PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_438
Name: AtbZIP63
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_369	AT2G18300	Not Available	80.13%
Matrix_399	TGA1	Not Available	74.78%
Matrix_264	ATAREB1	Not Available	74.77%
Matrix_158	AT1G03040; LRL1; UNE12; LRL2; LRL3	Not Available	73.68%
Matrix_323	BIM3	Not Available	73.02%
Matrix_456	bZIP60	Not Available	72.95%
Matrix_467	RAV1	Not Available	72.82%
Matrix_477	RAV1	Not Available	72.82%
Matrix_34	RAV1_2	RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants	72.82%
Matrix_120	BEE2	Not Available	72.40%
Matrix_200	PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815	Not Available	71.95%
Matrix_449	BIM2	Not Available	71.73%
Matrix_330	MYC2; TT8	Not Available	70.95%
Matrix_113	ABI5	Not Available	70.91%
Matrix_465	MYC4	Not Available	70.55%
Matrix_186	FHY3	Not Available	70.31%
Matrix_55	PIF3	Not Available	69.95%
Matrix_389	ILR3	Not Available	69.74%
Matrix_457	TGA2	Not Available	69.72%
Matrix_56	BZIP17; BZIP28; BZIP49	Not Available	69.30%
Matrix_129	ABF1	Not Available	68.45%
Matrix_104	PI	Not Available	68.38%
Matrix_77	PRR5	Not Available	68.25%
Matrix_419	TGA9; PAN; TGA6; bZIP65	Not Available	67.58%
Matrix_3	WRKY48	Not Available	67.58%
Matrix_352	LEC2	Not Available	67.43%
Matrix_247	PIF3	Not Available	67.25%
Matrix_403	BZR1	Not Available	67.18%
Matrix_263	WRKY33; WRKY19; WRKY32	Not Available	67.14%
Matrix_108	PIF4	Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses	66.93%
Matrix_420	ANAC58	Not Available	66.86%
Matrix_176	MYB98	Not Available	66.83%
Matrix_183	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	66.27%
Matrix_128	TGA2	Not Available	66.26%
Matrix_166	TGA4	Not Available	66.26%
Matrix_75	WRKY29	Not Available	66.22%
Matrix_311	TGA1	Not Available	65.86%
Matrix_217	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	65.81%
Matrix_370	WRKY50; WRKY51	Not Available	65.57%
Matrix_278	AtbZIP44	Not Available	65.36%
Matrix_333	GATA3	Not Available	65.35%
Matrix_116	ANAC55	Not Available	65.32%
Matrix_174	ZAT2	Not Available	65.31%
Matrix_192	FHY3/FAR1	Not Available	65.10%
Matrix_17	WRKY22	Not Available	64.63%
Matrix_432	AT1G77920	Not Available	64.57%
Matrix_70	GATA26	Not Available	64.56%
Matrix_446	LBD16	Not Available	64.51%
Matrix_53	MYC3	Not Available	64.40%
Matrix_332	SPT; ALC	Not Available	64.19%
Matrix_384	ATWRKY17	Not Available	64.17%
Matrix_349	CDC5	Not Available	64.08%
Matrix_187	CDC5	Not Available	64.08%
Matrix_207	WRKY10; WRKY57; AT2G44745; ATWRKY13; WRKY49	Not Available	63.99%
Motif_516	BZIP12; ABI5	The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesis	63.55%
Motif_95	UPRE2AT	XBP1 binding site-like sequence found in the plant UPRE (unfolded protein response element) in Arabidopsis thaliana;Either of ERSEII or XBP1 binding sites is essential and sufficient for the UPR	63.44%
Motif_92	ABREATRD22	ABRE (ABA responsive element) in Arabidopsis dehydration-responsive gene rd22	63.21%
Matrix_443	AGL15	Not Available	63.12%
Matrix_415	WRKY27	Not Available	63.06%
Matrix_220	WRKY18	Not Available	63.05%
Matrix_102	WRKY21	Not Available	62.99%
Matrix_141	AT3G25990	Not Available	62.99%
Matrix_472	ZN_C2_H2	Not Available	62.87%
Matrix_265	NGA3	Not Available	62.73%
Matrix_193	RAV1	Not Available	62.73%
