PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_343
Name: AT2G33710
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_234	RAP2.3	Not Available	88.22%
Matrix_378	ATERF1	Not Available	86.79%
Matrix_473	RRTF1	Not Available	84.84%
Matrix_287	ERF2	Not Available	84.13%
Matrix_146	ORA47	Not Available	82.48%
Matrix_252	RAP2.6	Not Available	81.69%
Matrix_101	ERF5	Not Available	80.93%
Matrix_272	DEAR4	Not Available	80.81%
Matrix_91	CRF3	Not Available	78.85%
Matrix_190	ATERF1	Not Available	78.31%
Matrix_493	AT1G22985; AT1G71130	Not Available	77.98%
Matrix_261	ATERF-1	Not Available	77.61%
Matrix_321	HRD	Not Available	75.82%
Matrix_377	AT1G75490; DREB2C; AT2G40350; AT5G18450	Not Available	74.55%
Matrix_45	DRN	Not Available	73.58%
Matrix_506	DRNL; ATERF-4	Not Available	72.29%
Matrix_484	ATERF13	Not Available	72.02%
Matrix_50	ATERF14; AT5G43410	Not Available	71.75%
Matrix_86	CRF5; CRF6; CRF4	Not Available	71.40%
Matrix_426	CRF1; CRF2	Not Available	71.32%
Matrix_362	DEAR3	Not Available	71.06%
Matrix_147	ERF3; AT1G80580	Not Available	70.85%
Matrix_363	RAP2.3	Not Available	70.48%
Matrix_374	AT5G07580; AT5G61590	Not Available	70.31%
Matrix_295	ERF1	Not Available	69.95%
Matrix_355	ERF10; ERF11	Not Available	69.57%
Matrix_334	AT3G23230	Not Available	69.42%
Matrix_326	AT5G07310; Rap2.6L; AT5G61890	Not Available	68.74%
Matrix_409	DEAR3	Not Available	68.47%
Matrix_288	RAP2.3	Not Available	68.35%
Matrix_138	RRTF1	Not Available	67.45%
Matrix_360	ORA59	Not Available	67.32%
Matrix_59	AT4G00238; AT4G00250	Not Available	67.29%
Matrix_171	LBD3; LBD4	Not Available	67.15%
Matrix_119	RRTF1	Not Available	67.11%
Matrix_224	ERF1	Not Available	66.97%
Matrix_280	TCP24; TCP1; BRC2; ATTCP18	Not Available	66.75%
Matrix_452	MYB46	Not Available	66.45%
Matrix_3	WRKY48	Not Available	66.37%
Matrix_256	IXR11; KNAT5; KNAT4; KNAT3	Not Available	65.25%
Matrix_263	WRKY33; WRKY19; WRKY32	Not Available	64.99%
Matrix_196	TCP20; AT5G41030	Not Available	64.98%
Matrix_418	KNAT6; KNAT2	Not Available	64.84%
Motif_50	AtERF-7; AtERF-4; AtERF-3; AtERF-1; AtERF-2; AtERF-5	Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression. Role of an Arabidopsis AP2/EREBP-type transcriptional repressor in abscisic acid and drought stress responses	64.67%
Matrix_277	RAP2.6	Not Available	64.60%
Motif_60	AtERF-4; AtERF-3	Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression	64.28%
Matrix_448	ATERF6	Not Available	64.17%
Matrix_450	SPL7	Not Available	64.08%
Matrix_57	WIN1; SHN3; SHN2	Not Available	64.03%
Matrix_489	RAV1	Not Available	63.91%
Matrix_75	WRKY29	Not Available	63.77%
Matrix_454	AT1G77200; ATERF38; AT4G16750; AT5G52020	Not Available	63.75%
Matrix_373	E2FE	Not Available	63.73%
Matrix_102	WRKY21	Not Available	63.68%
Matrix_370	WRKY50; WRKY51	Not Available	63.62%
Matrix_5	AT5G51190; ERF104	Not Available	63.33%
Matrix_151	ASIL1	Not Available	63.27%
Matrix_405	DREB2C	Not Available	63.23%
Matrix_331	GBF1	Not Available	63.13%
Matrix_209	RAP2.6	Not Available	63.05%
Matrix_169	E2F1	Not Available	62.96%
Matrix_433	ATERF1	Not Available	62.92%
Matrix_109	GBF3	Not Available	62.91%
Motif_457	AtERF-4; AtERF-3; AtERF-1; AtERF-2; AtERF-5	Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression	62.86%
Matrix_517	ERF12	Not Available	62.52%
Matrix_17	WRKY22	Not Available	62.39%
Matrix_313	ATMYB65; MYB33	Not Available	62.34%
Matrix_507	TCP3	Not Available	62.29%
Matrix_384	ATWRKY17	Not Available	62.27%
Matrix_312	ARF11; MP; ARF6; IAA21; ARF8; ARF4	Not Available	62.22%
