PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_346
Name: AtMYB70; MYB73
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_490	AtMYB77; ATMYB44	Not Available	87.15%
Matrix_223	MYB60; ATMYB31; ATMYB30; MYB94; MYBCOV1	Not Available	66.64%
Motif_336	MYBMOUSE	Binding site for mouse c-myb protein	66.36%
Motif_221	MYBCORE	Binding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesis	66.09%
Motif_626	ACGTTBOX	T-box according to the nomenclature of ACGT elements; One of ACGT elements; See also ACGTABOX,ACGTCBOX, and CACGTGMOTIF	61.37%
Motif_344	MSACRCYM	MSA (M-specific activator) motif in Catharanthus roseus B-type cyclin (CYM) promoter; Essential for M phase-specific expression; Found at -66 to -58	61.20%
Motif_214	TAC1	Regulation of telomerase in Arabidopsis by BT2, an apparent target of TELOMERASE ACTIVATOR1	60.39%
Matrix_313	ATMYB65; MYB33	Not Available	60.01%
Motif_421	TAC1	Regulation of telomerase in Arabidopsis by BT2, an apparent target of TELOMERASE ACTIVATOR1	59.49%
Motif_251	SUP	The Arabidopsis SUPERMAN protein is able to specifically bind DNA through its single Cys2-His2 zinc finger motif	59.27%
Matrix_371	MYB7; AtMYB6; AtMYB32; ATMYB4	Not Available	59.18%
Matrix_318	ATHB16	Not Available	58.14%
Motif_86	ACGTABOX	A-box according to the nomenclature of ACGT elements; One of ACGT elements; Found in ocs gene; RITA-1 binding site; G motif; G motif and TATCCAY motif (a GATA motif as its antisense sequence) are responsible for sugar repression	58.12%
Matrix_65	POC1; PIL1	Not Available	57.85%
Motif_37	AtERF-4	Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression	57.75%
Matrix_242	AT2G25820; AT3G16280; AT4G32800; TINY2; tny	Not Available	57.48%
Motif_357	NTBBF1ARROLB	NtBBF1(Dof protein from tobacco) binding site in Agrobacterium rhizogenes rolB gene; Found in regulatory domain B (-341 to -306); Required for tissue-specific expression and auxin induction	57.47%
Matrix_155	RAP2.6; ERF110; ABR1	Not Available	57.47%
Motif_308	SP8BFIBSP8AIB	One of SPBF binding site (SP8a); Found at -155 of gSPO-A1 (sporamin) gene, and also at -880 of gB-Amy (beta-amylase) gene in sweet potato; SP8BF recognizes both SP8a and SP8b sequences; See also SP8BFIBSP8BIB; SP8BF activity is also found in tobacco; SP8a found in the 5' upstream region of three differnt genes coding for sporamin and beta-amylase; Binding site of SPF1; SPF1 also binds to the SP8b	57.46%
Motif_51	MYB46	Identification of a cis-acting regulatory motif recognized by MYB46, a master transcriptional regulator of secondary wall biosynthesis	57.01%
Motif_625	AtERF-4; AtERF-3	Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression	56.89%
Matrix_27	ATAIB; ATNIG1	Not Available	56.10%
Matrix_164	AT1G02030; AT2G45120; AZF2; AT3G60580	Not Available	55.18%
Matrix_478	AT1G01250	Not Available	55.10%
Motif_453	HEXMOTIFTAH3H4	hexamer motif found in promoter of wheat histone genes H3 and H4; CaMV35S; NOS; Binding with HBP-1A and HBP-1B; Binding site of wheat nuclear protein HBP-1 (histone DNA binding protein-1); HBP-1 has a leucine zipper motif; hexamer motif in type 1 element may play important roles in regulation of replication- dependent but not of replication-independent expression of the wheat histone H3 gene;Rice OBF1-homodimer-binding site	55.03%
Motif_339	ABRE-like binding site motif	Molecular responses to dehydration and low temperature	54.88%
Motif_323	MYB1LEPR	Tomato Pti4(ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1(GTTAGTT), G box (CACGTG))	54.59%
Motif_354	VSF1PVGRP18	VSF-1 binding site in French bean grp1.8 gene promoter; VSF-1 is a tomato bZIP transcription factor; VSF-1 binding site is found in 28 bp vs-1 element; This sequence controls vascular gene expression in transgenic tobacco; VS-1 found in bean grp1.8 gene promoter; Located between -203 and -176; Partially overlaps with NRE; Confers xylem-specific expression	54.50%
Motif_33	ACGTCBOX	C-box according to the nomenclature of ACGT elements; One of ACGT elements; Factors groups 1, 2 and 3 have affinity for C-box;RITA-1 binding site	54.45%
Matrix_436	AT3G49930; AZF1	Not Available	54.42%
Matrix_73	DEAR3; RAP2.9; RAP2.10	Not Available	54.23%
Motif_212	GARE2OSREP1	Gibberellin-responsive element (GARE) found in the promoter region of a cystein proteinase (REP-1) gene in rice	54.07%
Matrix_300	bZIP68; bZIP16	Not Available	53.94%
Matrix_296	GBF2	Not Available	53.61%
Matrix_198	STZ; C2H2; AZF3	Not Available	53.56%
Motif_244	ABRE-like binding site motif	Not Available	53.01%
Matrix_139	OBF5	Not Available	52.61%
Matrix_62	HAT5	Not Available	52.12%
Matrix_484	ATERF13	Not Available	52.10%
Matrix_45	DRN	Not Available	52.04%
Matrix_239	AT5G04390	Not Available	51.74%
Motif_567	T/GBOXATPIN2	T/G-box found in tomato proteinase inhibitor II (pin2) and leucine aminopeptidase (LAP) genes; Involved in jasmonate (JA) induction of these genes; bHLH-Leu zipper JAMYC2 and JAMYC10 proteins specifically recognize this motif	51.60%
Matrix_377	AT1G75490; DREB2C; AT2G40350; AT5G18450	Not Available	51.57%
Matrix_503	AT2G37430; AT3G53600	Not Available	51.36%
Matrix_395	AT1G19210; ORA47; AT4G31060; AT5G21960	Not Available	50.67%
Motif_17	AUXRETGA1GMGH3	TGA-box #1 in putative auxin-resonsive element (AUXRE) of soybean GH3 promoter; Strong binding site for proteins in plant nuclear extracts	50.67%
Motif_685	PALINDROMICCBOXGM	Palindromic C-box in soybean;bZIP factors, STGA1 and STFs (STF1 and STF2) found in soybean apical hypocotyl, bind to this sequence	50.67%
Motif_210	REBETALGLHCB21	REbeta found in Lemna gibba Lhcb21 gene promoter; Located at -114 to -109; A GATA sequence created at a position six nucleotides upstream could replace the function of REbeta; Required for phytochrome regulation	50.57%
Matrix_147	ERF3; AT1G80580	Not Available	50.41%
Matrix_379	RHL41	Not Available	50.27%
Matrix_126	RBE	Not Available	50.26%
Motif_261	S1FBOXSORPS1L21	S1F box conserved both in spinach RPS1 and RPL21 genes encoding the plastid ribosomal protein S1 and L21, respectively; Negative element; Might play a role in downregulating RPS1 and RPL21 promoter activity	50.17%
Motif_349	QARBNEXTA	QAR (quantitative activator region) in promoter region of Brassica napus extA extensin gene	50.13%