PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_397
Name: GT2L
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_170	AT5G47660	Not Available	72.34%
Matrix_175	Dof5.7	Not Available	69.87%
Motif_442	GT2OSPHYA	GT-2 (a rice nuclear protein) binding site in a rice phyA promoter; phyA gene are transcriptionaly repressed in response to light; One of GT elements;The HMG-1/Y protein PF1 stimulates binding of the GT-2 to PHYA gene promoter	68.04%
Motif_556	INTRONUPPER	5' exon-intron splice junctions of plant introns; Plant intron upper sequence; Consensus sequence for plant introns	66.78%
Motif_4	NAP	An abscisic acid-AtNAP transcription factor-SAG113 protein phosphatase 2C regulatory chain for controlling dehydration in senescing Arabidopsis leaves	65.98%
Matrix_341	HMGA	Not Available	64.00%
Matrix_406	ATERF-7	Not Available	63.94%
Matrix_380	ATMYR1	Not Available	63.91%
Matrix_154	AT1G22190; AT1G36060; AT1G64380; RAP2.4; AT2G20880; AT2G22200; AT4G13620; AT4G28140; AT4G39780; AT5G65130	Not Available	63.09%
Matrix_446	LBD16	Not Available	63.05%
Matrix_201	AT1G74840	Not Available	62.94%
Matrix_311	TGA1	Not Available	62.79%
Matrix_139	OBF5	Not Available	62.75%
Motif_651	E2Fc; E2Fd; E2Fe; E2Fa	The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants	62.41%
Matrix_462	ATERF-8	Not Available	62.30%
Matrix_87	AT1G19000	Not Available	61.82%
Matrix_220	WRKY18	Not Available	61.75%
Matrix_166	TGA4	Not Available	61.01%
Matrix_325	WRKY4; WRKY3; WRKY58; ATWRKY34; WRKY20; ATWRKY2	Not Available	60.89%
Matrix_504	WRKY40	Not Available	60.76%
Matrix_470	WRKY18	Not Available	60.75%
Matrix_395	AT1G19210; ORA47; AT4G31060; AT5G21960	Not Available	60.74%
Matrix_17	WRKY22	Not Available	60.15%
Matrix_235	WRKY67; WRKY64; WRKY63; WRKY66	Not Available	60.04%
Matrix_430	TOE2	Not Available	60.03%
Matrix_3	WRKY48	Not Available	59.89%
Matrix_207	WRKY10; WRKY57; AT2G44745; ATWRKY13; WRKY49	Not Available	59.80%
Matrix_384	ATWRKY17	Not Available	59.79%
Matrix_368	ATWRKY56; WRKY45; WRKY75; WRKY24	Not Available	59.61%
Matrix_370	WRKY50; WRKY51	Not Available	59.51%
Matrix_490	AtMYB77; ATMYB44	Not Available	59.45%
Matrix_102	WRKY21	Not Available	59.39%
Matrix_142	ZFP8	Not Available	59.36%
Matrix_515	ddf2; ATCBF3; CBF1; CBF4	Not Available	59.32%
Matrix_128	TGA2	Not Available	59.17%
Matrix_56	BZIP17; BZIP28; BZIP49	Not Available	59.01%
Matrix_226	GATA1	Not Available	58.87%
Matrix_268	EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105	Not Available	58.86%
Matrix_289	WRKY25	Not Available	58.79%
Matrix_75	WRKY29	Not Available	58.66%
Matrix_263	WRKY33; WRKY19; WRKY32	Not Available	58.55%
Matrix_53	MYC3	Not Available	58.37%
Matrix_346	AtMYB70; MYB73	Not Available	58.19%
Matrix_280	TCP24; TCP1; BRC2; ATTCP18	Not Available	57.79%
Matrix_423	AT3G04030	Not Available	57.72%
Matrix_195	GATA2; GATA4	Not Available	57.68%
Matrix_432	AT1G77920	Not Available	57.64%
Matrix_349	CDC5	Not Available	57.61%
Matrix_187	CDC5	Not Available	57.61%
Motif_278	CELLCYCLESC	cell cycle box found in URS2 (-940/-200) of HO gene of S.cerevisiae; cell-cycle-specific activation of transcription	57.54%
Matrix_116	ANAC55	Not Available	57.46%
Matrix_308	INO	Not Available	57.45%
Motif_403	WINPSTPIIIK	Binding site of wound-inducible nuclear protein from wounded tomato leaves; Found in the promoter region of a protease inhibitor IIK gene from potato	57.43%
Matrix_387	ORA47	Not Available	57.34%
Motif_167	SBP-box promoter motif	Molecular characterisation of the Arabidopsis SBP-box genes	57.09%
Matrix_12	EIN3; EIL2	Not Available	57.03%
Matrix_286	GATA7	Not Available	56.91%
Matrix_38	SPL14	Not Available	56.81%
Matrix_37	GATA27	Not Available	56.66%
Matrix_367	REM1	Not Available	56.58%
Matrix_312	ARF11; MP; ARF6; IAA21; ARF8; ARF4	Not Available	56.58%
Matrix_390	GT-1	Not Available	56.52%
