PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_402
Name: TOE1
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_410	TOE2	Not Available	89.99%
Matrix_327	ARR11	Not Available	67.39%
Matrix_479	TOE1	Not Available	66.26%
Matrix_430	TOE2	Not Available	66.04%
Matrix_265	NGA3	Not Available	63.55%
Matrix_193	RAV1	Not Available	63.55%
Matrix_454	AT1G77200; ATERF38; AT4G16750; AT5G52020	Not Available	60.45%
Matrix_268	EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105	Not Available	60.08%
Matrix_171	LBD3; LBD4	Not Available	59.89%
Matrix_151	ASIL1	Not Available	59.54%
Matrix_56	BZIP17; BZIP28; BZIP49	Not Available	59.17%
Matrix_38	SPL14	Not Available	58.91%
Matrix_59	AT4G00238; AT4G00250	Not Available	58.87%
Matrix_321	HRD	Not Available	58.07%
Matrix_166	TGA4	Not Available	57.60%
Matrix_377	AT1G75490; DREB2C; AT2G40350; AT5G18450	Not Available	57.54%
Matrix_311	TGA1	Not Available	57.40%
Matrix_399	TGA1	Not Available	57.28%
Matrix_332	SPT; ALC	Not Available	57.21%
Matrix_92	AT1G33760	Not Available	57.20%
Matrix_409	DEAR3	Not Available	57.17%
Matrix_286	GATA7	Not Available	57.10%
Matrix_141	AT3G25990	Not Available	57.10%
Motif_665	ACEATCHS	ACEAtCHS (ACGT containing element) found in the LRU (light-responsive unit) in Arabidopsis chalcone synthase (CHS) gene promoter; Required for UV-B and UV-1/blue light responsiveness; Transcriptional repression by AtMYB4 controls production of UV-protecting sun screens in Arabidopsis; AtMYB4 mutant shows enhanced levels of sinapate ester in leaves and tolerance of UV-B irradiation; AtMYB4 expression is downregulated by exposure to UV-B light; Identification of UV/blue light-response elements in the Arabidopsis thaliana chalcone synthase promoter using a homologous protoplast transient expression system	57.03%
Matrix_280	TCP24; TCP1; BRC2; ATTCP18	Not Available	56.89%
Matrix_249	WRKY11	Not Available	56.78%
Matrix_12	EIN3; EIL2	Not Available	56.67%
Matrix_237	MYB55	Not Available	56.61%
Matrix_475	AT5G64220	Not Available	56.07%
Matrix_452	MYB46	Not Available	56.07%
Matrix_226	GATA1	Not Available	56.06%
Motif_18	5659BOXLELAT5659	56/59 box; A sequence motif shared between the tomato LAT(Late Anther Tomato)56 and LAT59 promoters; Found in -103 to -94 in LAT56 and in -114 to -105 in LAT59; Involved in modulating the activity of the LAT gene promoters in pollen	56.02%
Matrix_416	ASL5	Not Available	55.97%
Matrix_374	AT5G07580; AT5G61590	Not Available	55.91%
Matrix_185	AHL25	Not Available	55.89%
Matrix_181	Dof5.7	Not Available	55.83%
Matrix_391	AHL20	Not Available	55.68%
Matrix_447	RVE1	Not Available	55.55%
Matrix_355	ERF10; ERF11	Not Available	55.52%
Matrix_230	ARR11	Not Available	55.52%
Matrix_61	ATCBF3	Not Available	55.52%
Matrix_259	AT1G50680; AT1G51120	Not Available	55.45%
Matrix_128	TGA2	Not Available	55.41%
Matrix_244	DREB2C	Not Available	55.29%
Matrix_395	AT1G19210; ORA47; AT4G31060; AT5G21960	Not Available	55.13%
Matrix_142	ZFP8	Not Available	55.06%
Matrix_113	ABI5	Not Available	54.95%
Matrix_326	AT5G07310; Rap2.6L; AT5G61890	Not Available	54.84%
Matrix_196	TCP20; AT5G41030	Not Available	54.75%
Matrix_52	ZAT18	Not Available	54.74%
Matrix_80	BIM1	Not Available	54.67%
Matrix_46	AT4G21895	Not Available	54.64%
Matrix_99	DOF4.7	Not Available	54.51%