Motif_162	ABRE3HVA22	ABRE3 of barley HVA22 gene; G-box; component of ABA response complex in HVA22 gene; ABA response complex 1(ABRC1)=A3(previously designated ABRE3)+CE1	62.71%
Matrix_273	ANAC55	Not Available	62.65%
Matrix_23	ANAC46	Not Available	62.50%
Matrix_452	MYB46	Not Available	62.45%
Motif_202	OPAQUE2ZM22Z	Opaque-2 (O2) target sequence in maize 22- and 27-kD zein promoters; ACGT motif; Related to seed expression; O2 target sequence; Gene: maize 22-kD zein; transacting factor: 02	62.44%
Matrix_153	AP2	Not Available	62.16%
Matrix_143	GATA14; GATA6; GATA5	Not Available	62.04%
Matrix_169	E2F1	Not Available	61.98%
Matrix_406	ATERF-7	Not Available	61.91%
Motif_237	O2F1BE2S1	opaque-2 recognition site F1 in Bertholletia excelsa (Brazil nut tree) 2S storage protein gene (be2S1); O2 protein binds to F1, F2 and F3 sequences of be2S1 promoter; F1 is hybrid C/G box	61.85%
Matrix_359	FLC	Not Available	61.60%
Motif_56	O2F3BE2S1	opaque-2 recognition site F3 in Bertholletia excelsa (Brazil nut tree) 2S storage protein gene (be2S1); O2 protein binds to F1, F2 and F3 sequences of be2S1 promoter; F3 is hybrid of A/G box	61.54%
Matrix_14	ZCW32; AT5G62610	Not Available	61.52%
Matrix_300	bZIP68; bZIP16	Not Available	61.51%
Matrix_296	GBF2	Not Available	61.50%
Matrix_480	BES1	Not Available	61.48%
Matrix_122	ABF1; AREB2	Not Available	61.47%
Matrix_1	TOE2	Not Available	61.33%
Matrix_422	TOE1	Not Available	61.20%
Matrix_197	NAP	Not Available	61.11%
Matrix_171	LBD3; LBD4	Not Available	61.03%
Matrix_282	bZIP60	Not Available	60.99%
Matrix_339	bHLH104	Not Available	60.98%
Matrix_515	ddf2; ATCBF3; CBF1; CBF4	Not Available	60.96%
Matrix_373	E2FE	Not Available	60.88%
Matrix_214	AP1	Not Available	60.72%
Motif_112	GBOX10NT	One of 11 G-box sequences in tobacco; Required for high-level constitutive expression in seed, leaf, root, axillary bud, almost all parts of flower buds and pollen	60.67%
Motif_300	ACGTROOT1; HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression. ACGT motif related to root expression; Gene: synthetic; perfect palindromic sequence (PA) containing G-box-related sequence; transacting factor: TAF-1; Binding of SGBF-1 (a Soybean G-box binding bZIP transcription factor) to ABRE is enhanced by SCOF-1 (a zinc finger protein ); Transcription of SCOF-1 is induced by low temperature and ABA	60.56%
Motif_406	ABREBZMRAB28	ABA-responsive element (ABRE B) found at -105 to -96 in maize rab28; Maize rab28 is ABA-inducible in embryos and vegetative tissues	60.55%
Matrix_328	AT1G76580	Not Available	60.30%
Matrix_462	ATERF-8	Not Available	60.17%
Matrix_202	WRKY71; WRKY28; WRKY8	Not Available	60.10%
Matrix_511	AT1G05805; AT1G35460; AT1G51140; AT2G42280; AT2G43140; AT4G09180	Not Available	60.03%
Motif_388	CPRFPCCHS; AtbZIP1	BoxII; Binding site of CPRF-1, -2, -3 and -4(Common Plant Regulatory Factor) in the parsley light responsive chalcone synthase (CHS) gene promoter; CPRF proteins are bZIP class transcription factors; CPRF proteins participates in the light-mediated activation of the CHS gene in parsley; ACE; The proline-rich domains of CPRF1 and 4 activate transcription; CPRF1-containing bZIP heterodimer interacts with ACE in vivo; ACE; Binding site of parsley bZIP factors CPRF1 and 4; Found in the parsley light responsive chalcone synthase (CHS) gene promoter; The proline-rich domains of CPRF1 and 4 activate transcription; CPRF1-containing bZIP heterodimer interacts with ACE in vivo; The arabidopsis bZIP1 transcription factor is involved in sugar signaling, protein networking, and DNA binding	59.98%