Matrix_344	ATERF15; AT4G18450	Not Available	62.00%
Matrix_155	RAP2.6; ERF110; ABR1	Not Available	61.88%
Motif_625	AtERF-4; AtERF-3	Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression	61.82%
Matrix_183	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	61.65%
Matrix_207	WRKY10; WRKY57; AT2G44745; ATWRKY13; WRKY49	Not Available	61.53%
Matrix_285	DDF1	Not Available	61.23%
Matrix_232	TCP23	Not Available	61.16%
Matrix_141	AT3G25990	Not Available	61.14%
Matrix_508	APL; AT3G12730; AT3G24120; UNE16	Not Available	61.14%
Matrix_206	CUC1; ANAC100	Not Available	61.14%
Matrix_296	GBF2	Not Available	61.04%
Matrix_69	AT2G03500	Not Available	60.88%
Matrix_457	TGA2	Not Available	60.82%
Matrix_395	AT1G19210; ORA47; AT4G31060; AT5G21960	Not Available	60.57%
Matrix_243	RAP2.12; RAP2.2	Not Available	60.57%
Matrix_482	AT2G25650; AT4G00270	Not Available	60.48%
Matrix_162	AtPHR1	Not Available	60.42%
Matrix_187	CDC5	Not Available	60.37%
Matrix_349	CDC5	Not Available	60.37%
Matrix_322	NST3; ANAC015; BRN2	Not Available	60.27%
Matrix_41	anac058	Not Available	60.24%
Matrix_423	AT3G04030	Not Available	59.95%
Matrix_300	bZIP68; bZIP16	Not Available	59.89%
Matrix_14	ZCW32; AT5G62610	Not Available	59.74%
Matrix_475	AT5G64220	Not Available	59.73%
Matrix_415	WRKY27	Not Available	59.67%
Matrix_259	AT1G50680; AT1G51120	Not Available	59.55%
Matrix_61	ATCBF3	Not Available	59.52%
Matrix_227	AT1G64620	Not Available	59.52%
Matrix_297	TCP15	Not Available	59.46%
Motif_37	AtERF-4	Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression	59.38%
Matrix_328	AT1G76580	Not Available	59.27%
Matrix_110	ATABI4; AT3G57600	Not Available	59.27%
Matrix_80	BIM1	Not Available	59.19%
Matrix_491	AT1G68670; AT3G25790	Not Available	59.18%
Matrix_144	AT5G08330; AT5G23280	Not Available	59.15%
Motif_577	GRAZMRAB28	GRA; GC-rich rab activator; Found in the promoter of ABA responsive rab28 gene from maize; Similar (seven of 12 bases) to the GRA element from the maize rab17 promoter (GRAZMRAB17); Found at -138 to -130	58.99%
Matrix_92	AT1G33760	Not Available	58.94%
Matrix_389	ILR3	Not Available	58.86%
Matrix_12	EIN3; EIL2	Not Available	58.50%
Matrix_73	DEAR3; RAP2.9; RAP2.10	Not Available	58.32%
Matrix_244	DREB2C	Not Available	58.29%
Matrix_16	AT3G04450; PHL1	Not Available	58.19%
Matrix_220	WRKY18	Not Available	58.12%
Matrix_197	NAP	Not Available	57.90%
Matrix_333	GATA3	Not Available	57.88%
Matrix_202	WRKY71; WRKY28; WRKY8	Not Available	57.81%
Matrix_463	HAT3.1	Not Available	57.72%
Matrix_478	AT1G01250	Not Available	57.70%
Matrix_53	MYC3	Not Available	57.68%
Matrix_174	ZAT2	Not Available	57.65%
Matrix_226	GATA1	Not Available	57.52%
Matrix_44	CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2	Not Available	57.18%
Matrix_242	AT2G25820; AT3G16280; AT4G32800; TINY2; tny	Not Available	57.17%
Matrix_120	BEE2	Not Available	57.15%
Matrix_40	TCP2	Not Available	57.08%
Matrix_380	ATMYR1	Not Available	56.98%
Matrix_84	AtGRF6	Not Available	56.74%
Matrix_70	GATA26	Not Available	56.52%
Matrix_361	AT1G25550	Not Available	56.50%
Matrix_188	SPL4	Not Available	56.33%
Matrix_286	GATA7	Not Available	56.30%
Matrix_394	DREB_U	Not Available	56.26%
Matrix_472	ZN_C2_H2	Not Available	56.19%
Matrix_156	POC1	Not Available	56.17%
Matrix_316	WRKY15; WRKY39; WRKY7; WRKY74	Not Available	56.11%
Matrix_283	GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC	Not Available	56.10%
Matrix_229	CDC5	A cdc5+ homolog of a higher plant, Arabidopsis thaliana	56.09%