Motif_403	WINPSTPIIIK	Binding site of wound-inducible nuclear protein from wounded tomato leaves; Found in the promoter region of a protease inhibitor IIK gene from potato	54.28%
Matrix_434	ARR11	Not Available	54.28%
Matrix_180	SPL1	Not Available	54.22%
Matrix_350	ARR14	Not Available	54.13%
Matrix_176	MYB98	Not Available	54.12%
Motif_92	ABREATRD22	ABRE (ABA responsive element) in Arabidopsis dehydration-responsive gene rd22	54.08%
Matrix_91	CRF3	Not Available	54.03%
Matrix_500	WRKY43	Not Available	54.02%
Motif_167	SBP-box promoter motif	Molecular characterisation of the Arabidopsis SBP-box genes	54.02%
Motif_351	GARE1OSREP1	Gibberellin-responsive element (GARE) found in the promoter region of a cystein proteinase (REP-1) gene in rice	53.99%
Matrix_168	AHL25	Not Available	53.88%
Matrix_101	ERF5	Not Available	53.88%
Matrix_261	ATERF-1	Not Available	53.87%
Matrix_57	WIN1; SHN3; SHN2	Not Available	53.84%
Matrix_308	INO	Not Available	53.66%
Matrix_521	AHL20	Not Available	53.63%
Motif_358	UP2ATMSD	Up2 motif found in 193 of the 1184 up-regulated genes after main stem decapitation in Arabidopsis	53.60%
Matrix_322	NST3; ANAC015; BRN2	Not Available	53.58%
Matrix_50	ATERF14; AT5G43410	Not Available	53.57%
Motif_616	BZIP12; ABI5	The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesis	53.56%
Matrix_287	ERF2	Not Available	53.43%
Matrix_493	AT1G22985; AT1G71130	Not Available	53.41%
Matrix_157	LHY; RVE2	Not Available	53.41%
Matrix_129	ABF1	Not Available	53.35%
Matrix_195	GATA2; GATA4	Not Available	53.22%
Matrix_394	DREB_U	Not Available	53.16%
Matrix_432	AT1G77920	Not Available	53.10%
Motif_127	SBOXATRBCS	S-box conserved in several rbcS promoters in Arabidopsis; ABI4 binding site; Important for the sugar and ABA responsiveness of CMA5	53.09%
Matrix_242	AT2G25820; AT3G16280; AT4G32800; TINY2; tny	Not Available	53.09%
Matrix_212	ATHB-12	Not Available	52.99%
Motif_138	RAP2.2	Transcription factor RAP2.2 and its interacting partner SINAT2: stable elements in the carotenogenesis of Arabidopsis leaves	52.92%
Matrix_54	AHL20	Not Available	52.87%
Motif_209	AtSR1	A calmodulin-binding/CGCG box DNA-binding protein family involved in multiple signaling pathways in plants	52.84%
Matrix_233	MYC3	Not Available	52.78%
Motif_243	TELOBOXATEEF1AA1	telo-box (telomere motif) found in the Arabidopsis (A.t.) eEF1AA1 gene promoter; Conserved in all known plant eEF1A gene promoters; Found in the 5' region of numerous genes encoding components of the translational apparatus; Required for the activation of expression in root primordia; Acts co-operatively with tef-box; Binding site of AtPur alpha-1; Plant interstitial telomere mitifs participate in the control of gene expression in root meristems	52.72%
Matrix_362	DEAR3	Not Available	52.58%
Matrix_314	WRKY65; WRKY14; WRKY35; WRKY69; WRKY16; ATWRKY52	Not Available	52.56%
Motif_516	BZIP12; ABI5	The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesis	52.55%
Matrix_317	AT1G06070; AT2G31370; AT2G40620	Not Available	52.55%
Matrix_316	WRKY15; WRKY39; WRKY7; WRKY74	Not Available	52.35%
Matrix_78	AT3G45610	Not Available	52.35%
Matrix_273	ANAC55	Not Available	52.32%
Matrix_385	DEAR4	Not Available	52.15%
Matrix_471	KAN4	Not Available	52.13%
Matrix_437	MYC2	Not Available	51.99%