Motif_252	GBOXPC	G box; Binding site of parsley cytosolic G-box binding factors (cytosolic GBFs); Cytosolic G-Box binding activity is modulated by light; DNA binding activity of cytosolic GBFs is regulated by cytosolic phosphorylation/dephospholylation activities; Cytosolic GBFs are translocated to the nucleus in a light-regulated manner	59.98%
Motif_599	LREBOXIIPCCHS1; HY5	BoxII; Light responsive element (LRE) found in the parsley CHS-1 (chalcone synthase-1) gene promoter; Required for light responsiveness; nuclear protein binding site; Highly conserved in various light inducible gene promoters; Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	59.98%
Motif_665	ACEATCHS	ACEAtCHS (ACGT containing element) found in the LRU (light-responsive unit) in Arabidopsis chalcone synthase (CHS) gene promoter; Required for UV-B and UV-1/blue light responsiveness; Transcriptional repression by AtMYB4 controls production of UV-protecting sun screens in Arabidopsis; AtMYB4 mutant shows enhanced levels of sinapate ester in leaves and tolerance of UV-B irradiation; AtMYB4 expression is downregulated by exposure to UV-B light; Identification of UV/blue light-response elements in the Arabidopsis thaliana chalcone synthase promoter using a homologous protoplast transient expression system	59.88%
Matrix_470	WRKY18	Not Available	59.85%
Matrix_228	TGA2	Not Available	59.82%
Matrix_151	ASIL1	Not Available	59.61%
Matrix_305	PIF4	Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses	59.55%
Motif_400	ABREAZMRAB28	ABA-responsive element (ABRE A) found at -148 to -139 in maize rab28; Maize rab28 is ABA-inducible in embryos and vegetative tissues	59.45%
Matrix_101	ERF5	Not Available	59.45%
Matrix_489	RAV1	Not Available	59.39%
Matrix_154	AT1G22190; AT1G36060; AT1G64380; RAP2.4; AT2G20880; AT2G22200; AT4G13620; AT4G28140; AT4G39780; AT5G65130	Not Available	59.32%
Matrix_395	AT1G19210; ORA47; AT4G31060; AT5G21960	Not Available	59.31%
Matrix_37	GATA27	Not Available	59.22%
Matrix_66	AtLEC2	Genes directly regulated by LEAFY COTYLEDON2 provide insight into the control of embryo maturation and somatic embryogenesis	59.21%
Matrix_256	IXR11; KNAT5; KNAT4; KNAT3	Not Available	59.07%
Matrix_514	DYT1	Regulation of the Arabidopsis anther transcriptome by DYT1 for pollen development	59.06%
Matrix_440	LFY	Not Available	59.05%
Matrix_260	CAMTA3	Not Available	59.01%
Matrix_12	EIN3; EIL2	Not Available	59.00%
Matrix_20	ANAC030; NST1; NAC066	Not Available	59.00%
Matrix_268	EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105	Not Available	58.95%
Matrix_57	WIN1; SHN3; SHN2	Not Available	58.91%
Matrix_380	ATMYR1	Not Available	58.88%
Motif_571	GBOXSORBCS1	G-box found in the spinach RBCS-1 gene promoter; Located between -219 and -212; G-box trimer confers relatively high level expression in roots	58.87%
Matrix_203	GATA9; GATA12	Not Available	58.87%
Matrix_150	UNE10; PIF7	Not Available	58.87%
Matrix_377	AT1G75490; DREB2C; AT2G40350; AT5G18450	Not Available	58.83%
Matrix_454	AT1G77200; ATERF38; AT4G16750; AT5G52020	Not Available	58.81%
Matrix_259	AT1G50680; AT1G51120	Not Available	58.74%
