM1	Not Available	56.71%
Matrix_100	AT1G48610	Not Available	56.70%
Matrix_16	AT3G04450; PHL1	Not Available	56.67%
Matrix_322	NST3; ANAC015; BRN2	Not Available	56.60%
Matrix_78	AT3G45610	Not Available	56.53%
Matrix_418	KNAT6; KNAT2	Not Available	56.48%
Matrix_102	WRKY21	Not Available	56.47%
Matrix_411	DOF5.6	Not Available	56.44%
Matrix_248	ZFP5	Not Available	56.42%
Matrix_41	anac058	Not Available	56.40%
Matrix_457	TGA2	Not Available	56.33%
Matrix_502	AT3G13040	Not Available	56.30%
Matrix_71	ATHB7	Not Available	56.30%
Matrix_423	AT3G04030	Not Available	56.21%
Matrix_59	AT4G00238; AT4G00250	Not Available	56.19%
Matrix_188	SPL4	Not Available	56.04%
Matrix_167	ZAT6	Not Available	55.92%
Matrix_361	AT1G25550	Not Available	55.88%
Matrix_316	WRKY15; WRKY39; WRKY7; WRKY74	Not Available	55.81%
Matrix_314	WRKY65; WRKY14; WRKY35; WRKY69; WRKY16; ATWRKY52	Not Available	55.73%
Matrix_85	SPL5	Not Available	55.68%
Matrix_447	RVE1	Not Available	55.62%
Matrix_202	WRKY71; WRKY28; WRKY8	Not Available	55.59%
Motif_624	ATHB6 binding site motif	Consensus binding sequence for Arabidopsis homeodomain-leucine zipper protein, ATHB6; ATHB6 is a target of the protein phosphatase ABI1 and regulates hormone responses; Homeodomain protein ATHB6 is a target of the protein phosphatase ABI1 and regulates hormone responses in Arabidopsis	55.53%
Matrix_9	AT5G04760	Not Available	55.51%
Matrix_302	HAT1; HAT2	Not Available	55.39%
Matrix_26	ATMYB3; MYB24	Not Available	55.35%
Matrix_81	YAB1	Not Available	55.26%
Matrix_421	GLK1	Not Available	55.22%
Motif_642	SEF1MOTIF	SEF1 (soybean embryo factor 1) binding motif; sequence found in 5'-upstream region (-640; -765) of soybean beta-conglicinin (7S globulin) gene	55.11%
Motif_169	ATHB2 binding site motif	Recognition sequence of Arabidopsis Athb-2 protein; Athb-2 protein has a HD-Zip motif (homeodomain (HD) with a closely linked leucine zipper motif (Zip)); The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities	55.06%
Matrix_357	WRKY61; WRKY6; WRKY9; WRKY36; WRKY47; WRKY42; WRKY31; WRKY72	Not Available	55.05%
Matrix_112	TBP2; TFIID-1	Not Available	54.88%
Matrix_67	GLK1	Not Available	54.85%
Matrix_38	SPL14	Not Available	54.84%
Matrix_226	GATA1	Not Available	54.80%
Matrix_283	GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC	Not Available	54.73%
Matrix_199	AT1G69170; SPL9; SPL15; SPL13A; SPL13B	Not Available	54.54%
Matrix_427	ZAT14	Not Available	54.48%
Matrix_324	AT2G01060	Not Available	54.46%
Matrix_487	AT1G29160	Not Available	54.40%
Matrix_220	WRKY18	Not Available	54.36%
Matrix_494	OBP4	Not Available	54.34%
Matrix_280	TCP24; TCP1; BRC2; ATTCP18	Not Available	54.15%
Matrix_44	CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2	Not Available	54.09%
Matrix_84	AtGRF6	Not Available	54.06%
Matrix_512	HAT3	Not Available	54.01%
Matrix_52	ZAT18	Not Available	53.93%
Matrix_307	RGL2; RGL3	Not Available	53.89%
Matrix_262	ATGRP2B; CSDP2	Not Available	53.87%
Motif_198	CARGATCONSENSUS	CArG consensus sequence found in the promoter of Arabidopsis SOC1 which is the MADS-box flowering-time gene; FLC is a component of the vernalization (low-temperature) pathway binds directly to this site and blocks transcriptional activation of SOC1 by CONSTANS (CO)	53.79%
Matrix_271	AT3G16350	Not Available	53.76%
Matrix_274	EDF3	Not Available	53.70%
Matrix_519	ATDOF2.4	Not Available	53.50%
Matrix_256	IXR11; KNAT5; KNAT4; KNAT3	Not Available	53.48%
Matrix_471	KAN4	Not Available	53.41%
Matrix_221	SPL7	Not Available	53.40%
Matrix_296	GBF2	Not Available	53.25%
Motif_408	EVENINGAT	Evening element found 46 times in the promoters of 31 cycling genes in Arabidopsis thaliana; Required for circadian control of gene expression; EE (evening element) motif; Also found in the promoter of the Solanum melongena gene encoding cysteine protease, and identified as cis-element for its circadian regulation;Orchestrated transcription of key pathways in Arabidopsis by the circadian clock	53.15%
Matrix_129	ABF1	Not Available	52.99%
