PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_413
Name: RAV1
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_298	RAV1	Not Available	100.00%
Matrix_489	RAV1	Not Available	70.08%
Matrix_306	TGA1	TGA1 and G-box binding factors: two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGG	68.46%
Matrix_176	MYB98	Not Available	66.64%
Matrix_257	NAC050; ANAC051; anac057; NAC2	Not Available	65.41%
Matrix_48	PI	Not Available	63.95%
Matrix_153	AP2	Not Available	63.74%
Matrix_268	EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105	Not Available	63.02%
Matrix_29	AP1	Not Available	62.18%
Matrix_83	PRR5	Not Available	61.49%
Matrix_33	SPL11; SPL10; SPL2	Not Available	61.38%
Matrix_440	LFY	Not Available	61.27%
Matrix_151	ASIL1	Not Available	60.44%
Matrix_231	HDG2; HDG3; ATML1; HB-7	Not Available	60.09%
Matrix_183	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	59.95%
Matrix_56	BZIP17; BZIP28; BZIP49	Not Available	59.93%
Matrix_259	AT1G50680; AT1G51120	Not Available	59.88%
Matrix_204	WOX13	Not Available	59.85%
Matrix_53	MYC3	Not Available	59.62%
Matrix_264	ATAREB1	Not Available	59.44%
Matrix_108	PIF4	Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses	59.39%
Matrix_8	KAN1	Not Available	59.37%
Matrix_219	AGL15	Not Available	59.13%
Matrix_352	LEC2	Not Available	59.12%
Matrix_285	DDF1	Not Available	58.77%
Matrix_115	AGL15	Not Available	58.74%
Matrix_311	TGA1	Not Available	58.67%
Matrix_308	INO	Not Available	58.64%
Matrix_438	AtbZIP63	Not Available	58.58%
Matrix_416	ASL5	Not Available	58.53%
Matrix_458	MGP; AT1G14580; AtIDD7; AtIDD5; AtIDD4; AtIDD12; JKD; AT5G66730	Not Available	58.52%
Matrix_322	NST3; ANAC015; BRN2	Not Available	58.40%
Matrix_59	AT4G00238; AT4G00250	Not Available	58.28%
Matrix_213	ATHB22	Not Available	58.21%
Matrix_271	AT3G16350	Not Available	58.20%
Matrix_328	AT1G76580	Not Available	58.08%
Matrix_171	LBD3; LBD4	Not Available	58.07%
Matrix_217	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	58.04%
Matrix_287	ERF2	Not Available	58.02%
Matrix_389	ILR3	Not Available	58.02%
Matrix_113	ABI5	Not Available	57.86%
Matrix_399	TGA1	Not Available	57.86%
Matrix_351	HAT9; ATHB-4; ATHB2; HAT22; HAT14	Not Available	57.79%
Matrix_269	FHY3/FAR1	Not Available	57.76%
Matrix_333	GATA3	Not Available	57.74%
Matrix_226	GATA1	Not Available	57.74%
Matrix_465	MYC4	Not Available	57.71%
Matrix_120	BEE2	Not Available	57.70%
Matrix_330	MYC2; TT8	Not Available	57.68%
Matrix_286	GATA7	Not Available	57.64%
Matrix_101	ERF5	Not Available	57.55%
Matrix_284	KAN2; KAN3; KAN; KAN4	Not Available	57.47%
Matrix_369	AT2G18300	Not Available	57.38%
Matrix_34	RAV1_2	RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants	57.38%
Matrix_467	RAV1	Not Available	57.38%
Matrix_477	RAV1	Not Available	57.38%
Matrix_70	GATA26	Not Available	57.37%
Matrix_283	GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC	Not Available	57.34%
Matrix_200	PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815	Not Available	57.33%
Matrix_227	AT1G64620	Not Available	57.24%
Matrix_87	AT1G19000	Not Available	57.13%
Matrix_75	WRKY29	Not Available	57.11%
Matrix_449	BIM2	Not Available	57.07%
Matrix_158	AT1G03040; LRL1; UNE12; LRL2; LRL3	Not Available	56.99%
Matrix_323	BIM3	Not Available	56.77%
Matrix_12	EIN3; EIL2	Not Available	56.75%
Matrix_143	GATA14; GATA6; GATA5	Not Available	56.69%
Matrix_499	ARR18	Not Available	56.68%
Matrix_141	AT3G25990	Not Available	56.61%
Matrix_166	TGA4	Not Available	56.57%
Matrix_263	WRKY33; WRKY19; WRKY32	Not Available	56.54%
Matrix_439	AP3	Not Available	56.53%
Matrix_481	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	56.49%
Matrix_17	WRKY22	Not Available	56.44%
Matrix_104	PI	Not Available	56.43%