Motif_197	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	58.74%
Motif_498	SGBFGMGMAUX28	bZIP proteins SGBF-1 and SGBF-2 binding site in soybean GmAux28 gene promoter	58.74%
Matrix_33	SPL11; SPL10; SPL2	Not Available	58.67%
Matrix_280	TCP24; TCP1; BRC2; ATTCP18	Not Available	58.65%
Matrix_298	RAV1	Not Available	58.58%
Matrix_413	RAV1	Not Available	58.58%
Matrix_431	ATHB21; HB-3	Not Available	58.52%
Matrix_418	KNAT6; KNAT2	Not Available	58.49%
Matrix_409	DEAR3	Not Available	58.42%
Matrix_175	Dof5.7	Not Available	58.34%
Matrix_499	ARR18	Not Available	58.31%
Matrix_322	NST3; ANAC015; BRN2	Not Available	58.28%
Matrix_59	AT4G00238; AT4G00250	Not Available	58.18%
Matrix_285	DDF1	Not Available	58.15%
Matrix_139	OBF5	Not Available	58.05%
Motif_67	LS5ATPR1	LS5; A negative regulatory element found in the Arabidopsis PR-1 gene promoter; Binding site of TGA2; NPR1 increased the binding of TGA2 to the element; NPR1 is essential in activating systemic, inducible plant defense response; TGA6 expressed in roots in young seedlings; TGA2.1 is a direct transcriptional activator; TGA2.2 stabilizes TGA2.1 binding; The Arabidopsis NPR1/NIM1 protein enhances the DNA binding activity of a subgroup of the TGA family of bZIP transcription factors	58.04%
Matrix_397	GT2L	Not Available	58.02%
Motif_232	ABADESI1	Responsive to ABA and desiccation; Motif I of rice rab16A-D (initially called rab-21); Expressed in seeds late during embryogenesis; Induced by ABA and osmotic stress in vegetative tissues; Contains ACGT motif; transacting factor: TAF-1	57.81%
Motif_200	GBOXLERBCS	G box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; Binding with GBF	57.65%
Matrix_226	GATA1	Not Available	57.61%
Matrix_92	AT1G33760	Not Available	57.58%
Matrix_365	AT1G10120; AT1G25330; CIB5; AT1G68920; AT3G23690; CIB1	Not Available	57.56%
Matrix_326	AT5G07310; Rap2.6L; AT5G61890	Not Available	57.49%
Matrix_60	AT1G01260; AT5G57150	Not Available	57.49%
Matrix_22	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	57.43%
Motif_542	ABI5; AtMYC2; HY5	A basic helix-loop-helix transcription factor in Arabidopsis, MYC2, acts as a repressor of blue light-mediated photomorphogenic growth. Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression. The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesis	57.42%
Matrix_505	GATA8	Not Available	57.40%
Matrix_312	ARF11; MP; ARF6; IAA21; ARF8; ARF4	Not Available	57.36%
Matrix_233	MYC3	Not Available	57.22%
Matrix_287	ERF2	Not Available	57.11%
Matrix_343	AT2G33710	Not Available	56.99%
Matrix_188	SPL4	Not Available	56.98%
Matrix_320	MYC4	Not Available	56.92%
Matrix_50	ATERF14; AT5G43410	Not Available	56.91%
Matrix_355	ERF10; ERF11	Not Available	56.86%
Matrix_91	CRF3	Not Available	56.84%
Matrix_331	GBF1	Not Available	56.70%
Motif_399	UPRMOTIFIAT	Motif I in the conserved UPR (unfolded protein response) cis-acting element in Arabidopsis genes coding for SAR1B, HSP-90, SBR-like, Ca-ATPase 4, CNX1, PDI, etc.	56.58%
Matrix_109	GBF3	Not Available	56.47%
Matrix_493	AT1G22985; AT1G71130	Not Available	56.42%
Matrix_180	SPL1	Not Available	56.40%
Matrix_201	AT1G74840	Not Available	56.38%
Matrix_181	Dof5.7	Not Available	56.18%
Motif_480	ABRE2HVA1	ABA responsive element, ABRE2, found in barley HVA1 gene encoding a class 3 late embryogenesis-abundant protein; stress response	55.98%
