PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_425
Name: TIFY2A
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_100	AT1G48610	Not Available	70.10%
Matrix_126	RBE	Not Available	69.01%
Matrix_35	YAB5; YAB3	Not Available	68.98%
Matrix_198	STZ; C2H2; AZF3	Not Available	68.87%
Matrix_503	AT2G37430; AT3G53600	Not Available	68.46%
Matrix_218	TIFY2B; TIFY1	Not Available	67.46%
Matrix_379	RHL41	Not Available	67.44%
Matrix_239	AT5G04390	Not Available	67.35%
Matrix_164	AT1G02030; AT2G45120; AZF2; AT3G60580	Not Available	66.95%
Matrix_112	TBP2; TFIID-1	Not Available	66.86%
Matrix_436	AT3G49930; AZF1	Not Available	66.39%
Matrix_512	HAT3	Not Available	65.76%
Matrix_519	ATDOF2.4	Not Available	65.37%
Matrix_96	TMO6	Not Available	64.47%
Matrix_241	HB-1; AT5G44180	Not Available	64.25%
Matrix_279	HRS1	Not Available	64.19%
Matrix_283	GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC	Not Available	63.90%
Motif_309	GATA promoter motif	Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics	63.76%
Matrix_505	GATA8	Not Available	62.92%
Matrix_37	GATA27	Not Available	61.86%
Matrix_27	ATAIB; ATNIG1	Not Available	60.91%
Matrix_347	WOX14; WOX10	Not Available	60.82%
Matrix_274	EDF3	Not Available	60.82%
Matrix_76	GATA10	Not Available	59.78%
Motif_401	ARR1AT	ARR1-binding element found in Arabidopsis; ARR1 is a response regulator; AGATT is found in the promoter of rice non-symbiotic haemoglobin-2 (NSHB) gene	59.68%
Matrix_84	AtGRF6	Not Available	59.63%
Motif_221	MYBCORE	Binding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesis	59.28%
Matrix_423	AT3G04030	Not Available	59.00%
Matrix_248	ZFP5	Not Available	58.64%
Matrix_243	RAP2.12; RAP2.2	Not Available	58.52%
Matrix_522	GATA11; GATA13	Not Available	58.25%
Matrix_303	ATWOX13	Not Available	58.02%
Matrix_65	POC1; PIL1	Not Available	57.73%
Motif_336	MYBMOUSE	Binding site for mouse c-myb protein	57.37%
Matrix_78	AT3G45610	Not Available	57.34%
Motif_584	UPRE-III(bZIP60)	The plant-specific transcription factor NAC103 is induced by bZIP60 through a new cis-regulatory element to modulate the unfolded protein response in Arabidopsis	57.03%
Matrix_63	ARR10	Not Available	56.72%
Matrix_177	ADOF2	Not Available	55.85%
Motif_210	REBETALGLHCB21	REbeta found in Lemna gibba Lhcb21 gene promoter; Located at -114 to -109; A GATA sequence created at a position six nucleotides upstream could replace the function of REbeta; Required for phytochrome regulation	55.06%
Matrix_411	DOF5.6	Not Available	53.74%
Motif_131	P1BS	PHR1-binding sequence found in the upstream regions of phosphate starvation responsive genes from several plant species; phr1 (phosphate starvation response 1) gene codes for PHR1 protein related to PSR1 gene in C. reinhardtii	53.37%
Matrix_157	LHY; RVE2	Not Available	52.78%
Motif_503	EECCRCAH1	EEC; Consensus motif of the two enhancer elements, EE-1 and EE-2, both found in the promoter region of the Chlamydomonas Cah1 (encoding a periplasmic carbonic anhydrase); Binding site of Myb transcription factor LCR1	52.73%
Matrix_336	AT5G08520	Not Available	52.67%
Matrix_182	ATHB6	Not Available	52.55%
Matrix_165	KNAT1	Not Available	52.51%
Motif_630	WBOXNTCHN48	W box identified in the region between -125 and -69 of a tobacco class I basic chitinase gene CHN48; NtWRKY1, NtWRKY2 and NtWRKY4 bound to W box; NtWRKYs possibly involved in elicitor-respsonsive transcription of defense genes in tobacco	51.57%
Motif_195	TATABOX4	TATA box; TATA box found in the 5'upstream region of sweet potato sporamin A gene; TATA box found in beta-phaseolin promoter; sequence and spacing of TATA box elements are critical for accurate initiation	51.46%
Motif_517	LEAFYATAG	Target sequence of LEAFY in the intron of AGAMOUS gene in Arabidopsis	51.38%
Motif_495	TRANSINITMONOCOTS	Context sequence of translational initiation codon in monocots	51.31%
Motif_190	WUSATAg	Target sequence of WUS in the intron of AGAMOUS gene in Arabidopsis	51.26%
Motif_324	MYBST1	Core motif of MybSt1 (a potato MYB homolog) binding site; MybSt1 cDNA clone was isolated by using CaMV 35S promoter domain A as a probe; The Myb motif of the MybSt1 protein is distinct from the plant Myb DNA binding domain described so far	50.82%
Matrix_197	NAP	Not Available	50.68%
Matrix_334	AT3G23230	Not Available	50.45%
Matrix_504	WRKY40	Not Available	50.25%
Matrix_415	WRKY27	Not Available	50.20%
Matrix_152	EIL1; AT5G65100	Not Available	50.15%
Motif_383	UPRE-III(bZIP60)	The plant-specific transcription factor NAC103 is induced by bZIP60 through a new cis-regulatory element to modulate the unfolded protein response in Arabidopsis	50.04%