Matrix_274	EDF3	Not Available	56.43%
Matrix_6	AT1G70000	Not Available	56.38%
Matrix_3	WRKY48	Not Available	56.36%
Matrix_206	CUC1; ANAC100	Not Available	56.29%
Matrix_433	ATERF1	Not Available	56.29%
Matrix_106	AT5G47390	Not Available	56.12%
Matrix_128	TGA2	Not Available	56.11%
Matrix_431	ATHB21; HB-3	Not Available	55.80%
Matrix_55	PIF3	Not Available	55.74%
Matrix_212	ATHB-12	Not Available	55.65%
Matrix_367	REM1	Not Available	55.62%
Matrix_370	WRKY50; WRKY51	Not Available	55.58%
Matrix_332	SPT; ALC	Not Available	55.52%
Matrix_195	GATA2; GATA4	Not Available	55.47%
Matrix_302	HAT1; HAT2	Not Available	55.44%
Matrix_444	AT1G19485; AT4G17950	Not Available	55.28%
Matrix_273	ANAC55	Not Available	55.18%
Matrix_472	ZN_C2_H2	Not Available	55.00%
Motif_92	ABREATRD22	ABRE (ABA responsive element) in Arabidopsis dehydration-responsive gene rd22	54.85%
Matrix_448	ATERF6	Not Available	54.83%
Matrix_493	AT1G22985; AT1G71130	Not Available	54.79%
Matrix_418	KNAT6; KNAT2	Not Available	54.79%
Matrix_97	APRR2	Not Available	54.76%
Matrix_14	ZCW32; AT5G62610	Not Available	54.66%
Matrix_122	ABF1; AREB2	Not Available	54.52%
Matrix_246	ARR10	Molecular structure of the GARP family of plant Myb-related DNA binding motifs of the Arabidopsis response regulators	54.48%
Matrix_335	HSFB2A	Not Available	54.46%
Matrix_355	ERF10; ERF11	Not Available	54.44%
Matrix_71	ATHB7	Not Available	54.44%
Matrix_129	ABF1	Not Available	54.38%
Matrix_384	ATWRKY17	Not Available	54.37%
Matrix_343	AT2G33710	Not Available	54.31%
Matrix_491	AT1G68670; AT3G25790	Not Available	54.31%
Matrix_41	anac058	Not Available	54.25%
Matrix_93	YAB5	Not Available	54.17%
Matrix_174	ZAT2	Not Available	54.13%
Matrix_454	AT1G77200; ATERF38; AT4G16750; AT5G52020	Not Available	54.03%
Matrix_469	NAC041; NAC083	Not Available	54.02%
Matrix_9	AT5G04760	Not Available	53.98%
Matrix_326	AT5G07310; Rap2.6L; AT5G61890	Not Available	53.92%
Matrix_44	CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2	Not Available	53.88%
Matrix_234	RAP2.3	Not Available	53.86%
Matrix_354	AHL12	Not Available	53.85%
Matrix_432	AT1G77920	Not Available	53.81%
Motif_232	ABADESI1	Responsive to ABA and desiccation; Motif I of rice rab16A-D (initially called rab-21); Expressed in seeds late during embryogenesis; Induced by ABA and osmotic stress in vegetative tissues; Contains ACGT motif; transacting factor: TAF-1	53.76%
Matrix_69	AT2G03500	Not Available	53.74%
Matrix_317	AT1G06070; AT2G31370; AT2G40620	Not Available	53.70%
Matrix_152	EIL1; AT5G65100	Not Available	53.70%
Matrix_427	ZAT14	Not Available	53.65%
Matrix_37	GATA27	Not Available	53.65%
Matrix_172	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	53.63%
Matrix_225	MYB52	Not Available	53.54%
Matrix_408	GATA12	Not Available	53.51%
Matrix_175	Dof5.7	Not Available	53.45%
Matrix_336	AT5G08520	Not Available	53.34%
Matrix_329	WRKY12	Not Available	53.32%
Matrix_51	LFY	Not Available	53.32%
Matrix_256	IXR11; KNAT5; KNAT4; KNAT3	Not Available	53.31%
Matrix_38	SPL14	Not Available	53.24%
Matrix_446	LBD16	Not Available	53.24%
Matrix_280	TCP24; TCP1; BRC2; ATTCP18	Not Available	53.19%
Matrix_430	TOE2	Not Available	53.05%
Matrix_77	PRR5	Not Available	53.04%
Matrix_190	ATERF1	Not Available	53.04%
Matrix_207	WRKY10; WRKY57; AT2G44745; ATWRKY13; WRKY49	Not Available	53.00%
Matrix_463	HAT3.1	Not Available	52.98%
Matrix_162	AtPHR1	Not Available	52.97%
Matrix_192	FHY3/FAR1	Not Available	52.95%
Matrix_380	ATMYR1	Not Available	52.93%
Matrix_214	AP1	Not Available	52.90%
Matrix_443	AGL15	Not Available	52.86%
Matrix_230	ARR11	Not Available	52.83%
Matrix_406	ATERF-7	Not Available	52.79%
Matrix_50	ATERF14; AT5G43410	Not Available	52.77%
