PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_401
Name: MYB55
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_455	MYB111	Not Available	81.85%
Matrix_315	MYB111	Not Available	75.56%
Matrix_225	MYB52	Not Available	74.02%
Matrix_337	MYB46	Not Available	73.55%
Matrix_299	PFG3	Not Available	69.71%
Matrix_461	ATHB12	Not Available	66.26%
Matrix_371	MYB7; AtMYB6; AtMYB32; ATMYB4	Not Available	65.56%
Matrix_351	HAT9; ATHB-4; ATHB2; HAT22; HAT14	Not Available	65.38%
Matrix_211	MYB3	Not Available	63.90%
Matrix_71	ATHB7	Not Available	63.65%
Matrix_424	MYB59	Not Available	61.88%
Matrix_41	anac058	Not Available	60.62%
Matrix_206	CUC1; ANAC100	Not Available	60.58%
Matrix_302	HAT1; HAT2	Not Available	59.80%
Matrix_518	AT2G21230	Not Available	58.95%
Matrix_469	NAC041; NAC083	Not Available	58.74%
Motif_207	MAMMALENHAN	Core sequence in enhancers from polyoma virus and from the IgM heavy chain gene	58.47%
Motif_51	MYB46	Identification of a cis-acting regulatory motif recognized by MYB46, a master transcriptional regulator of secondary wall biosynthesis	58.05%
Matrix_12	EIN3; EIL2	Not Available	57.87%
Matrix_59	AT4G00238; AT4G00250	Not Available	57.61%
Matrix_151	ASIL1	Not Available	57.26%
Matrix_435	ATHB51	Not Available	57.02%
Matrix_308	INO	Not Available	56.99%
Matrix_274	EDF3	Not Available	56.59%
Matrix_14	ZCW32; AT5G62610	Not Available	56.21%
Matrix_182	ATHB6	Not Available	56.18%
Motif_332	SV40COREENHAN	SV40 core enhancer; Similar sequences found in rbcS genes	56.07%
Matrix_131	HDG12; EDT1; GL2; HDG8	Not Available	55.90%
Matrix_259	AT1G50680; AT1G51120	Not Available	55.83%
Matrix_512	HAT3	Not Available	55.82%
Matrix_44	CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2	Not Available	55.77%
Matrix_93	YAB5	Not Available	55.62%
Matrix_347	WOX14; WOX10	Not Available	55.28%
Matrix_490	AtMYB77; ATMYB44	Not Available	54.96%
Matrix_253	ETT	Not Available	54.83%
Matrix_268	EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105	Not Available	54.65%
Matrix_329	WRKY12	Not Available	54.14%
Matrix_317	AT1G06070; AT2G31370; AT2G40620	Not Available	53.90%
Matrix_21	HSFC1	Not Available	53.83%
Motif_62	AtMYB44	Two novel MYB homologues with changed expression in late embryogenesis-defective Arabidopsis mutants	53.79%
Matrix_249	WRKY11	Not Available	53.69%
Matrix_70	GATA26	Not Available	53.67%
Matrix_415	WRKY27	Not Available	53.66%
Motif_165	AP3SV40	AP-3 binding site consensus sequence in enhancer regions of SV40, MMTV, MLV, IL2	53.56%
Matrix_313	ATMYB65; MYB33	Not Available	53.50%
Motif_214	TAC1	Regulation of telomerase in Arabidopsis by BT2, an apparent target of TELOMERASE ACTIVATOR1	53.41%
Matrix_171	LBD3; LBD4	Not Available	53.37%
Matrix_303	ATWOX13	Not Available	53.36%
Matrix_380	ATMYR1	Not Available	53.28%
Matrix_355	ERF10; ERF11	Not Available	53.21%
Matrix_326	AT5G07310; Rap2.6L; AT5G61890	Not Available	53.17%
Matrix_406	ATERF-7	Not Available	53.07%
Matrix_427	ZAT14	Not Available	52.93%
Matrix_110	ATABI4; AT3G57600	Not Available	52.91%
Matrix_316	WRKY15; WRKY39; WRKY7; WRKY74	Not Available	52.87%
Matrix_178	HSFB2A	Not Available	52.79%
Matrix_462	ATERF-8	Not Available	52.59%
Matrix_293	WRKY38	Not Available	52.57%
Motif_282	D4GMAUX28	D4; DNase I protected sequence found in the soybean auxin responsive gene, Aux28, promoter; D1 and D4 share a very similar core sequence TAGTXXCTGT and TAGTXCTGT, respectively; D1/D4-like sequence were identified in several other auxin-responsive genes	52.44%
Matrix_80	BIM1	Not Available	52.44%
Matrix_492	ETT	Not Available	52.35%
Matrix_314	WRKY65; WRKY14; WRKY35; WRKY69; WRKY16; ATWRKY52	Not Available	52.15%
Matrix_197	NAP	Not Available	52.09%
Matrix_260	CAMTA3	Not Available	52.05%
Matrix_85	SPL5	Not Available	51.96%
Matrix_231	HDG2; HDG3; ATML1; HB-7	Not Available	51.96%
Matrix_500	WRKY43	Not Available	51.89%
Matrix_53	MYC3	Not Available	51.83%
Matrix_416	ASL5	Not Available	51.59%
Matrix_143	GATA14; GATA6; GATA5	Not Available	51.56%
Motif_381	GATA-2; GATA-4; GATA-3; GATA-1	Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics	51.54%
Matrix_8	KAN1	Not Available	51.48%
Matrix_65	POC1; PIL1	Not Available	51.36%
Motif_284	GT-2	DNA binding factor GT-2 from Arabidopsis	51.07%
Motif_91	SORLIP4AT	one of Sequences Over-Represented in Light-Induced Promoters (SORLIPs) in Arabidopsis; Computationally identified phyA-induced motifs; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data	51.06%
Matrix_87	AT1G19000	Not Available	50.97%
Matrix_280	TCP24; TCP1; BRC2; ATTCP18	Not Available	50.97%
Matrix_333	GATA3	Not Available	50.59%
Matrix_188	SPL4	Not Available	50.56%
Matrix_431	ATHB21; HB-3	Not Available	50.50%
Matrix_367	REM1	Not Available	50.33%
Motif_384	SITEIOSPCNA	Site I of rice PCNA (proliferating cell nuclear antigen) gene; Found at -201 to -194; Resemble G-box; May contribute in part to transcriptional activation	50.27%
Matrix_374	AT5G07580; AT5G61590	Not Available	50.26%
Motif_487	ACIIIPVPAL2	ACIII element found at -246 to -238 of bean PAL2 promoter; ACIII element is required for vascular-specific gene expression; See also ACIPVPAL2 and ACIIPVPAL2; Three AC-elements, which are possible Myb protein binding sites, together with a G-box, interact to direct the complex patterns of tissu-specific expression of pAL2 gene	50.23%
Motif_656	AG BS in SUP	Dimerization specificity of Arabidopsis MADS domain homeotic proteins APETALA1, APETALA3, PISTILLATA, and AGAMOUS	50.14%
Matrix_199	AT1G69170; SPL9; SPL15; SPL13A; SPL13B	Not Available	50.11%
Motif_87	AGL22; AGL20; AGL24	Regulation of floral patterning by flowering time genes	50.11%
Matrix_307	RGL2; RGL3	Not Available	50.05%