Matrix_241	HB-1; AT5G44180	Not Available	56.51%
Matrix_283	GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC	Not Available	56.29%
Matrix_419	TGA9; PAN; TGA6; bZIP65	Not Available	56.24%
Matrix_176	MYB98	Not Available	56.19%
Matrix_193	RAV1	Not Available	55.91%
Matrix_265	NGA3	Not Available	55.91%
Matrix_489	RAV1	Not Available	55.85%
Matrix_101	ERF5	Not Available	55.80%
Matrix_248	ZFP5	Not Available	55.69%
Matrix_202	WRKY71; WRKY28; WRKY8	Not Available	55.58%
Motif_435	E2FBNTRNR	E2Fb found in the tobacco RNR (Ribonucleotide reductase) gene promoter; Binding site of tobacco E2F; Involved in upregulation of the promoter at G1/S transition; dE2F (distal reverse E2F element) important for regulating specific RNR1a gene expression in respsonse to UV-C irradiation	55.51%
Motif_226	E2F1OSPCNA	re2f-1 found in the promoter of rice PCNA gene; Located between -142 and -135; te2f-1 found in the promote of Tobacco PCBA gene; Located between -122 and -115; Binding site of OsE2F1 and OsE2F2; Involved in transcriptional activation in actively dividing cells and tissue	55.49%
Matrix_420	ANAC58	Not Available	55.48%
Matrix_260	CAMTA3	Not Available	55.36%
Matrix_382	AT3G04850	Not Available	55.25%
Matrix_447	RVE1	Not Available	55.18%
Matrix_197	NAP	Not Available	55.17%
Matrix_277	RAP2.6	Not Available	55.07%
Matrix_352	LEC2	Not Available	55.05%
Matrix_61	ATCBF3	Not Available	55.01%
Motif_674	SPL4; SPL1; SPL5	Molecular characterisation of the Arabidopsis SBP-box genes. Gene,A novel zinc-binding motif revealed by solution structures of DNA-binding domains of Arabidopsis SBP-family transcription factors	54.93%
Matrix_415	WRKY27	Not Available	54.85%
Matrix_454	AT1G77200; ATERF38; AT4G16750; AT5G52020	Not Available	54.74%
Matrix_408	GATA12	Not Available	54.66%
Motif_123	GT-1	Molecular dissection of GT-1 from Arabidopsis	54.51%
Motif_544	CACGCAATGMGH3	Sequence found in D4 element in Soybean GH3 gene promoter; Showed constitutive activity with TGTCTC element; Confers auxin inducibility; Binding site of nuclear protein	54.45%
Matrix_505	GATA8	Not Available	54.45%
Matrix_479	TOE1	Not Available	54.40%
Matrix_204	WOX13	Not Available	54.36%
Motif_361	SORLREP4AT	one of Sequences Over-Represented in Light-Repressed Promoters (SORLREPs) in Arabidopsis; Computationally identified phyA-repressed motifs; Common in circadian-regulated promoters; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data	54.35%
Matrix_502	AT3G13040	Not Available	54.33%
Matrix_328	AT1G76580	Not Available	54.28%
Matrix_245	WRKY62; WRKY38	Not Available	54.19%
Matrix_508	APL; AT3G12730; AT3G24120; UNE16	Not Available	54.15%
Motif_284	GT-2	DNA binding factor GT-2 from Arabidopsis	54.04%
Matrix_418	KNAT6; KNAT2	Not Available	53.92%
Matrix_457	TGA2	Not Available	53.91%
Matrix_148	WRKY60	Not Available	53.79%
Matrix_244	DREB2C	Not Available	53.69%
Motif_444	OCTAMOTIF2	Octamer motif found in histone-gene-specific consensus sequences; 200 base upstream from the initiation codon ATG; Exist in all of seven plant histone genes	53.60%
Matrix_73	DEAR3; RAP2.9; RAP2.10	Not Available	53.58%
Motif_244	ABRE-like binding site motif	Not Available	53.55%
Matrix_472	ZN_C2_H2	Not Available	53.52%
Matrix_168	AHL25	Not Available	53.51%
Matrix_100	AT1G48610	Not Available	53.29%
Motif_253	S1FSORPL21	S1F binding site (S1 site) in spinach (S.o.) RPL21 gene encoding the plastid ribosomal protein L21; Negative element; Might play a role in downregulating RPL21 promoter activity	53.21%
Matrix_242	AT2G25820; AT3G16280; AT4G32800; TINY2; tny	Not Available	53.14%
Matrix_161	MYBC1; AT3G10760; LUX; AT5G05090; AT5G59570	Not Available	53.10%
Matrix_256	IXR11; KNAT5; KNAT4; KNAT3	Not Available	53.08%
Matrix_478	AT1G01250	Not Available	53.07%
Matrix_434	ARR11	Not Available	53.01%
Matrix_287	ERF2	Not Available	52.75%