Motif_362	TGA2 octamer	palindromic octamer found enriched in chip-chip regions for TGA2	55.79%
Matrix_7	PIF4	Not Available	55.77%
Matrix_134	ABF1	Not Available	55.71%
Matrix_451	STY1	Not Available	55.62%
Matrix_393	REM1	Not Available	55.59%
Matrix_402	TOE1	Not Available	55.56%
Matrix_437	MYC2	Not Available	55.55%
Matrix_284	KAN2; KAN3; KAN; KAN4	Not Available	55.45%
Matrix_161	MYBC1; AT3G10760; LUX; AT5G05090; AT5G59570	Not Available	55.38%
Matrix_221	SPL7	Not Available	55.36%
Matrix_410	TOE2	Not Available	55.27%
Matrix_286	GATA7	Not Available	55.23%
Motif_528	ABI5	The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesis	55.21%
Matrix_148	WRKY60	Not Available	55.17%
Matrix_257	NAC050; ANAC051; anac057; NAC2	Not Available	55.04%
Motif_107	O2F2BE2S1	opaque-2 recognition site F2 in Bertholletia excelsa (Brazil nut tree) 2S storage protein gene (be2S1); O2 protein binds to F1, F2 and F3 sequences of be2S1 promoter; F2 is a new O2-binding sequence related to the O2 target sites of the Coix alpha-coxin, the maize b-32 genes and the AP-1 pseudopalindrome	54.97%
Motif_2	ACGTSEED2	ACGT motif related to seed expression; Gene: French bean phaseolin; transacting factor: 02	54.97%
Motif_680	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	54.97%
Matrix_156	POC1	Not Available	54.94%
Motif_534	GBOXRELOSAMY3	G box-related element found in Amy3D (amylase) promoter of rice; Similar to ABRE	54.84%
Motif_418	ABRE2HVA22	ABRE2 of barley HVA22 gene; G-box; component of ABA response complex in HVA22 gene; see ABRE3 of HVA22 gene; see CE1 (coupling element 1 = TGCCACCGG)	54.83%
Motif_57	ABREOSRAB21	ABA responsive element (ABRE) of wheat Em and rice rab21 genes; Proposed consensus sequence for the repeated motif (Em1a and Em1b) of wheat Em gene	54.82%
Matrix_308	INO	Not Available	54.77%
Matrix_196	TCP20; AT5G41030	Not Available	54.62%
Matrix_195	GATA2; GATA4	Not Available	54.60%
Matrix_476	bHLH115; bHLH34	Not Available	54.58%
Matrix_481	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	54.57%
Matrix_363	RAP2.3	Not Available	54.55%
Motif_244	ABRE-like binding site motif	Not Available	54.51%
Matrix_145	GBF4; AT5G44080	Not Available	54.49%
Matrix_261	ATERF-1	Not Available	54.48%
Motif_374	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	54.38%
Matrix_367	REM1	Not Available	54.32%
Matrix_423	AT3G04030	Not Available	54.28%
Motif_4	NAP	An abscisic acid-AtNAP transcription factor-SAG113 protein phosphatase 2C regulatory chain for controlling dehydration in senescing Arabidopsis leaves	54.27%
Motif_53	ABREA2HVA1	A2 of ABRC3; ABRC3 (ABA response complex 3) of HVA1 consists of CE3 and A2; ABA responsive element; stress response; Found in barley HVA1 gene encoding a class 3 late embryogenesis-abundant (Lea) protein; ABRC1 OF HVA22 consists of CE1 and A3	54.19%
Matrix_408	GATA12	Not Available	54.13%
Matrix_25	AP3	Not Available	54.11%
Matrix_204	WOX13	Not Available	54.06%
Matrix_444	AT1G19485; AT4G17950	Not Available	54.04%
Matrix_448	ATERF6	Not Available	54.03%
Matrix_271	AT3G16350	Not Available	53.96%
Matrix_80	BIM1	Not Available	53.95%
Matrix_504	WRKY40	Not Available	53.93%
Matrix_224	ERF1	Not Available	53.91%
Matrix_306	TGA1	TGA1 and G-box binding factors: two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGG	53.86%