Matrix_158	AT1G03040; LRL1; UNE12; LRL2; LRL3	Not Available	55.98%
Matrix_324	AT2G01060	Not Available	55.90%
Matrix_193	RAV1	Not Available	55.78%
Matrix_265	NGA3	Not Available	55.78%
Matrix_323	BIM3	Not Available	55.74%
Matrix_330	MYC2; TT8	Not Available	55.71%
Motif_97	E2Fc; E2Fd	The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants	55.68%
Matrix_465	MYC4	Not Available	55.55%
Matrix_399	TGA1	Not Available	55.51%
Matrix_406	ATERF-7	Not Available	55.45%
Motif_368	CBF1 BS in cor15a	Determinants in the sequence specific binding of two plant transcription factors, CBF1 and NtERF2, to the DRE and GCC motifs	55.40%
Motif_191	AtERF-4; AtERF-3	Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression	55.38%
Matrix_249	WRKY11	Not Available	55.33%
Matrix_308	INO	Not Available	55.24%
Matrix_195	GATA2; GATA4	Not Available	55.15%
Matrix_420	ANAC58	Not Available	55.14%
Matrix_221	SPL7	Not Available	55.10%
Matrix_260	CAMTA3	Not Available	55.09%
Matrix_210	ARR1	Not Available	54.88%
Matrix_97	APRR2	Not Available	54.85%
Motif_602	E2Fc; E2Fd	The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants	54.82%
Matrix_268	EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105	Not Available	54.80%
Matrix_500	WRKY43	Not Available	54.74%
Motif_402	AtTINY2	Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana	54.67%
Matrix_4	ARR14	Not Available	54.63%
Matrix_385	DEAR4	Not Available	54.61%
Matrix_186	FHY3	Not Available	54.60%
Matrix_469	NAC041; NAC083	Not Available	54.56%
Matrix_142	ZFP8	Not Available	54.51%
Matrix_467	RAV1	Not Available	54.45%
Matrix_34	RAV1_2	RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants	54.45%
Matrix_477	RAV1	Not Available	54.45%
Matrix_23	ANAC46	Not Available	54.44%
Motif_371	DRE-like promoter motif	The Expression Profile Matrix of Arabidopsis Transcription Factor Genes Suggests Their Putative Functions in Response to Environmental Stresses	54.42%
Matrix_462	ATERF-8	Not Available	54.29%
Matrix_231	HDG2; HDG3; ATML1; HB-7	Not Available	54.27%
Motif_320	AGCBOXNPGLB	AGC box repeated twice in a 61 bp enhancer element in tobacco class I beta-1,3-glucanase (GLB) gene;GCC-box; Binding sequence of Arabidopsis AtERFs; AtERF1,2 and 5 functioned as activators of GCC box-dependent transcription; AtERF3 and 4 acted as repressors; AtERF proteins are stress signal-response factors; EREBP2 binding site; Conserved in most PR-protein genes; Rice MAPK (BWMK1) phosphorylates OS EREBP1, which enhance DNA-binding activity of the factor to the GCC box	54.26%
Matrix_37	GATA27	Not Available	54.18%
Matrix_504	WRKY40	Not Available	53.99%
Matrix_449	BIM2	Not Available	53.94%
Matrix_348	AT5G51910	Not Available	53.90%
Matrix_314	WRKY65; WRKY14; WRKY35; WRKY69; WRKY16; ATWRKY52	Not Available	53.79%
Matrix_113	ABI5	Not Available	53.76%
Matrix_154	AT1G22190; AT1G36060; AT1G64380; RAP2.4; AT2G20880; AT2G22200; AT4G13620; AT4G28140; AT4G39780; AT5G65130	Not Available	53.73%
Matrix_85	SPL5	Not Available	53.57%
Motif_372	E2FAT	E2F-binding site found in many potential E2F target genes; most potential E2F targets identified in silico show a cell cycle-regulated expression	53.53%
Matrix_42	AT2G45680	Not Available	53.48%
Matrix_46	AT4G21895	Not Available	53.48%
Matrix_470	WRKY18	Not Available	53.42%
Matrix_38	SPL14	Not Available	53.33%
Matrix_143	GATA14; GATA6; GATA5	Not Available	53.16%
Matrix_230	ARR11	Not Available	53.10%
Matrix_307	RGL2; RGL3	Not Available	52.99%