Matrix_155	RAP2.6; ERF110; ABR1	Not Available	52.69%
Matrix_322	NST3; ANAC015; BRN2	Not Available	52.69%
Matrix_59	AT4G00238; AT4G00250	Not Available	52.65%
Matrix_162	AtPHR1	Not Available	52.51%
Matrix_354	AHL12	Not Available	52.47%
Matrix_46	AT4G21895	Not Available	52.38%
Matrix_171	LBD3; LBD4	Not Available	52.37%
Matrix_99	DOF4.7	Not Available	52.27%
Matrix_491	AT1G68670; AT3G25790	Not Available	52.25%
Matrix_449	BIM2	Not Available	52.24%
Matrix_276	AT1G01520; AT3G09600; AT4G01280; LCL1; AT5G52660	Not Available	52.16%
Matrix_385	DEAR4	Not Available	52.14%
Matrix_84	AtGRF6	Not Available	52.13%
Matrix_259	AT1G50680; AT1G51120	Not Available	52.08%
Matrix_27	ATAIB; ATNIG1	Not Available	52.00%
Matrix_292	FTQ4	Not Available	51.99%
Matrix_271	AT3G16350	Not Available	51.92%
Matrix_521	AHL20	Not Available	51.92%
Matrix_93	YAB5	Not Available	51.88%
Matrix_323	BIM3	Not Available	51.84%
Matrix_273	ANAC55	Not Available	51.84%
Matrix_427	ZAT14	Not Available	51.81%
Matrix_230	ARR11	Not Available	51.71%
Motif_620	DREB1&2 BS in rd29a	Related to responsiveness to drought, low-temperature or high-salt stress; Binding site of DREB1 and DREB2: Binding site of Arabidopsis CBF1(C-repeat/DRE binding factor); Overexpression of DREB1A activated the expression of stress tolerance genes; CBF1 overexpression induces COR genes and enhances freezing tolerance; Heterologous CBF1 expression enhances oxidative stresses tolerance; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in Arabidopsis;Improving plant drought, salt, and freezing tolerance by gene transfer of a single stress-inducible transcription factor	51.67%
Matrix_158	AT1G03040; LRL1; UNE12; LRL2; LRL3	Not Available	51.65%
Matrix_69	AT2G03500	Not Available	51.57%
Matrix_330	MYC2; TT8	Not Available	51.56%
Motif_421	TAC1	Regulation of telomerase in Arabidopsis by BT2, an apparent target of TELOMERASE ACTIVATOR1	51.54%
Matrix_200	PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815	Not Available	51.50%
Matrix_465	MYC4	Not Available	51.47%
Matrix_65	POC1; PIL1	Not Available	51.42%
Matrix_513	SOL1; TSO1; TCX2	Not Available	51.35%
Matrix_169	E2F1	Not Available	51.13%
Matrix_231	HDG2; HDG3; ATML1; HB-7	Not Available	51.09%
Matrix_185	AHL25	Not Available	51.06%
Matrix_120	BEE2	Not Available	51.03%
Matrix_240	AT4G29000	Not Available	51.01%
Matrix_350	ARR14	Not Available	50.80%
Matrix_54	AHL20	Not Available	50.72%
Matrix_163	AT2G20110	Not Available	50.70%
Motif_602	E2Fc; E2Fd	The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants	50.68%
Matrix_389	ILR3	Not Available	50.65%
Matrix_143	GATA14; GATA6; GATA5	Not Available	50.65%
Matrix_96	TMO6	Not Available	50.61%
Matrix_70	GATA26	Not Available	50.60%
Matrix_16	AT3G04450; PHL1	Not Available	50.55%
Matrix_52	ZAT18	Not Available	50.42%
Matrix_92	AT1G33760	Not Available	50.42%
Matrix_174	ZAT2	Not Available	50.42%
Matrix_500	WRKY43	Not Available	50.31%
Matrix_355	ERF10; ERF11	Not Available	50.28%
Matrix_236	CCA1	Not Available	50.18%
Motif_312	OCTAMERMOTIFTAH3H4	Octamer motif found in promoter of wheat histone genes H3 and H4, and corn histone genes H3 and H4; Arabidopsis histone H4; histone-specific octamer; About half of the Oct motifs are present together with another element, HexA, TCA or CCAAT-box, forming OCES (Oct-containing composite elements); Nucleotide sequences of two corn histone H3 genes. Genomic organization of the corn histone H3 and H4 genes	50.17%
Matrix_377	AT1G75490; DREB2C; AT2G40350; AT5G18450	Not Available	50.16%
Matrix_113	ABI5	Not Available	50.15%
Matrix_431	ATHB21; HB-3	Not Available	50.14%
Matrix_442	AT5G62260	Not Available	50.14%
Matrix_327	ARR11	Not Available	50.14%
Matrix_444	AT1G19485; AT4G17950	Not Available	50.07%
Matrix_114	EPR1; AT3G10113	Not Available	50.06%
Matrix_151	ASIL1	Not Available	50.05%