Matrix_374	AT5G07580; AT5G61590	Not Available	53.80%
Motif_128	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	53.80%
Matrix_357	WRKY61; WRKY6; WRKY9; WRKY36; WRKY47; WRKY42; WRKY31; WRKY72	Not Available	53.54%
Motif_617	ABRE3HVA1	ABA responsive element, ABRE3, found in barley HVA1 gene encoding a class 3 late embryogenesis-abundant protein; stress response	53.53%
Matrix_502	AT3G13040	Not Available	53.49%
Matrix_362	DEAR3	Not Available	53.48%
Motif_154	ABREBNNAPA	ABRE of napA storage-protein gene of Brassica napus; ABA responsive element; dist B ABRE mediated transactivation by ABI3 adn ABI3-dependent response to ABA; a tetramer of the composite RY/G complex mediated only ABA-independent transactivation by ABI3; B2 domain of ABI3 is necessary for ABA-independent and ABA-dependent activation through the dist B ABRE; B3 domain of ABI3 interacts with the RY/G complex	53.48%
Matrix_227	AT1G64620	Not Available	53.45%
Matrix_26	ATMYB3; MYB24	Not Available	53.40%
Matrix_244	DREB2C	Not Available	53.39%
Matrix_61	ATCBF3	Not Available	53.35%
Motif_82	ACGTSEED3	ACGT motif related to seed expression; Gene: synthetic; wild-type motif (Iwt) containing G-box-related sequence; transacting factor: bZIP; A tobacco bZip transcription activator (TAF-1) binding site	53.32%
Matrix_430	TOE2	Not Available	53.30%
Matrix_483	ICU4	Not Available	53.25%
Motif_71	WRKY63	ABO3, a WRKY transcription factor, mediates plant responses to abscisic acid and drought tolerance in Arabidopsis	53.23%
Motif_535	ACIPVPAL2	ACI element found at -83 to -74 of bean PAL2 promoter; AC-rich element; ACI element is required for vascular-specific gene expression; See also ACIIPVPAL2 and ACIIIPVPAL2; Three AC-elements, which are possible Myb protein binding sites, together with a G-box, interact to direct the complex patterns of tissue-specific expression of pAL2 gene	53.21%
Matrix_447	RVE1	Not Available	53.20%
Matrix_387	ORA47	Not Available	53.19%
Matrix_234	RAP2.3	Not Available	53.18%
Matrix_231	HDG2; HDG3; ATML1; HB-7	Not Available	53.16%
Matrix_479	TOE1	Not Available	53.12%
Matrix_229	CDC5	A cdc5+ homolog of a higher plant, Arabidopsis thaliana	53.08%
Matrix_44	CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2	Not Available	53.07%
Motif_124	ABREMOTIFIIIOSRAB16B	Motif III found in the promoter of rice rab16B gene; Motif I and motif III are both required for ABA responsiveness; However, each can substitute for the other	53.00%
Motif_644	ABREDISTBBNNAPA	dist B (distal portion of B-box) found in napA gene of Brassica napus; Shows similarity to ABRE; Found between -148 and -124; Required for seed specific expression and ABA responsiveness;dist B ABRE mediated transactivation by ABI3 adn ABI3-dependent response to ABA; a tetramer of the composite RY/G complex mediated only ABA-independent transactivation by ABI3; B2 domain of ABI3 is necessary for ABA-independent and ABA-dependent activation through the dist B ABRE	52.98%
Matrix_498	AT2G28710; AT3G46070; AT3G46080; ZAT7	Not Available	52.97%
Motif_265	GCAACREPEATZMZEIN	GCAAC repeat found in the 22bp recognition site for beta-1 factor in the promoter of beta-zein (prolamin type) gene of maize; GCAAC is the core recognition sequence of the protein encoded by the retroviral oncogene myb	52.97%
Matrix_190	ATERF1	Not Available	52.95%