Matrix_200	PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815	Not Available	52.96%
Matrix_284	KAN2; KAN3; KAN; KAN4	Not Available	52.94%
Matrix_456	bZIP60	Not Available	52.89%
Matrix_241	HB-1; AT5G44180	Not Available	52.77%
Matrix_350	ARR14	Not Available	52.63%
Matrix_480	BES1	Not Available	52.54%
Matrix_78	AT3G45610	Not Available	52.53%
Motif_13	E2F-varient binding site motif	A genome-wide identification of E2F-regulated genes in Arabidopsis	52.47%
Matrix_152	EIL1; AT5G65100	Not Available	52.32%
Matrix_416	ASL5	Not Available	52.32%
Matrix_148	WRKY60	Not Available	52.31%
Motif_94	UP1ATMSD	Up1 motif found in 162 of the 1184 up-regulated genes after main stem decapitation in Arabidopsis	52.30%
Matrix_271	AT3G16350	Not Available	52.21%
Matrix_408	GATA12	Not Available	52.08%
Matrix_293	WRKY38	Not Available	52.03%
Matrix_173	ZAP1	Not Available	52.01%
Motif_255	B2GMAUX28	B2; DNase I protected sequence found in the soybean auxin responsive gene, Aux28, promoter; Located between -310 and -301; Contains a TGACGACA sequence which is similar to TGACGT/C sequence found in Ocs, CaMV35S and histone H3 promoter; Contains as-1 motif	51.99%
Matrix_336	AT5G08520	Not Available	51.92%
Matrix_492	ETT	Not Available	51.90%
Matrix_422	TOE1	Not Available	51.87%
Matrix_180	SPL1	Not Available	51.82%
Matrix_216	TCP16	Not Available	51.76%
Matrix_266	TCP16	Determinants of the DNA binding specificity of class I and class II TCP transcription factors	51.68%
Matrix_122	ABF1; AREB2	Not Available	51.68%
Matrix_52	ZAT18	Not Available	51.42%
Motif_99	DREB1A; DREB1C; DREB1B	Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems;Low temperature regulation of the Arabidopsis CBF family of AP2 transcriptional activators as an early step in cold-induced COR gene expression;Arabidopsis thaliana CBF1 encodes an AP2 domain-containing transcriptional activator that binds to the C-repeat/DRE, a cis-acting DNA regulatory element that stimulates transcription in response to low temperature and water deficit	51.37%
Matrix_175	Dof5.7	Not Available	51.36%
Matrix_398	TBP2; ATTRB2	Not Available	51.11%
Motif_636	AMMORESVDCRNIA1	Motif (VD) found in the Chlamydomonas Nia1 gene promoter; Located between -33 and -8; Involved in Nia1 transcription activation	51.08%
Matrix_257	NAC050; ANAC051; anac057; NAC2	Not Available	51.02%
Motif_313	ERF1 BS in AtCHI-B	Core of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperature	50.97%
Matrix_317	AT1G06070; AT2G31370; AT2G40620	Not Available	50.87%
Matrix_26	ATMYB3; MYB24	Not Available	50.83%
Matrix_515	ddf2; ATCBF3; CBF1; CBF4	Not Available	50.74%
Motif_318	CGCGBOXAT	CGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRs	50.69%
Matrix_505	GATA8	Not Available	50.69%
Matrix_253	ETT	Not Available	50.65%
Motif_509	AtTINY2	Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana	50.59%
Matrix_352	LEC2	Not Available	50.53%
Matrix_8	KAN1	Not Available	50.51%
Matrix_129	ABF1	Not Available	50.41%
Matrix_1	TOE2	Not Available	50.35%
Matrix_223	MYB60; ATMYB31; ATMYB30; MYB94; MYBCOV1	Not Available	50.29%
Matrix_56	BZIP17; BZIP28; BZIP49	Not Available	50.29%
Matrix_306	TGA1	TGA1 and G-box binding factors: two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGG	50.28%
Matrix_199	AT1G69170; SPL9; SPL15; SPL13A; SPL13B	Not Available	50.21%
Matrix_72	CDF2	Not Available	50.19%
Matrix_393	REM1	Not Available	50.13%
Matrix_135	ABI3	Not Available	50.06%
Matrix_31	SPL1	Not Available	50.05%
Matrix_33	SPL11; SPL10; SPL2	Not Available	50.04%