Matrix_258	WOX13	Not Available	52.97%
Matrix_463	HAT3.1	Not Available	52.89%
Matrix_389	ILR3	Not Available	52.85%
Matrix_126	RBE	Not Available	52.84%
Matrix_285	DDF1	Not Available	52.80%
Matrix_171	LBD3; LBD4	Not Available	52.78%
Matrix_515	ddf2; ATCBF3; CBF1; CBF4	Not Available	52.74%
Matrix_424	MYB59	Not Available	52.72%
Matrix_120	BEE2	Not Available	52.71%
Matrix_408	GATA12	Not Available	52.68%
Matrix_237	MYB55	Not Available	52.68%
Motif_231	EIN3	Ethylene signaling in Arabidopsis involves feedback regulation via the elaborate control of EBF2 expression by EIN3	52.60%
Matrix_340	HSFC1	Not Available	52.56%
Motif_131	P1BS	PHR1-binding sequence found in the upstream regions of phosphate starvation responsive genes from several plant species; phr1 (phosphate starvation response 1) gene codes for PHR1 protein related to PSR1 gene in C. reinhardtii	52.54%
Matrix_392	ARR2	Not Available	52.44%
Matrix_335	HSFB2A	Not Available	52.38%
Matrix_317	AT1G06070; AT2G31370; AT2G40620	Not Available	52.34%
Matrix_101	ERF5	Not Available	52.31%
Matrix_300	bZIP68; bZIP16	Not Available	52.31%
Matrix_175	Dof5.7	Not Available	52.31%
Matrix_203	GATA9; GATA12	Not Available	52.25%
Motif_575	TATABOX3	TATA box; TATA box found in the 5'upstream region of sweet potato sporamin A gene	52.18%
Motif_195	TATABOX4	TATA box; TATA box found in the 5'upstream region of sweet potato sporamin A gene; TATA box found in beta-phaseolin promoter; sequence and spacing of TATA box elements are critical for accurate initiation	52.18%
Matrix_89	SOC1	Genome-wide identification of SOC1 and SVP targets during the floral transition in Arabidopsis	52.15%
Motif_579	WRECSAA01	Wound-responsive element (WRE) found in the promoter region of cucumber ascorbate oxidase gene, CsAAO1; Binding site of proteins in tobacco nuclear extracts	52.07%
Motif_533	Bellringer/replumless/pennywise BS3 IN AG	Repression of AGAMOUS by BELLRINGER in Floral and Inflorescence Meristems	51.81%
Matrix_195	GATA2; GATA4	Not Available	51.76%
Motif_631	MARARS	ARS element; Motif found in SAR (MAR)	51.76%
Motif_298	GMHDLGMVSPB	Binding site of the soybean homeodomein leucine zipper proteins (GmHdl56, GmHdl57); Found in the phosphate response domain of the soybean VspB promoter; Located between -536 and -527; VspB encodes vacuolar glycoprotein acid phosphatase that serve as vegetative storage protein	51.63%
Matrix_425	TIFY2A	Not Available	51.51%
Matrix_273	ANAC55	Not Available	51.49%
Matrix_163	AT2G20110	Not Available	51.38%
Matrix_452	MYB46	Not Available	51.32%
Motif_489	SORLREP3AT	one of Sequences Over-Represented in Light-Repressed Promoters (SORLREPs) in Arabidopsis; Computationally identified phyA-repressed motifs; See also all SORLREPs and also all SORLIPs;Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data	51.32%
Matrix_513	SOL1; TSO1; TCX2	Not Available	51.28%
Matrix_96	TMO6	Not Available	51.26%
Matrix_465	MYC4	Not Available	51.24%
Matrix_213	ATHB22	Not Available	51.22%
Matrix_23	ANAC46	Not Available	51.14%
Matrix_420	ANAC58	Not Available	50.92%
Matrix_504	WRKY40	Not Available	50.90%
Motif_87	AGL22; AGL20; AGL24	Regulation of floral patterning by flowering time genes	50.78%
Matrix_198	STZ; C2H2; AZF3	Not Available	50.69%
Matrix_293	WRKY38	Not Available	50.60%
Matrix_404	OBP4	Not Available	50.48%
Matrix_366	ARR14	Not Available	50.48%
Matrix_239	AT5G04390	Not Available	50.46%
Matrix_330	MYC2; TT8	Not Available	50.39%
Matrix_470	WRKY18	Not Available	50.38%
Matrix_56	BZIP17; BZIP28; BZIP49	Not Available	50.33%
Matrix_347	WOX14; WOX10	Not Available	50.24%
Matrix_329	WRKY12	Not Available	50.17%
Matrix_287	ERF2	Not Available	50.14%
Matrix_397	GT2L	Not Available	50.07%
Matrix_116	ANAC55	Not Available	50.06%
Motif_18	5659BOXLELAT5659	56/59 box; A sequence motif shared between the tomato LAT(Late Anther Tomato)56 and LAT59 promoters; Found in -103 to -94 in LAT56 and in -114 to -105 in LAT59; Involved in modulating the activity of the LAT gene promoters in pollen	50.00%