Motif_616	BZIP12; ABI5	The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesis	52.94%
Matrix_316	WRKY15; WRKY39; WRKY7; WRKY74	Not Available	52.91%
Matrix_67	GLK1	Not Available	52.85%
Matrix_83	PRR5	Not Available	52.85%
Matrix_135	ABI3	Not Available	52.84%
Motif_473	ABREOSRGA1	ABRE (ABA responsive element) in rice RGA1 encoding a G protein alpha subunit;ABRE; ABA and water-stress responses; Found in maize rab28; maize rab28 is ABA-inducible in embryos and vegetative tissues; Found in the Arabidopsis (A.t.) alcohol dehydrogenase (Adh) gene promoter; ABRE2; Found in the maize (Z.m.) Cat1 gene promoter; Responsible for the induction by ABA; Binding site of CBF2; Arabidopsis CBF1 overexpression induces COR genes and enhances freezing tolerance; The CBF genes do not appear to be autoregulated through the CRT/DRE sequence;The cis-regulatory element CCACGTGG is involved in ABA and water-stress responses of the maize gene rab28. Characterization of a maize G-box binding factor that is induced by hypoxia	52.83%
Motif_101	MYB61	AtMYB61, an R2R3-MYB transcription factor, functions as a pleiotropic regulator via a small gene network	52.81%
Matrix_211	MYB3	Not Available	52.81%
Matrix_350	ARR14	Not Available	52.80%
Matrix_142	ZFP8	Not Available	52.80%
Motif_314	HY5AT	G box; Binding site of Arabidopsis bZIP protein HY5; HY5 is constitutively nuclear localized and is involved in light regulation of transcriptional activity of the promoters containing the G-box;HY5 abundance peaks in early seedling development, consistent with its role in promoting photomorphogenesis; HY5 stability and activity is regulated by phosphorylation in its COP1 binding domain; HY5 regulates stimulus-induced development of root and hypocotyl	52.74%
Matrix_394	DREB_U	Not Available	52.63%
Matrix_500	WRKY43	Not Available	52.57%
Matrix_213	ATHB22	Not Available	52.50%
Matrix_463	HAT3.1	Not Available	52.50%
Matrix_230	ARR11	Not Available	52.50%
Matrix_321	HRD	Not Available	52.49%
Matrix_90	BEE1; BEE3; AT3G07340; AT5G48560; AT5G50915	Not Available	52.45%
Matrix_236	CCA1	Not Available	52.41%
Matrix_97	APRR2	Not Available	52.35%
Motif_74	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	52.35%
Matrix_69	AT2G03500	Not Available	52.32%
Matrix_277	RAP2.6	Not Available	52.32%
Matrix_508	APL; AT3G12730; AT3G24120; UNE16	Not Available	52.30%
Matrix_450	SPL7	Not Available	52.26%
Matrix_416	ASL5	Not Available	52.21%
Matrix_38	SPL14	Not Available	52.20%
Matrix_293	WRKY38	Not Available	52.08%
Motif_281	ABRE3OSRAB16	ABA-responsive element of rice rab16 and alpha-amylase genes	52.04%
Matrix_64	PIF5	Not Available	51.98%
Matrix_288	RAP2.3	Not Available	51.95%
Matrix_10	STY1	Not Available	51.93%
Matrix_307	RGL2; RGL3	Not Available	51.93%
Motif_465	AtMYB44	Two novel MYB homologues with changed expression in late embryogenesis-defective Arabidopsis mutants	51.85%
Matrix_84	AtGRF6	Not Available	51.82%
Matrix_162	AtPHR1	Not Available	51.79%
Matrix_433	ATERF1	Not Available	51.73%
Matrix_212	ATHB-12	Not Available	51.73%
Matrix_249	WRKY11	Not Available	51.66%
Motif_573	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	51.64%
Matrix_119	RRTF1	Not Available	51.64%
Matrix_155	RAP2.6; ERF110; ABR1	Not Available	51.59%
Matrix_385	DEAR4	Not Available	51.52%
Matrix_329	WRKY12	Not Available	51.51%