Motif_288	NONAMERMOTIFTAH3H4	Nonamer motif found in promoter of wheat histone genes H3 and H4	51.92%
Matrix_241	HB-1; AT5G44180	Not Available	51.91%
Matrix_320	MYC4	Not Available	51.90%
Matrix_271	AT3G16350	Not Available	51.83%
Matrix_114	EPR1; AT3G10113	Not Available	51.71%
Matrix_408	GATA12	Not Available	51.70%
Matrix_477	RAV1	Not Available	51.68%
Matrix_467	RAV1	Not Available	51.68%
Matrix_34	RAV1_2	RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants	51.68%
Matrix_109	GBF3	Not Available	51.59%
Matrix_60	AT1G01260; AT5G57150	Not Available	51.58%
Matrix_88	AHL12	Not Available	51.57%
Matrix_177	ADOF2	Not Available	51.43%
Matrix_120	BEE2	Not Available	51.42%
Motif_232	ABADESI1	Responsive to ABA and desiccation; Motif I of rice rab16A-D (initially called rab-21); Expressed in seeds late during embryogenesis; Induced by ABA and osmotic stress in vegetative tissues; Contains ACGT motif; transacting factor: TAF-1	51.41%
Matrix_478	AT1G01250	Not Available	51.31%
Matrix_323	BIM3	Not Available	51.27%
Matrix_489	RAV1	Not Available	51.24%
Matrix_442	AT5G62260	Not Available	51.11%
Motif_540	CCA1 motif1 BS in CAB1	A myb-related transcription factor is involved in the phytochrome regulation of an Arabidopsis Lhcb gene	51.03%
Matrix_93	YAB5	Not Available	50.98%
Matrix_131	HDG12; EDT1; GL2; HDG8	Not Available	50.98%
Matrix_156	POC1	Not Available	50.96%
Matrix_143	GATA14; GATA6; GATA5	Not Available	50.86%
Motif_191	AtERF-4; AtERF-3	Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression	50.84%
Matrix_32	AHL25	Not Available	50.83%
Matrix_158	AT1G03040; LRL1; UNE12; LRL2; LRL3	Not Available	50.77%
Matrix_519	ATDOF2.4	Not Available	50.74%
Matrix_411	DOF5.6	Not Available	50.71%
Motif_4	NAP	An abscisic acid-AtNAP transcription factor-SAG113 protein phosphatase 2C regulatory chain for controlling dehydration in senescing Arabidopsis leaves	50.68%
Matrix_446	LBD16	Not Available	50.63%
Matrix_465	MYC4	Not Available	50.56%
Matrix_277	RAP2.6	Not Available	50.51%
Matrix_116	ANAC55	Not Available	50.50%
Matrix_419	TGA9; PAN; TGA6; bZIP65	Not Available	50.45%
Matrix_330	MYC2; TT8	Not Available	50.40%
Matrix_150	UNE10; PIF7	Not Available	50.37%
Motif_579	WRECSAA01	Wound-responsive element (WRE) found in the promoter region of cucumber ascorbate oxidase gene, CsAAO1; Binding site of proteins in tobacco nuclear extracts	50.34%
Matrix_427	ZAT14	Not Available	50.32%
Motif_233	DRE1COREZMRAB17	DRE1 core found in maize rab17 gene promoter; DRE1 was protected, in in vivo footprinting, by a protein in embryos specifically, but in leaves, was protected when was treated with ABA and drought; rab17 is expressed during late embryogenesis, and is induced by ABA	50.29%
Motif_166	RAP2.2	Transcription factor RAP2.2 and its interacting partner SINAT2: stable elements in the carotenogenesis of Arabidopsis leaves	50.22%
Motif_101	MYB61	AtMYB61, an R2R3-MYB transcription factor, functions as a pleiotropic regulator via a small gene network	50.21%
Motif_17	AUXRETGA1GMGH3	TGA-box #1 in putative auxin-resonsive element (AUXRE) of soybean GH3 promoter; Strong binding site for proteins in plant nuclear extracts	50.19%
Motif_520	AMYBOX1	amylase box; Conserved sequence found in 5'-upstream region of alpha-amylase gene of rice, wheat, barley	50.11%
Matrix_73	DEAR3; RAP2.9; RAP2.10	Not Available	50.11%