Matrix_508	APL; AT3G12730; AT3G24120; UNE16	Not Available	52.65%
Matrix_102	WRKY21	Not Available	52.60%
Motif_480	ABRE2HVA1	ABA responsive element, ABRE2, found in barley HVA1 gene encoding a class 3 late embryogenesis-abundant protein; stress response	52.59%
Matrix_260	CAMTA3	Not Available	52.57%
Matrix_4	ARR14	Not Available	52.53%
Matrix_313	ATMYB65; MYB33	Not Available	52.51%
Matrix_374	AT5G07580; AT5G61590	Not Available	52.47%
Motif_281	ABRE3OSRAB16	ABA-responsive element of rice rab16 and alpha-amylase genes	52.42%
Matrix_20	ANAC030; NST1; NAC066	Not Available	52.39%
Matrix_210	ARR1	Not Available	52.36%
Motif_534	GBOXRELOSAMY3	G box-related element found in Amy3D (amylase) promoter of rice; Similar to ABRE	52.26%
Matrix_182	ATHB6	Not Available	52.21%
Matrix_293	WRKY38	Not Available	52.21%
Matrix_91	CRF3	Not Available	52.15%
Matrix_382	AT3G04850	Not Available	52.03%
Matrix_357	WRKY61; WRKY6; WRKY9; WRKY36; WRKY47; WRKY42; WRKY31; WRKY72	Not Available	51.98%
Matrix_461	ATHB12	Not Available	51.97%
Matrix_419	TGA9; PAN; TGA6; bZIP65	Not Available	51.95%
Matrix_502	AT3G13040	Not Available	51.95%
Matrix_220	WRKY18	Not Available	51.84%
Matrix_340	HSFC1	Not Available	51.79%
Matrix_471	KAN4	Not Available	51.78%
Matrix_309	FLC	Not Available	51.72%
Matrix_16	AT3G04450; PHL1	Not Available	51.72%
Matrix_415	WRKY27	Not Available	51.60%
Matrix_475	AT5G64220	Not Available	51.57%
Matrix_395	AT1G19210; ORA47; AT4G31060; AT5G21960	Not Available	51.54%
Matrix_305	PIF4	Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses	51.45%
Matrix_361	AT1G25550	Not Available	51.31%
Matrix_80	BIM1	Not Available	51.27%
Matrix_84	AtGRF6	Not Available	51.27%
Matrix_240	AT4G29000	Not Available	51.24%
Matrix_193	RAV1	Not Available	51.23%
Matrix_265	NGA3	Not Available	51.23%
Matrix_125	AHL12	Not Available	51.19%
Matrix_40	TCP2	Not Available	51.02%
Matrix_480	BES1	Not Available	51.00%
Matrix_157	LHY; RVE2	Not Available	50.93%
Matrix_282	bZIP60	Not Available	50.85%
Matrix_424	MYB59	Not Available	50.80%
Matrix_135	ABI3	Not Available	50.79%
Matrix_495	HD-GL2-1; ANL2	Not Available	50.78%
Matrix_378	ATERF1	Not Available	50.75%
Matrix_186	FHY3	Not Available	50.70%
Matrix_401	MYB55	Not Available	50.69%
Matrix_261	ATERF-1	Not Available	50.69%
Matrix_494	OBP4	Not Available	50.63%
Matrix_523	FUSCA3	Not Available	50.60%
Matrix_377	AT1G75490; DREB2C; AT2G40350; AT5G18450	Not Available	50.56%
Matrix_462	ATERF-8	Not Available	50.54%
Matrix_169	E2F1	Not Available	50.50%
Matrix_435	ATHB51	Not Available	50.48%
Matrix_161	MYBC1; AT3G10760; LUX; AT5G05090; AT5G59570	Not Available	50.43%
Matrix_142	ZFP8	Not Available	50.41%
Matrix_243	RAP2.12; RAP2.2	Not Available	50.41%
Matrix_114	EPR1; AT3G10113	Not Available	50.39%
Matrix_146	ORA47	Not Available	50.38%
Matrix_350	ARR14	Not Available	50.37%
Matrix_404	OBP4	Not Available	50.35%
Matrix_155	RAP2.6; ERF110; ABR1	Not Available	50.34%
Matrix_353	HAT5	Not Available	50.30%
Matrix_321	HRD	Not Available	50.30%
Matrix_409	DEAR3	Not Available	50.29%
Matrix_181	Dof5.7	Not Available	50.28%
Matrix_72	CDF2	Not Available	50.26%
Matrix_324	AT2G01060	Not Available	50.22%
Matrix_61	ATCBF3	Not Available	50.21%
Motif_82	ACGTSEED3	ACGT motif related to seed expression; Gene: synthetic; wild-type motif (Iwt) containing G-box-related sequence; transacting factor: bZIP; A tobacco bZip transcription activator (TAF-1) binding site	50.18%
Matrix_52	ZAT18	Not Available	50.17%
Matrix_520	ARR14	Not Available	50.12%
Matrix_13	HAT5	Not Available	50.07%
Matrix_492	ETT	Not Available	50.05%
Matrix_154	AT1G22190; AT1G36060; AT1G64380; RAP2.4; AT2G20880; AT2G22200; AT4G13620; AT4G28140; AT4G39780; AT5G65130	Not Available	50.03%
Matrix_197	NAP	Not Available	50.00%