Matrix_396	AP3	Not Available	51.48%
Matrix_173	ZAP1	Not Available	51.45%
Matrix_314	WRKY65; WRKY14; WRKY35; WRKY69; WRKY16; ATWRKY52	Not Available	51.41%
Matrix_439	AP3	Not Available	51.40%
Matrix_317	AT1G06070; AT2G31370; AT2G40620	Not Available	51.40%
Motif_291	ABFs binding site motif	Binding site of trans-acting factor EMBP-1; wheat Em gene;Binding site of ABFs; ABFs (ABRE binding factors) were isolated from Arabidopsis by a yeast one-hybrid screening system; Expression ABFs is induced by ABA and various stress treatment; ABFs belongs to a distinct subfamily of bZIP proteins; Involved in ABA-mediated stress-signaling pathway;A plant leucine zipper protein that recognizes an abscisic acid response element	51.37%
Motif_295	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	51.27%
Motif_290	CCTCGTGTCTCGMGH3	Sequence found in D1 element in Soybean GH3 gene promoter; Showed constitutive activity with TGTCTC element; Confers auxin inducibility; Binding site of nuclear protein	51.24%
Matrix_36	RAV1_1	RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants	51.24%
Matrix_9	AT5G04760	Not Available	51.20%
Motif_275	AtbZIP1	The arabidopsis bZIP1 transcription factor is involved in sugar signaling, protein networking, and DNA binding	51.06%
Matrix_4	ARR14	Not Available	51.01%
Matrix_136	SEP3	Not Available	50.99%
Matrix_219	AGL15	Not Available	50.94%
Matrix_495	HD-GL2-1; ANL2	Not Available	50.94%
Matrix_491	AT1G68670; AT3G25790	Not Available	50.92%
Matrix_206	CUC1; ANAC100	Not Available	50.91%
Matrix_29	AP1	Not Available	50.88%
Matrix_210	ARR1	Not Available	50.77%
Matrix_172	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	50.76%
Matrix_111	ABF3	Not Available	50.76%
Matrix_199	AT1G69170; SPL9; SPL15; SPL13A; SPL13B	Not Available	50.72%
Matrix_110	ATABI4; AT3G57600	Not Available	50.72%
Matrix_79	FUS3	Not Available	50.69%
Motif_500	D1GMAUX28	D1; DNase I protected sequence found in the soybean auxin responsive gene, Aux28, promoter; D1 and D4 share a very similar core sequence TAGTXXCTGT and TAGTXCTGT, respectively; D1/D4-like sequence were identified in several other auxin-responsive genes; Binding site of GmGT-2 which is the GT-2 family of transcription factors; GmGT-2 are down-regulated by light in a phytochrome-dependent manner	50.61%
Matrix_392	ARR2	Not Available	50.55%
Matrix_52	ZAT18	Not Available	50.52%
Matrix_46	AT4G21895	Not Available	50.45%
Matrix_334	AT3G23230	Not Available	50.40%
Matrix_421	GLK1	Not Available	50.40%
Matrix_475	AT5G64220	Not Available	50.39%
Motif_638	ABRE binding site motif	Not Available	50.36%
Matrix_473	RRTF1	Not Available	50.34%
Matrix_434	ARR11	Not Available	50.33%
Matrix_492	ETT	Not Available	50.31%
Motif_211	ABREMOTIFIOSRAB16B	Motif I found in the promoter of rice rab16B gene; Motif I and motif III are both required for ABA responsiveness; However, each can substitute for the other	50.28%
Matrix_378	ATERF1	Not Available	50.22%
Motif_19	AAGACGTAGATACL12	Sequence found in Arabidopsis acyl carrier protein (ACP), Acl1.2, gene promoter; Contains bZIP core motif (ACGT)	50.22%
Matrix_87	AT1G19000	Not Available	50.20%
Matrix_453	EIL3	Not Available	50.10%
Matrix_45	DRN	Not Available	50.09%
Matrix_138	RRTF1	Not Available	50.08%
Matrix_146	ORA47	Not Available	50.07%
Matrix_484	ATERF13	Not Available	50.04%